RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 ZNF592Q92610 1267 aa13.73□□□□□ -0.21
SPOCK1-207ENST00000509978 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
SPOCK1-207ENST00000509978 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
SPOCK1-207ENST00000509978 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
SPOCK1-207ENST00000509978 GPSM3Q9Y4H4 160 aa13.72□□□□□ -0.21
SPOCK1-207ENST00000509978 NR1I2O75469 434 aa13.71□□□□□ -0.21
SPOCK1-207ENST00000509978 JUNDP17535 347 aa13.71□□□□□ -0.21
SPOCK1-207ENST00000509978 MCCD1P59942 119 aaPredicted RBP13.71□□□□□ -0.21
SPOCK1-207ENST00000509978 ST18O60284 1047 aa13.7□□□□□ -0.22
SPOCK1-207ENST00000509978 IVNS1ABPQ9Y6Y0 642 aa13.7□□□□□ -0.22
SPOCK1-207ENST00000509978 HRO43593 1189 aa13.69□□□□□ -0.22
SPOCK1-207ENST00000509978 PPP4CP60510 307 aa13.69□□□□□ -0.22
SPOCK1-207ENST00000509978 ADGRD1Q6QNK2 874 aa13.69□□□□□ -0.22
SPOCK1-207ENST00000509978 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
SPOCK1-207ENST00000509978 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
SPOCK1-207ENST00000509978 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
SPOCK1-207ENST00000509978 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 USP17L2Q6R6M4 530 aa13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 SND1Q7KZF4 910 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 ARMC2Q8NEN0 867 aa13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 ANKK1Q8NFD2 765 aa13.67□□□□□ -0.22
SPOCK1-207ENST00000509978 APLP1P51693 650 aa13.66□□□□□ -0.22
SPOCK1-207ENST00000509978 PDXDC2PQ6P474 469 aa13.66□□□□□ -0.22
SPOCK1-207ENST00000509978 MAP10Q9P2G4 905 aa13.66□□□□□ -0.22
SPOCK1-207ENST00000509978 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 USP17L5A8MUK1 530 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 LZTS3O60299 673 aaPredicted RBP13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 SKIP12755 728 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 LSM11P83369 360 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 ZMIZ1Q9ULJ6 1067 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
SPOCK1-207ENST00000509978 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
SPOCK1-207ENST00000509978 PTK2Q05397 1052 aa13.64□□□□□ -0.23
SPOCK1-207ENST00000509978 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
SPOCK1-207ENST00000509978 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
SPOCK1-207ENST00000509978 MARVELD3Q96A59 401 aa13.63□□□□□ -0.23
SPOCK1-207ENST00000509978 NOVA2Q9UNW9 492 aaKnown RBP13.63□□□□□ -0.23
SPOCK1-207ENST00000509978 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
SPOCK1-207ENST00000509978 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
SPOCK1-207ENST00000509978 TMEM164Q5U3C3 297 aa13.62□□□□□ -0.23
SPOCK1-207ENST00000509978 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
SPOCK1-207ENST00000509978 PHTF2Q8N3S3 785 aa13.62□□□□□ -0.23
SPOCK1-207ENST00000509978 FOXD4L4Q8WXT5 416 aaPredicted RBP13.62□□□□□ -0.23
SPOCK1-207ENST00000509978 AMOTL2Q9Y2J4 779 aa13.62□□□□□ -0.23
SPOCK1-207ENST00000509978 DXOO77932 396 aaKnown RBP13.61□□□□□ -0.23
SPOCK1-207ENST00000509978 CTHP32929 405 aa13.61□□□□□ -0.23
SPOCK1-207ENST00000509978 FAM174AQ8TBP5 190 aa13.61□□□□□ -0.23
SPOCK1-207ENST00000509978 GOLGA8CPA6NN73 597 aa13.6□□□□□ -0.23
SPOCK1-207ENST00000509978 MMP16P51512 607 aa13.6□□□□□ -0.23
SPOCK1-207ENST00000509978 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
SPOCK1-207ENST00000509978 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
SPOCK1-207ENST00000509978 SLFNL1Q499Z3 407 aa13.59□□□□□ -0.23
SPOCK1-207ENST00000509978 STK32AQ8WU08 396 aa13.59□□□□□ -0.23
SPOCK1-207ENST00000509978 MKRN1Q9UHC7 482 aaKnown RBP13.59□□□□□ -0.23
SPOCK1-207ENST00000509978 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
SPOCK1-207ENST00000509978 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
SPOCK1-207ENST00000509978 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
SPOCK1-207ENST00000509978 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
SPOCK1-207ENST00000509978 FAM160A2Q8N612 972 aaPredicted RBP13.57□□□□□ -0.24
SPOCK1-207ENST00000509978 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
SPOCK1-207ENST00000509978 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
SPOCK1-207ENST00000509978 OCSTAMPQ9BR26 566 aa13.57□□□□□ -0.24
SPOCK1-207ENST00000509978 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L12C9JPN9 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L21D6R901 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 BCAMP50895 628 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 PTK7Q13308 1070 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 MAP7D1Q3KQU3 841 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
SPOCK1-207ENST00000509978 CRTC2Q53ET0 693 aaPredicted RBP13.55□□□□□ -0.24
SPOCK1-207ENST00000509978 LARP1Q6PKG0 1096 aaKnown RBP13.55□□□□□ -0.24
SPOCK1-207ENST00000509978 SPSB2Q99619 263 aa13.55□□□□□ -0.24
SPOCK1-207ENST00000509978 SSFA2P28290 1259 aa13.54□□□□□ -0.24
SPOCK1-207ENST00000509978 NCOA4Q13772 614 aa13.54□□□□□ -0.24
SPOCK1-207ENST00000509978 RNF135Q8IUD6 432 aa13.54□□□□□ -0.24
SPOCK1-207ENST00000509978 DEPDC4Q8N2C3 294 aa13.54□□□□□ -0.24
SPOCK1-207ENST00000509978 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
SPOCK1-207ENST00000509978 FAM69CQ0P6D2 419 aa13.53□□□□□ -0.24
SPOCK1-207ENST00000509978 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
SPOCK1-207ENST00000509978 RASA1P20936 1047 aa13.52□□□□□ -0.25
SPOCK1-207ENST00000509978 ARID4AP29374 1257 aaPredicted RBP13.52□□□□□ -0.25
SPOCK1-207ENST00000509978 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms