RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 GPRASP1Q5JY77 1395 aa15.23■□□□□ 0.03
CYSTM1-203ENST00000509589 HRCP23327 699 aa15.22■□□□□ 0.03
CYSTM1-203ENST00000509589 BAG6P46379 1132 aa15.22■□□□□ 0.03
CYSTM1-203ENST00000509589 EN1Q05925 392 aaPredicted RBP15.22■□□□□ 0.03
CYSTM1-203ENST00000509589 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.03
CYSTM1-203ENST00000509589 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.03
CYSTM1-203ENST00000509589 THSD7AQ9UPZ6 1657 aa15.21■□□□□ 0.03
CYSTM1-203ENST00000509589 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
CYSTM1-203ENST00000509589 RGPD1P0DJD0 1748 aa15.2■□□□□ 0.02
CYSTM1-203ENST00000509589 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
CYSTM1-203ENST00000509589 WASLO00401 505 aaPredicted RBP15.19■□□□□ 0.02
CYSTM1-203ENST00000509589 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
CYSTM1-203ENST00000509589 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
CYSTM1-203ENST00000509589 ITSN1Q15811 1721 aa15.18■□□□□ 0.02
CYSTM1-203ENST00000509589 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-203ENST00000509589 R3HDM1Q15032 1099 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-203ENST00000509589 NGDNQ8NEJ9 315 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-203ENST00000509589 PRDM11Q9NQV5 511 aa15.18■□□□□ 0.02
CYSTM1-203ENST00000509589 EIF3AQ14152 1382 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-203ENST00000509589 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
CYSTM1-203ENST00000509589 CHRNA2Q15822 529 aa15.17■□□□□ 0.02
CYSTM1-203ENST00000509589 DCAF11Q8TEB1 546 aa15.17■□□□□ 0.02
CYSTM1-203ENST00000509589 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
CYSTM1-203ENST00000509589 ATP7BP35670 1465 aa15.16■□□□□ 0.02
CYSTM1-203ENST00000509589 SPATA31A1Q5TZJ5 1347 aa15.16■□□□□ 0.02
CYSTM1-203ENST00000509589 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
CYSTM1-203ENST00000509589 EZH2Q15910 746 aaKnown RBP15.15■□□□□ 0.02
CYSTM1-203ENST00000509589 NUTM2GQ5VZR2 741 aa15.14■□□□□ 0.01
CYSTM1-203ENST00000509589 STRN4Q9NRL3 753 aa15.14■□□□□ 0.01
CYSTM1-203ENST00000509589 TRIM37O94972 964 aa15.13■□□□□ 0.01
CYSTM1-203ENST00000509589 ZC3H6P61129 1189 aaKnown RBP15.13■□□□□ 0.01
CYSTM1-203ENST00000509589 NUDT16Q96DE0 195 aaKnown RBP15.13■□□□□ 0.01
CYSTM1-203ENST00000509589 CAMKK2Q96RR4 588 aa15.12■□□□□ 0.01
CYSTM1-203ENST00000509589 USP35Q9P2H5 1018 aa15.11■□□□□ 0.01
CYSTM1-203ENST00000509589 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
CYSTM1-203ENST00000509589 SSH2Q76I76 1423 aa15.09■□□□□ 0.01
CYSTM1-203ENST00000509589 FAM196AQ6ZSG2 479 aa15.09■□□□□ 0.01
CYSTM1-203ENST00000509589 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
CYSTM1-203ENST00000509589 NRKQ7Z2Y5 1582 aa15.09■□□□□ 0.01
CYSTM1-203ENST00000509589 CAMTA1Q9Y6Y1 1673 aa15.09■□□□□ 0.01
CYSTM1-203ENST00000509589 APBA3O96018 575 aa15.08■□□□□ 0
CYSTM1-203ENST00000509589 ACEP12821 1306 aa15.08■□□□□ 0
CYSTM1-203ENST00000509589 POLR3AO14802 1390 aaPredicted RBP15.08■□□□□ 0
CYSTM1-203ENST00000509589 NBPF8Q3BBV2 869 aa15.07■□□□□ 0
CYSTM1-203ENST00000509589 LARP1Q6PKG0 1096 aaKnown RBP15.07■□□□□ 0
CYSTM1-203ENST00000509589 LMO7Q8WWI1 1683 aa15.06■□□□□ 0
CYSTM1-203ENST00000509589 RREB1Q92766 1687 aa15.06■□□□□ 0
CYSTM1-203ENST00000509589 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
CYSTM1-203ENST00000509589 EVA1CP58658 441 aa15.05■□□□□ -0
CYSTM1-203ENST00000509589 BARGINQ6ZT62 677 aa15.05■□□□□ -0
CYSTM1-203ENST00000509589 USP19O94966 1318 aa15.04■□□□□ -0
CYSTM1-203ENST00000509589 PDE3BQ13370 1112 aa15.04■□□□□ -0
CYSTM1-203ENST00000509589 STAC3Q96MF2 364 aa15.04■□□□□ -0
CYSTM1-203ENST00000509589 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
CYSTM1-203ENST00000509589 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
CYSTM1-203ENST00000509589 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
CYSTM1-203ENST00000509589 TCP11L2Q8N4U5 519 aa15.03■□□□□ -0
CYSTM1-203ENST00000509589 ABTB2Q8N961 1025 aa15.03■□□□□ -0
CYSTM1-203ENST00000509589 CPDO75976 1380 aa15.02■□□□□ -0
CYSTM1-203ENST00000509589 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
CYSTM1-203ENST00000509589 ZBTB7CA1YPR0 619 aa15.01□□□□□ -0.01
CYSTM1-203ENST00000509589 NBPF1Q3BBV0 1214 aa15.01□□□□□ -0.01
CYSTM1-203ENST00000509589 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
CYSTM1-203ENST00000509589 GCP02774 474 aa15□□□□□ -0.01
CYSTM1-203ENST00000509589 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
CYSTM1-203ENST00000509589 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
CYSTM1-203ENST00000509589 PARP4Q9UKK3 1724 aaKnown RBP14.99□□□□□ -0.01
CYSTM1-203ENST00000509589 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
CYSTM1-203ENST00000509589 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
CYSTM1-203ENST00000509589 CABP2Q9NPB3 220 aa14.98□□□□□ -0.01
CYSTM1-203ENST00000509589 PEAK1Q9H792 1746 aa14.97□□□□□ -0.01
CYSTM1-203ENST00000509589 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
CYSTM1-203ENST00000509589 NBPF14Q5TI25 921 aa14.97□□□□□ -0.01
CYSTM1-203ENST00000509589 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
CYSTM1-203ENST00000509589 THRAP3Q9Y2W1 955 aaKnown RBP14.97□□□□□ -0.01
CYSTM1-203ENST00000509589 CRB1P82279 1406 aa14.96□□□□□ -0.01
CYSTM1-203ENST00000509589 PTF1AQ7RTS3 328 aa14.96□□□□□ -0.01
CYSTM1-203ENST00000509589 SBF2Q86WG5 1849 aa14.95□□□□□ -0.02
CYSTM1-203ENST00000509589 WNK3Q9BYP7 1800 aa14.95□□□□□ -0.02
CYSTM1-203ENST00000509589 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 OVOS2A0A0G2JMS6 1433 aa14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 OVOS2A0A0J9YW53 1432 aa14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 USP6P35125 1406 aa14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 OVOS2Q6IE36 1432 aa14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 SLIT3O75094 1523 aa14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 YY1P25490 414 aa14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
CYSTM1-203ENST00000509589 UTRNP46939 3433 aa14.93□□□□□ -0.02
CYSTM1-203ENST00000509589 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
CYSTM1-203ENST00000509589 CABP1Q9NZU7 370 aa14.93□□□□□ -0.02
CYSTM1-203ENST00000509589 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
CYSTM1-203ENST00000509589 AKAP12Q02952 1782 aa14.93□□□□□ -0.02
CYSTM1-203ENST00000509589 KCNQ2O43526 872 aa14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 NLRP6P59044 892 aa14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 AXIN2Q9Y2T1 843 aa14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 AATKQ6ZMQ8 1374 aa14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 COL18A1P39060 1754 aa14.92□□□□□ -0.02
CYSTM1-203ENST00000509589 RGPD3A6NKT7 1758 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms