RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	MORC1	Q86VD1	984 aa		13.63	□□□□□ -0.23
FBXO38-215	ENST00000509411	GGNBP2	Q9H3C7	697 aa		13.63	□□□□□ -0.23
FBXO38-215	ENST00000509411	TERF2IP	Q9NYB0	399 aa		13.63	□□□□□ -0.23
FBXO38-215	ENST00000509411	CCDC61	Q9Y6R9	512 aa		13.63	□□□□□ -0.23
FBXO38-215	ENST00000509411	MON2	Q7Z3U7	1717 aa		13.63	□□□□□ -0.23
FBXO38-215	ENST00000509411	ANKRD26	Q9UPS8	1709 aa		13.63	□□□□□ -0.23
FBXO38-215	ENST00000509411	KIF20B	Q96Q89	1820 aa		13.62	□□□□□ -0.23
FBXO38-215	ENST00000509411	NALCN	Q8IZF0	1738 aa		13.62	□□□□□ -0.23
FBXO38-215	ENST00000509411	TNNT2	P45379	298 aa	Predicted RBP	13.62	□□□□□ -0.23
FBXO38-215	ENST00000509411	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.62	□□□□□ -0.23
FBXO38-215	ENST00000509411	RGPD8	O14715	1765 aa	Predicted RBP	13.62	□□□□□ -0.23
FBXO38-215	ENST00000509411	NWD1	Q149M9	1564 aa		13.62	□□□□□ -0.23
FBXO38-215	ENST00000509411	NSD2	O96028	1365 aa		13.61	□□□□□ -0.23
FBXO38-215	ENST00000509411	ZRANB1	Q9UGI0	708 aa		13.61	□□□□□ -0.23
FBXO38-215	ENST00000509411	GTF3C3	Q9Y5Q9	886 aa		13.61	□□□□□ -0.23
FBXO38-215	ENST00000509411	BLM	P54132	1417 aa	Predicted RBP	13.6	□□□□□ -0.23
FBXO38-215	ENST00000509411	MED1	Q15648	1581 aa	Predicted RBP	13.6	□□□□□ -0.23
FBXO38-215	ENST00000509411	FMN2	Q9NZ56	1722 aa		13.6	□□□□□ -0.23
FBXO38-215	ENST00000509411	ZBED9	Q6R2W3	1325 aa		13.6	□□□□□ -0.23
FBXO38-215	ENST00000509411	SHPRH	Q149N8	1683 aa		13.59	□□□□□ -0.23
FBXO38-215	ENST00000509411	ITSN1	Q15811	1721 aa		13.59	□□□□□ -0.23
FBXO38-215	ENST00000509411	NRK	Q7Z2Y5	1582 aa		13.59	□□□□□ -0.23
FBXO38-215	ENST00000509411	PLEKHG3	A1L390	1219 aa		13.59	□□□□□ -0.23
FBXO38-215	ENST00000509411	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	7e-8	■■■■□ 20.7
FBXO38-215	ENST00000509411	ADAMTS8	Q9UP79	889 aa		13.59	□□□□□ -0.23
FBXO38-215	ENST00000509411	POLR3A	O14802	1390 aa	Predicted RBP	13.58	□□□□□ -0.23
FBXO38-215	ENST00000509411	NME9	Q86XW9	330 aa		13.58	□□□□□ -0.24
FBXO38-215	ENST00000509411	EDC4	Q6P2E9	1401 aa	Known RBP	13.57	□□□□□ -0.24
FBXO38-215	ENST00000509411	FBLN1	P23142	703 aa		13.57	□□□□□ -0.24
FBXO38-215	ENST00000509411	MTHFS	P49914	203 aa		13.57	□□□□□ -0.24
FBXO38-215	ENST00000509411	ACE	P12821	1306 aa		13.57	□□□□□ -0.24
FBXO38-215	ENST00000509411	INSR	P06213	1382 aa		13.57	□□□□□ -0.24
FBXO38-215	ENST00000509411	SSH2	Q76I76	1423 aa		13.56	□□□□□ -0.24
FBXO38-215	ENST00000509411	COL3A1	P02461	1466 aa	Predicted RBP	13.55	□□□□□ -0.24
FBXO38-215	ENST00000509411	SLC4A2	P04920	1241 aa		13.55	□□□□□ -0.24
FBXO38-215	ENST00000509411	PMFBP1	Q8TBY8	1022 aa		13.55	□□□□□ -0.24
FBXO38-215	ENST00000509411	ANKAR	Q7Z5J8	1434 aa		13.55	□□□□□ -0.24
FBXO38-215	ENST00000509411	ADGRL3	Q9HAR2	1447 aa		13.55	□□□□□ -0.24
FBXO38-215	ENST00000509411	TTC21B	Q7Z4L5	1316 aa		13.54	□□□□□ -0.24
FBXO38-215	ENST00000509411	USP6	P35125	1406 aa		13.54	□□□□□ -0.24
FBXO38-215	ENST00000509411	SALL2	Q9Y467	1007 aa	Predicted RBP	13.53	□□□□□ -0.24
FBXO38-215	ENST00000509411	PROSER2	Q86WR7	435 aa	Predicted RBP	13.52	□□□□□ -0.25
FBXO38-215	ENST00000509411	CCDC146	Q8IYE0	955 aa		13.52	□□□□□ -0.25
FBXO38-215	ENST00000509411	ZNF692	Q9BU19	519 aa	Predicted RBP	13.52	□□□□□ -0.25
FBXO38-215	ENST00000509411	TMEM94	Q12767	1356 aa		13.52	□□□□□ -0.25
FBXO38-215	ENST00000509411	WDR43	Q15061	677 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
FBXO38-215	ENST00000509411	POLK	Q9UBT6	870 aa		13.5	□□□□□ -0.25
FBXO38-215	ENST00000509411	OVOS2	A0A0J9YW53	1432 aa		13.49	□□□□□ -0.25
FBXO38-215	ENST00000509411	OVOS2	Q6IE36	1432 aa		13.49	□□□□□ -0.25
FBXO38-215	ENST00000509411	ROBO1	Q9Y6N7	1651 aa		13.49	□□□□□ -0.25
FBXO38-215	ENST00000509411	MAP2	P11137	1827 aa	Known RBP	13.48	□□□□□ -0.25
FBXO38-215	ENST00000509411	PNPLA6	Q8IY17	1366 aa		13.48	□□□□□ -0.25
FBXO38-215	ENST00000509411	MARF1	Q9Y4F3	1742 aa	Known RBP	13.48	□□□□□ -0.25
FBXO38-215	ENST00000509411	SMG6	Q86US8	1419 aa	Known RBP	13.47	□□□□□ -0.25
FBXO38-215	ENST00000509411	PIK3C2A	O00443	1686 aa		13.47	□□□□□ -0.25
FBXO38-215	ENST00000509411	NGDN	Q8NEJ9	315 aa	Known RBP	13.47	□□□□□ -0.25
FBXO38-215	ENST00000509411	CDCA7L	Q96GN5	454 aa		13.47	□□□□□ -0.25
FBXO38-215	ENST00000509411	PHF8	Q9UPP1	1060 aa		13.47	□□□□□ -0.25
FBXO38-215	ENST00000509411	EMILIN1	Q9Y6C2	1016 aa		13.47	□□□□□ -0.25
FBXO38-215	ENST00000509411	MSH6	P52701	1360 aa		13.46	□□□□□ -0.25
FBXO38-215	ENST00000509411	AATK	Q6ZMQ8	1374 aa		13.46	□□□□□ -0.25
FBXO38-215	ENST00000509411	APAF1	O14727	1248 aa		13.46	□□□□□ -0.25
FBXO38-215	ENST00000509411	COG3	Q96JB2	828 aa		13.46	□□□□□ -0.25
FBXO38-215	ENST00000509411	USP31	Q70CQ4	1352 aa		13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	ZNF521	Q96K83	1311 aa		13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	CAPN15	O75808	1086 aa		13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	RRS1	Q15050	365 aa	Known RBP	13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	CFAP53	Q96M91	514 aa		13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	ORAI2	Q96SN7	254 aa		13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	NUDC	Q9Y266	331 aa		13.45	□□□□□ -0.26
FBXO38-215	ENST00000509411	PEAK1	Q9H792	1746 aa		13.44	□□□□□ -0.26
FBXO38-215	ENST00000509411	C14orf37	Q86TY3	774 aa		13.44	□□□□□ -0.26
FBXO38-215	ENST00000509411	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.44	□□□□□ -0.26
FBXO38-215	ENST00000509411	NCOA3	Q9Y6Q9	1424 aa		13.44	□□□□□ -0.26
FBXO38-215	ENST00000509411	TTC21A	Q8NDW8	1320 aa		13.43	□□□□□ -0.26
FBXO38-215	ENST00000509411	PHLPP1	O60346	1717 aa		13.43	□□□□□ -0.26
FBXO38-215	ENST00000509411	ESCO1	Q5FWF5	840 aa		13.43	□□□□□ -0.26
FBXO38-215	ENST00000509411	C1orf167	Q5SNV9	1468 aa		13.42	□□□□□ -0.26
FBXO38-215	ENST00000509411	MST1R	Q04912	1400 aa		13.42	□□□□□ -0.26
FBXO38-215	ENST00000509411	USP54	Q70EL1	1684 aa		13.42	□□□□□ -0.26
FBXO38-215	ENST00000509411	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.42	□□□□□ -0.26
FBXO38-215	ENST00000509411	PPM1G	O15355	546 aa	Predicted RBP	13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	DIAPH1	O60610	1272 aa	Known RBP	13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	IL13	P35225	146 aa		13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	NUTM2G	Q5VZR2	741 aa		13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	PLEKHF1	Q96S99	279 aa		13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	C19orf44	Q9H6X5	657 aa		13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	SLAIN2	Q9P270	581 aa		13.41	□□□□□ -0.26
FBXO38-215	ENST00000509411	U2SURP	O15042	1029 aa	Known RBP	13.4	□□□□□ -0.26
FBXO38-215	ENST00000509411	RUNDC1	Q96C34	613 aa		13.4	□□□□□ -0.26
FBXO38-215	ENST00000509411	RRP7A	Q9Y3A4	280 aa	Known RBP	13.4	□□□□□ -0.26
FBXO38-215	ENST00000509411	SOX12	O15370	315 aa		13.39	□□□□□ -0.27
FBXO38-215	ENST00000509411	PDE3B	Q13370	1112 aa		13.39	□□□□□ -0.27
FBXO38-215	ENST00000509411	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.39	□□□□□ -0.27
FBXO38-215	ENST00000509411	XPC	Q01831	940 aa	Predicted RBP	13.38	□□□□□ -0.27
FBXO38-215	ENST00000509411	TCP11L2	Q8N4U5	519 aa		13.38	□□□□□ -0.27
FBXO38-215	ENST00000509411	RGS17	Q9UGC6	210 aa	Predicted RBP	13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms