RNA–Protein interactions for RNA: ENST00000509534.5

SIL1-213, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene SIL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-213ENST00000509534 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
SIL1-213ENST00000509534 MYBBP1AQ9BQG0 1328 aaKnown RBP22.94■■□□□ 1.26
SIL1-213ENST00000509534 MORC1Q86VD1 984 aa22.94■■□□□ 1.26
SIL1-213ENST00000509534 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
SIL1-213ENST00000509534 FYB1O15117 783 aa22.94■■□□□ 1.26
SIL1-213ENST00000509534 PSME1Q06323 249 aa22.93■■□□□ 1.26
SIL1-213ENST00000509534 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
SIL1-213ENST00000509534 SLAIN2Q9P270 581 aa22.93■■□□□ 1.26
SIL1-213ENST00000509534 TTC21AQ8NDW8 1320 aa22.91■■□□□ 1.26
SIL1-213ENST00000509534 SSH2Q76I76 1423 aa22.91■■□□□ 1.26
SIL1-213ENST00000509534 FOXO3O43524 673 aa22.91■■□□□ 1.26
SIL1-213ENST00000509534 NME9Q86XW9 330 aa22.91■■□□□ 1.26
SIL1-213ENST00000509534 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
SIL1-213ENST00000509534 PAK3O75914 559 aaPredicted RBP22.88■■□□□ 1.25
SIL1-213ENST00000509534 NLRP13Q86W25 1043 aa22.88■■□□□ 1.25
SIL1-213ENST00000509534 TNNT2P45379 298 aaPredicted RBP22.87■■□□□ 1.25
SIL1-213ENST00000509534 BRINP3Q76B58 766 aa22.87■■□□□ 1.25
SIL1-213ENST00000509534 COG3Q96JB2 828 aa22.87■■□□□ 1.25
SIL1-213ENST00000509534 PPP2R1AP30153 589 aa22.86■■□□□ 1.25
SIL1-213ENST00000509534 PIK3C2AO00443 1686 aa22.86■■□□□ 1.25
SIL1-213ENST00000509534 XPCQ01831 940 aaPredicted RBP22.85■■□□□ 1.25
SIL1-213ENST00000509534 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
SIL1-213ENST00000509534 NPHP3Q7Z494 1330 aa22.85■■□□□ 1.25
SIL1-213ENST00000509534 KRT28Q7Z3Y7 464 aa22.85■■□□□ 1.25
SIL1-213ENST00000509534 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
SIL1-213ENST00000509534 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
SIL1-213ENST00000509534 PELP1Q8IZL8 1130 aaKnown RBP22.83■■□□□ 1.25
SIL1-213ENST00000509534 ABTB2Q8N961 1025 aa22.82■■□□□ 1.24
SIL1-213ENST00000509534 OVOS2A0A0J9YW53 1432 aa22.82■■□□□ 1.24
SIL1-213ENST00000509534 OVOS2Q6IE36 1432 aa22.82■■□□□ 1.24
SIL1-213ENST00000509534 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
SIL1-213ENST00000509534 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
SIL1-213ENST00000509534 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
SIL1-213ENST00000509534 USP31Q70CQ4 1352 aa22.8■■□□□ 1.24
SIL1-213ENST00000509534 NLRP6P59044 892 aa22.79■■□□□ 1.24
SIL1-213ENST00000509534 USP54Q70EL1 1684 aa22.79■■□□□ 1.24
SIL1-213ENST00000509534 ROBO1Q9Y6N7 1651 aa22.79■■□□□ 1.24
SIL1-213ENST00000509534 PXDNQ92626 1479 aa22.78■■□□□ 1.24
SIL1-213ENST00000509534 TOM1O60784 492 aa22.78■■□□□ 1.24
SIL1-213ENST00000509534 NHSL1Q5SYE7 1610 aa22.78■■□□□ 1.24
SIL1-213ENST00000509534 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.24
SIL1-213ENST00000509534 LMOD2Q6P5Q4 547 aa22.77■■□□□ 1.24
SIL1-213ENST00000509534 SBNO1A3KN83 1393 aa22.77■■□□□ 1.24
SIL1-213ENST00000509534 MARF1Q9Y4F3 1742 aaKnown RBP22.76■■□□□ 1.23
SIL1-213ENST00000509534 ALS2Q96Q42 1657 aa22.76■■□□□ 1.23
SIL1-213ENST00000509534 MAP2P11137 1827 aaKnown RBP22.76■■□□□ 1.23
SIL1-213ENST00000509534 TNS3Q68CZ2 1445 aa22.74■■□□□ 1.23
SIL1-213ENST00000509534 MTHFSP49914 203 aa22.74■■□□□ 1.23
SIL1-213ENST00000509534 CERKQ8TCT0 537 aa22.74■■□□□ 1.23
SIL1-213ENST00000509534 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
SIL1-213ENST00000509534 AATKQ6ZMQ8 1374 aa22.73■■□□□ 1.23
SIL1-213ENST00000509534 UBAP1LF5GYI3 381 aa22.72■■□□□ 1.23
SIL1-213ENST00000509534 SOX12O15370 315 aa22.72■■□□□ 1.23
SIL1-213ENST00000509534 SOS2Q07890 1332 aaPredicted RBP22.72■■□□□ 1.23
SIL1-213ENST00000509534 CFAP53Q96M91 514 aa22.71■■□□□ 1.23
SIL1-213ENST00000509534 FBLN1P23142 703 aa22.71■■□□□ 1.23
SIL1-213ENST00000509534 ARHGEF10O15013 1369 aa22.7■■□□□ 1.22
SIL1-213ENST00000509534 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
SIL1-213ENST00000509534 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
SIL1-213ENST00000509534 SPATA31A3Q5VYP0 1347 aa22.7■■□□□ 1.22
SIL1-213ENST00000509534 AHDC1Q5TGY3 1603 aaPredicted RBP22.69■■□□□ 1.22
SIL1-213ENST00000509534 PPM1GO15355 546 aaPredicted RBP22.68■■□□□ 1.22
SIL1-213ENST00000509534 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
SIL1-213ENST00000509534 RRS1Q15050 365 aaKnown RBP22.68■■□□□ 1.22
SIL1-213ENST00000509534 SMG6Q86US8 1419 aaKnown RBP22.67■■□□□ 1.22
SIL1-213ENST00000509534 PLEKHG5O94827 1062 aa22.67■■□□□ 1.22
SIL1-213ENST00000509534 PNISRQ8TF01 805 aaKnown RBP22.67■■□□□ 1.22
SIL1-213ENST00000509534 EMILIN1Q9Y6C2 1016 aa22.67■■□□□ 1.22
SIL1-213ENST00000509534 KCNH5Q8NCM2 988 aa22.66■■□□□ 1.22
SIL1-213ENST00000509534 SLIT3O75094 1523 aa22.66■■□□□ 1.22
SIL1-213ENST00000509534 USP19O94966 1318 aa22.65■■□□□ 1.22
SIL1-213ENST00000509534 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
SIL1-213ENST00000509534 WDR43Q15061 677 aaKnown RBP eCLIP22.65■■□□□ 1.22
SIL1-213ENST00000509534 PHLPP1O60346 1717 aa22.64■■□□□ 1.22
SIL1-213ENST00000509534 NFAT5O94916 1531 aa22.64■■□□□ 1.21
SIL1-213ENST00000509534 LTN1O94822 1766 aa22.63■■□□□ 1.21
SIL1-213ENST00000509534 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
SIL1-213ENST00000509534 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
SIL1-213ENST00000509534 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
SIL1-213ENST00000509534 MAP3K19Q56UN5 1328 aa22.62■■□□□ 1.21
SIL1-213ENST00000509534 PEAK1Q9H792 1746 aa22.61■■□□□ 1.21
SIL1-213ENST00000509534 COL3A1P02461 1466 aaPredicted RBP22.61■■□□□ 1.21
SIL1-213ENST00000509534 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
SIL1-213ENST00000509534 GCP02774 474 aa22.61■■□□□ 1.21
SIL1-213ENST00000509534 CRYBG1Q9Y4K1 1723 aa22.61■■□□□ 1.21
SIL1-213ENST00000509534 LRRC59Q96AG4 307 aaKnown RBP22.6■■□□□ 1.21
SIL1-213ENST00000509534 INSRP06213 1382 aa22.6■■□□□ 1.21
SIL1-213ENST00000509534 AMPHP49418 695 aa22.6■■□□□ 1.21
SIL1-213ENST00000509534 FLT4P35916 1363 aa22.58■■□□□ 1.21
SIL1-213ENST00000509534 DIAPH1O60610 1272 aaKnown RBP22.58■■□□□ 1.21
SIL1-213ENST00000509534 NUDCQ9Y266 331 aa22.58■■□□□ 1.21
SIL1-213ENST00000509534 COL16A1Q07092 1604 aaPredicted RBP22.58■■□□□ 1.2
SIL1-213ENST00000509534 KIF24Q5T7B8 1368 aa22.58■■□□□ 1.2
SIL1-213ENST00000509534 ZBTB7CA1YPR0 619 aa22.57■■□□□ 1.2
SIL1-213ENST00000509534 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
SIL1-213ENST00000509534 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
SIL1-213ENST00000509534 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
SIL1-213ENST00000509534 ABCA3Q99758 1704 aa22.56■■□□□ 1.2
SIL1-213ENST00000509534 HAP1P54257 671 aaPredicted RBP22.55■■□□□ 1.2
SIL1-213ENST00000509534 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms