RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
LYSMD3-204ENST00000509384 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
LYSMD3-204ENST00000509384 NRKQ7Z2Y5 1582 aa16.89■□□□□ 0.29
LYSMD3-204ENST00000509384 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
LYSMD3-204ENST00000509384 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
LYSMD3-204ENST00000509384 COG3Q96JB2 828 aa16.87■□□□□ 0.29
LYSMD3-204ENST00000509384 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
LYSMD3-204ENST00000509384 INSRP06213 1382 aa16.87■□□□□ 0.29
LYSMD3-204ENST00000509384 STRCP1A6NGW2 1772 aa16.87■□□□□ 0.29
LYSMD3-204ENST00000509384 MTHFSP49914 203 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 TTC21AQ8NDW8 1320 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 DCCP43146 1447 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 ESCO1Q5FWF5 840 aa16.86■□□□□ 0.29
LYSMD3-204ENST00000509384 ATF3P18847 181 aa16.85■□□□□ 0.29
LYSMD3-204ENST00000509384 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
LYSMD3-204ENST00000509384 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
LYSMD3-204ENST00000509384 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
LYSMD3-204ENST00000509384 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
LYSMD3-204ENST00000509384 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
LYSMD3-204ENST00000509384 MSH6P52701 1360 aa16.83■□□□□ 0.28
LYSMD3-204ENST00000509384 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
LYSMD3-204ENST00000509384 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
LYSMD3-204ENST00000509384 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
LYSMD3-204ENST00000509384 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
LYSMD3-204ENST00000509384 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
LYSMD3-204ENST00000509384 AATKQ6ZMQ8 1374 aa16.81■□□□□ 0.28
LYSMD3-204ENST00000509384 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
LYSMD3-204ENST00000509384 MST1RQ04912 1400 aa16.8■□□□□ 0.28
LYSMD3-204ENST00000509384 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
LYSMD3-204ENST00000509384 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
LYSMD3-204ENST00000509384 MSH5O43196 834 aa16.78■□□□□ 0.28
LYSMD3-204ENST00000509384 PSME1Q06323 249 aa16.78■□□□□ 0.28
LYSMD3-204ENST00000509384 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
LYSMD3-204ENST00000509384 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
LYSMD3-204ENST00000509384 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.28
LYSMD3-204ENST00000509384 COL3A1P02461 1466 aaPredicted RBP16.77■□□□□ 0.27
LYSMD3-204ENST00000509384 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
LYSMD3-204ENST00000509384 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
LYSMD3-204ENST00000509384 PNPLA6Q8IY17 1366 aa16.76■□□□□ 0.27
LYSMD3-204ENST00000509384 SHPRHQ149N8 1683 aa16.76■□□□□ 0.27
LYSMD3-204ENST00000509384 FBLN1P23142 703 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 FOXO3O43524 673 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 NLRP6P59044 892 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
LYSMD3-204ENST00000509384 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
LYSMD3-204ENST00000509384 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
LYSMD3-204ENST00000509384 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
LYSMD3-204ENST00000509384 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
LYSMD3-204ENST00000509384 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.272e-12■■■■■ 59
LYSMD3-204ENST00000509384 XIRP1Q702N8 1843 aaKnown RBP16.72■□□□□ 0.27
LYSMD3-204ENST00000509384 U2SURPO15042 1029 aaKnown RBP16.71■□□□□ 0.27
LYSMD3-204ENST00000509384 SOX12O15370 315 aa16.71■□□□□ 0.27
LYSMD3-204ENST00000509384 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
LYSMD3-204ENST00000509384 NUTM2GQ5VZR2 741 aa16.71■□□□□ 0.27
LYSMD3-204ENST00000509384 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
LYSMD3-204ENST00000509384 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
LYSMD3-204ENST00000509384 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
LYSMD3-204ENST00000509384 SOCS7O14512 581 aa16.7■□□□□ 0.26
LYSMD3-204ENST00000509384 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
LYSMD3-204ENST00000509384 RUNDC1Q96C34 613 aa16.68■□□□□ 0.26
LYSMD3-204ENST00000509384 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
LYSMD3-204ENST00000509384 APAF1O14727 1248 aa16.67■□□□□ 0.26
LYSMD3-204ENST00000509384 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
LYSMD3-204ENST00000509384 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
LYSMD3-204ENST00000509384 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
LYSMD3-204ENST00000509384 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
LYSMD3-204ENST00000509384 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
LYSMD3-204ENST00000509384 FLT4P35916 1363 aa16.66■□□□□ 0.26
LYSMD3-204ENST00000509384 IL13P35225 146 aa16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 MARF1Q9Y4F3 1742 aaKnown RBP16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 AMPHP49418 695 aa16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
LYSMD3-204ENST00000509384 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
LYSMD3-204ENST00000509384 KCNH5Q8NCM2 988 aa16.64■□□□□ 0.25
LYSMD3-204ENST00000509384 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
LYSMD3-204ENST00000509384 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
LYSMD3-204ENST00000509384 PEAK1Q9H792 1746 aa16.63■□□□□ 0.25
LYSMD3-204ENST00000509384 NFAT5O94916 1531 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 PXDNQ92626 1479 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 RTL1A6NKG5 1358 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 USP19O94966 1318 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 FCHSD2O94868 740 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 TCP11L2Q8N4U5 519 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms