RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.14
TPM3-219ENST00000509409 CENPJQ9HC77 1338 aaPredicted RBP22.14■■□□□ 1.14
TPM3-219ENST00000509409 ONECUT3O60422 494 aaPredicted RBP22.14■■□□□ 1.13
TPM3-219ENST00000509409 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
TPM3-219ENST00000509409 KRT27Q7Z3Y8 459 aa22.14■■□□□ 1.13
TPM3-219ENST00000509409 ZRANB1Q9UGI0 708 aa22.14■■□□□ 1.13
TPM3-219ENST00000509409 PLEKHG3A1L390 1219 aa22.13■■□□□ 1.13
TPM3-219ENST00000509409 FAM98CQ17RN3 349 aaKnown RBP22.13■■□□□ 1.13
TPM3-219ENST00000509409 ARHGEF28Q8N1W1 1705 aaKnown RBP22.13■■□□□ 1.13
TPM3-219ENST00000509409 ATP7BP35670 1465 aa22.13■■□□□ 1.13
TPM3-219ENST00000509409 TRPM3Q9HCF6 1732 aaPredicted RBP22.11■■□□□ 1.13
TPM3-219ENST00000509409 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
TPM3-219ENST00000509409 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
TPM3-219ENST00000509409 ABTB2Q8N961 1025 aa22.1■■□□□ 1.13
TPM3-219ENST00000509409 CHRNA2Q15822 529 aa22.09■■□□□ 1.13
TPM3-219ENST00000509409 POLR3AO14802 1390 aaPredicted RBP22.08■■□□□ 1.12
TPM3-219ENST00000509409 NWD2Q9ULI1 1742 aa22.08■■□□□ 1.12
TPM3-219ENST00000509409 KIAA1210Q9ULL0 1709 aa22.08■■□□□ 1.12
TPM3-219ENST00000509409 PLCH1Q4KWH8 1693 aa22.07■■□□□ 1.12
TPM3-219ENST00000509409 ALS2Q96Q42 1657 aa22.07■■□□□ 1.12
TPM3-219ENST00000509409 BLMP54132 1417 aaPredicted RBP22.07■■□□□ 1.12
TPM3-219ENST00000509409 STRN4Q9NRL3 753 aa22.07■■□□□ 1.12
TPM3-219ENST00000509409 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
TPM3-219ENST00000509409 ABCA3Q99758 1704 aa22.06■■□□□ 1.12
TPM3-219ENST00000509409 EVA1CP58658 441 aa22.06■■□□□ 1.12
TPM3-219ENST00000509409 DEFB132Q7Z7B7 95 aa22.06■■□□□ 1.12
TPM3-219ENST00000509409 EP400Q96L91 3159 aa22.06■■□□□ 1.12
TPM3-219ENST00000509409 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
TPM3-219ENST00000509409 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
TPM3-219ENST00000509409 ITSN1Q15811 1721 aa22.04■■□□□ 1.12
TPM3-219ENST00000509409 CABP1Q9NZU7 370 aa22.04■■□□□ 1.12
TPM3-219ENST00000509409 PPIP5K1Q6PFW1 1433 aa22.04■■□□□ 1.12
TPM3-219ENST00000509409 COL14A1Q05707 1796 aaKnown RBP22.03■■□□□ 1.12
TPM3-219ENST00000509409 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
TPM3-219ENST00000509409 EVC2Q86UK5 1308 aa22.02■■□□□ 1.12
TPM3-219ENST00000509409 ROCK2O75116 1388 aaKnown RBP22■■□□□ 1.11
TPM3-219ENST00000509409 FAM182BQ5T319 152 aa22■■□□□ 1.11
TPM3-219ENST00000509409 USP35Q9P2H5 1018 aa22■■□□□ 1.11
TPM3-219ENST00000509409 BRWD3Q6RI45 1802 aa21.99■■□□□ 1.11
TPM3-219ENST00000509409 ZBTB7CA1YPR0 619 aa21.99■■□□□ 1.11
TPM3-219ENST00000509409 SPATA31A1Q5TZJ5 1347 aa21.99■■□□□ 1.11
TPM3-219ENST00000509409 GCP02774 474 aa21.98■■□□□ 1.11
TPM3-219ENST00000509409 BAG6P46379 1132 aa21.98■■□□□ 1.11
TPM3-219ENST00000509409 NLRP6P59044 892 aa21.97■■□□□ 1.11
TPM3-219ENST00000509409 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
TPM3-219ENST00000509409 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
TPM3-219ENST00000509409 USP19O94966 1318 aa21.94■■□□□ 1.1
TPM3-219ENST00000509409 BRD4O60885 1362 aaPredicted RBP21.94■■□□□ 1.1
TPM3-219ENST00000509409 TOPAZ1Q8N9V7 1692 aa21.94■■□□□ 1.1
TPM3-219ENST00000509409 CRYBG1Q9Y4K1 1723 aa21.92■■□□□ 1.1
TPM3-219ENST00000509409 PDE3BQ13370 1112 aa21.92■■□□□ 1.1
TPM3-219ENST00000509409 ZNF692Q9BU19 519 aaPredicted RBP21.92■■□□□ 1.1
TPM3-219ENST00000509409 CPDO75976 1380 aa21.91■■□□□ 1.1
TPM3-219ENST00000509409 EN1Q05925 392 aaPredicted RBP21.91■■□□□ 1.1
TPM3-219ENST00000509409 FAM196AQ6ZSG2 479 aa21.9■■□□□ 1.1
TPM3-219ENST00000509409 BARGINQ6ZT62 677 aa21.9■■□□□ 1.1
TPM3-219ENST00000509409 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
TPM3-219ENST00000509409 CARD11Q9BXL7 1154 aa21.9■■□□□ 1.1
TPM3-219ENST00000509409 QRICH2Q9H0J4 1663 aa21.9■■□□□ 1.1
TPM3-219ENST00000509409 PHRF1Q9P1Y6 1649 aaKnown RBP21.9■■□□□ 1.1
TPM3-219ENST00000509409 USP6P35125 1406 aa21.89■■□□□ 1.1
TPM3-219ENST00000509409 SSH2Q76I76 1423 aa21.89■■□□□ 1.1
TPM3-219ENST00000509409 SRCAPQ6ZRS2 3230 aa21.88■■□□□ 1.09
TPM3-219ENST00000509409 TRIM37O94972 964 aa21.87■■□□□ 1.09
TPM3-219ENST00000509409 THRAP3Q9Y2W1 955 aaKnown RBP21.87■■□□□ 1.09
TPM3-219ENST00000509409 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
TPM3-219ENST00000509409 TTC21BQ7Z4L5 1316 aa21.86■■□□□ 1.09
TPM3-219ENST00000509409 CAMTA1Q9Y6Y1 1673 aa21.86■■□□□ 1.09
TPM3-219ENST00000509409 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
TPM3-219ENST00000509409 SOX12O15370 315 aa21.85■■□□□ 1.09
TPM3-219ENST00000509409 NRKQ7Z2Y5 1582 aa21.85■■□□□ 1.09
TPM3-219ENST00000509409 PSDA5PKW4 1024 aaPredicted RBP21.84■■□□□ 1.09
TPM3-219ENST00000509409 APBA3O96018 575 aa21.83■■□□□ 1.09
TPM3-219ENST00000509409 THSD7AQ9UPZ6 1657 aa21.82■■□□□ 1.08
TPM3-219ENST00000509409 EZH2Q15910 746 aaKnown RBP21.82■■□□□ 1.08
TPM3-219ENST00000509409 TOM1L2Q6ZVM7 507 aa21.82■■□□□ 1.08
TPM3-219ENST00000509409 KCNH5Q8NCM2 988 aa21.82■■□□□ 1.08
TPM3-219ENST00000509409 TMC1Q8TDI8 760 aa21.82■■□□□ 1.08
TPM3-219ENST00000509409 TTC21AQ8NDW8 1320 aa21.81■■□□□ 1.08
TPM3-219ENST00000509409 AATKQ6ZMQ8 1374 aa21.81■■□□□ 1.08
TPM3-219ENST00000509409 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
TPM3-219ENST00000509409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.08
TPM3-219ENST00000509409 COL5A2P05997 1499 aaPredicted RBP21.79■■□□□ 1.08
TPM3-219ENST00000509409 AXIN2Q9Y2T1 843 aa21.79■■□□□ 1.08
TPM3-219ENST00000509409 CSB-PGBD3P0DP91 1061 aa21.78■■□□□ 1.08
TPM3-219ENST00000509409 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
TPM3-219ENST00000509409 ARHGEF25Q86VW2 580 aa21.78■■□□□ 1.08
TPM3-219ENST00000509409 CRB1P82279 1406 aa21.78■■□□□ 1.08
TPM3-219ENST00000509409 R3HDM1Q15032 1099 aaKnown RBP21.77■■□□□ 1.08
TPM3-219ENST00000509409 HDGFL2Q7Z4V5 671 aaPredicted RBP21.77■■□□□ 1.08
TPM3-219ENST00000509409 CAMKK2Q96RR4 588 aa21.77■■□□□ 1.08
TPM3-219ENST00000509409 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
TPM3-219ENST00000509409 SLIT3O75094 1523 aa21.75■■□□□ 1.07
TPM3-219ENST00000509409 CPSF1Q10570 1443 aaKnown RBP21.75■■□□□ 1.07
TPM3-219ENST00000509409 DDB1Q16531 1140 aa21.75■■□□□ 1.07
TPM3-219ENST00000509409 RGPD1P0DJD0 1748 aa21.75■■□□□ 1.07
TPM3-219ENST00000509409 C11orf95C9JLR9 678 aaPredicted RBP21.74■■□□□ 1.07
TPM3-219ENST00000509409 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
TPM3-219ENST00000509409 WDR17Q8IZU2 1322 aa21.74■■□□□ 1.07
TPM3-219ENST00000509409 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 291.3 ms