RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 IFT172Q9UG01 1749 aa15.23■□□□□ 0.03
MBD4-208ENST00000509828 TRIM37O94972 964 aa15.23■□□□□ 0.03
MBD4-208ENST00000509828 EZH2Q15910 746 aaKnown RBP15.23■□□□□ 0.03
MBD4-208ENST00000509828 RGPD8O14715 1765 aaPredicted RBP15.22■□□□□ 0.03
MBD4-208ENST00000509828 WASLO00401 505 aaPredicted RBP15.22■□□□□ 0.03
MBD4-208ENST00000509828 APBA3O96018 575 aa15.22■□□□□ 0.03
MBD4-208ENST00000509828 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
MBD4-208ENST00000509828 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
MBD4-208ENST00000509828 LRP5O75197 1615 aa15.21■□□□□ 0.03
MBD4-208ENST00000509828 PDE3BQ13370 1112 aa15.21■□□□□ 0.03
MBD4-208ENST00000509828 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
MBD4-208ENST00000509828 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
MBD4-208ENST00000509828 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
MBD4-208ENST00000509828 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
MBD4-208ENST00000509828 NBPF14Q5TI25 921 aa15.2■□□□□ 0.02
MBD4-208ENST00000509828 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
MBD4-208ENST00000509828 NUTM2GQ5VZR2 741 aa15.19■□□□□ 0.02
MBD4-208ENST00000509828 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
MBD4-208ENST00000509828 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
MBD4-208ENST00000509828 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
MBD4-208ENST00000509828 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
MBD4-208ENST00000509828 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
MBD4-208ENST00000509828 PPP1R1BQ9UD71 204 aaPredicted RBP15.17■□□□□ 0.02
MBD4-208ENST00000509828 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
MBD4-208ENST00000509828 CAMKK2Q96RR4 588 aa15.16■□□□□ 0.02
MBD4-208ENST00000509828 ABCA3Q99758 1704 aa15.16■□□□□ 0.02
MBD4-208ENST00000509828 RGPD1P0DJD0 1748 aa15.14■□□□□ 0.01
MBD4-208ENST00000509828 YY1P25490 414 aa15.14■□□□□ 0.01
MBD4-208ENST00000509828 TULP4Q9NRJ4 1543 aa15.13■□□□□ 0.01
MBD4-208ENST00000509828 ZBTB7CA1YPR0 619 aa15.13■□□□□ 0.01
MBD4-208ENST00000509828 NRAPQ86VF7 1730 aa15.13■□□□□ 0.01
MBD4-208ENST00000509828 PARD3Q8TEW0 1356 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 ADGRB2O60241 1585 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 DISP2A7MBM2 1401 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 ABTB2Q8N961 1025 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 STAC3Q96MF2 364 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 CDK19Q9BWU1 502 aa15.12■□□□□ 0.01
MBD4-208ENST00000509828 BARGINQ6ZT62 677 aa15.11■□□□□ 0.01
MBD4-208ENST00000509828 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
MBD4-208ENST00000509828 LARP1Q6PKG0 1096 aaKnown RBP15.1■□□□□ 0.01
MBD4-208ENST00000509828 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
MBD4-208ENST00000509828 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
MBD4-208ENST00000509828 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
MBD4-208ENST00000509828 ACEP12821 1306 aa15.09■□□□□ 0.01
MBD4-208ENST00000509828 ADGRB1O14514 1584 aa15.08■□□□□ 0
MBD4-208ENST00000509828 NLRP13Q86W25 1043 aa15.08■□□□□ 0
MBD4-208ENST00000509828 THSD7AQ9UPZ6 1657 aa15.07■□□□□ 0
MBD4-208ENST00000509828 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
MBD4-208ENST00000509828 RAB3GAP2Q9H2M9 1393 aa15.07■□□□□ 0
MBD4-208ENST00000509828 SSH2Q76I76 1423 aa15.07■□□□□ 0
MBD4-208ENST00000509828 KCNQ2O43526 872 aa15.06■□□□□ 0
MBD4-208ENST00000509828 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
MBD4-208ENST00000509828 THRAP3Q9Y2W1 955 aaKnown RBP15.06■□□□□ 0
MBD4-208ENST00000509828 ATP7BP35670 1465 aa15.06■□□□□ 0
MBD4-208ENST00000509828 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
MBD4-208ENST00000509828 TNS1Q9HBL0 1735 aaKnown RBP15.03■□□□□ -0
MBD4-208ENST00000509828 GCP02774 474 aa15.03■□□□□ -0
MBD4-208ENST00000509828 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
MBD4-208ENST00000509828 POLR3AO14802 1390 aaPredicted RBP15.01□□□□□ -0.01
MBD4-208ENST00000509828 NLRP6P59044 892 aa15.01□□□□□ -0.01
MBD4-208ENST00000509828 DDB1Q16531 1140 aa15.01□□□□□ -0.01
MBD4-208ENST00000509828 TOM1L2Q6ZVM7 507 aa15.01□□□□□ -0.01
MBD4-208ENST00000509828 ITSN1Q15811 1721 aa15□□□□□ -0.01
MBD4-208ENST00000509828 CPDO75976 1380 aa15□□□□□ -0.01
MBD4-208ENST00000509828 CAMTA1Q9Y6Y1 1673 aa15□□□□□ -0.01
MBD4-208ENST00000509828 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
MBD4-208ENST00000509828 CRYBG1Q9Y4K1 1723 aa14.98□□□□□ -0.01
MBD4-208ENST00000509828 CSB-PGBD3P0DP91 1061 aa14.98□□□□□ -0.01
MBD4-208ENST00000509828 PHRF1Q9P1Y6 1649 aaKnown RBP14.98□□□□□ -0.01
MBD4-208ENST00000509828 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
MBD4-208ENST00000509828 USP19O94966 1318 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 PLSCR1O15162 318 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 OVOS2A0A0G2JMS6 1433 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 OVOS2A0A0J9YW53 1432 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 CRB1P82279 1406 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 OVOS2Q6IE36 1432 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 PPIP5K1Q6PFW1 1433 aa14.97□□□□□ -0.01
MBD4-208ENST00000509828 ZBTB7AO95365 584 aa14.96□□□□□ -0.01
MBD4-208ENST00000509828 STK32BQ9NY57 414 aa14.96□□□□□ -0.01
MBD4-208ENST00000509828 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
MBD4-208ENST00000509828 CENPJQ9HC77 1338 aaPredicted RBP14.95□□□□□ -0.02
MBD4-208ENST00000509828 NBPF1Q3BBV0 1214 aa14.95□□□□□ -0.02
MBD4-208ENST00000509828 CDCA7Q9BWT1 371 aaPredicted RBP14.95□□□□□ -0.02
MBD4-208ENST00000509828 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
MBD4-208ENST00000509828 SOX12O15370 315 aa14.94□□□□□ -0.02
MBD4-208ENST00000509828 ARHGEF28Q8N1W1 1705 aaKnown RBP14.94□□□□□ -0.02
MBD4-208ENST00000509828 COL5A2P05997 1499 aaPredicted RBP14.94□□□□□ -0.02
MBD4-208ENST00000509828 NRKQ7Z2Y5 1582 aa14.94□□□□□ -0.02
MBD4-208ENST00000509828 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
MBD4-208ENST00000509828 EXOC5O00471 708 aa14.93□□□□□ -0.02
MBD4-208ENST00000509828 BRD4O60885 1362 aaPredicted RBP14.93□□□□□ -0.02
MBD4-208ENST00000509828 AATKQ6ZMQ8 1374 aa14.93□□□□□ -0.02
MBD4-208ENST00000509828 RREB1Q92766 1687 aa14.92□□□□□ -0.02
MBD4-208ENST00000509828 MARCH10Q8NA82 808 aaPredicted RBP14.91□□□□□ -0.02
MBD4-208ENST00000509828 KCNH5Q8NCM2 988 aa14.91□□□□□ -0.02
MBD4-208ENST00000509828 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
MBD4-208ENST00000509828 WDR17Q8IZU2 1322 aa14.91□□□□□ -0.02
MBD4-208ENST00000509828 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
MBD4-208ENST00000509828 PTF1AQ7RTS3 328 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms