RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 SH3BP2P78314 561 aa11.14□□□□□ -0.63
COL6A4P2-204ENST00000509090 TRIM67Q6ZTA4 783 aa11.14□□□□□ -0.63
COL6A4P2-204ENST00000509090 GDF9O60383 454 aa11.13□□□□□ -0.63
COL6A4P2-204ENST00000509090 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
COL6A4P2-204ENST00000509090 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
COL6A4P2-204ENST00000509090 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
COL6A4P2-204ENST00000509090 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
COL6A4P2-204ENST00000509090 WNT7AO00755 349 aa11.11□□□□□ -0.63
COL6A4P2-204ENST00000509090 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
COL6A4P2-204ENST00000509090 PRR20EP86478 221 aa11.1□□□□□ -0.63
COL6A4P2-204ENST00000509090 PRR20CP86479 221 aa11.1□□□□□ -0.63
COL6A4P2-204ENST00000509090 PRR20DP86480 221 aa11.1□□□□□ -0.63
COL6A4P2-204ENST00000509090 PRR20BP86481 221 aa11.1□□□□□ -0.63
COL6A4P2-204ENST00000509090 PRR20AP86496 221 aa11.1□□□□□ -0.63
COL6A4P2-204ENST00000509090 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
COL6A4P2-204ENST00000509090 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-204ENST00000509090 FOXC1Q12948 553 aa11.09□□□□□ -0.63
COL6A4P2-204ENST00000509090 NBPF14Q5TI25 921 aa11.09□□□□□ -0.63
COL6A4P2-204ENST00000509090 MCM6Q14566 821 aa11.08□□□□□ -0.64
COL6A4P2-204ENST00000509090 PDXDC2PQ6P474 469 aa11.08□□□□□ -0.64
COL6A4P2-204ENST00000509090 FOXJ1Q92949 421 aa11.08□□□□□ -0.64
COL6A4P2-204ENST00000509090 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
COL6A4P2-204ENST00000509090 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
COL6A4P2-204ENST00000509090 APBB1O00213 710 aa11.06□□□□□ -0.64
COL6A4P2-204ENST00000509090 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
COL6A4P2-204ENST00000509090 MRGPRX2Q96LB1 330 aa11.06□□□□□ -0.64
COL6A4P2-204ENST00000509090 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
COL6A4P2-204ENST00000509090 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
COL6A4P2-204ENST00000509090 SIAH2O43255 324 aa11.05□□□□□ -0.64
COL6A4P2-204ENST00000509090 GPR37L1O60883 481 aa11.05□□□□□ -0.64
COL6A4P2-204ENST00000509090 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
COL6A4P2-204ENST00000509090 VARSP26640 1264 aaKnown RBP11.04□□□□□ -0.64
COL6A4P2-204ENST00000509090 FLIIQ13045 1269 aa11.04□□□□□ -0.64
COL6A4P2-204ENST00000509090 BPHLQ86WA6 291 aaPredicted RBP11.04□□□□□ -0.64
COL6A4P2-204ENST00000509090 EHBP1Q8NDI1 1231 aa11.04□□□□□ -0.64
COL6A4P2-204ENST00000509090 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
COL6A4P2-204ENST00000509090 NDUFB9Q9Y6M9 179 aa11.04□□□□□ -0.64
COL6A4P2-204ENST00000509090 GFRA3O60609 400 aa11.03□□□□□ -0.64
COL6A4P2-204ENST00000509090 TOR4AQ9NXH8 423 aa11.03□□□□□ -0.64
COL6A4P2-204ENST00000509090 GPSM3Q9Y4H4 160 aa11.03□□□□□ -0.64
COL6A4P2-204ENST00000509090 OCSTAMPQ9BR26 566 aa11.02□□□□□ -0.65
COL6A4P2-204ENST00000509090 AGERQ15109 404 aa11.01□□□□□ -0.65
COL6A4P2-204ENST00000509090 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
COL6A4P2-204ENST00000509090 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
COL6A4P2-204ENST00000509090 NRG2O14511 850 aaPredicted RBP11□□□□□ -0.65
COL6A4P2-204ENST00000509090 PTK2Q05397 1052 aa11□□□□□ -0.65
COL6A4P2-204ENST00000509090 LAPTM4AQ15012 233 aa11□□□□□ -0.65
COL6A4P2-204ENST00000509090 CYP4X1Q8N118 509 aa11□□□□□ -0.65
COL6A4P2-204ENST00000509090 MPNDQ8N594 471 aa11□□□□□ -0.65
COL6A4P2-204ENST00000509090 SNIP1Q8TAD8 396 aaKnown RBP11□□□□□ -0.65
COL6A4P2-204ENST00000509090 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
COL6A4P2-204ENST00000509090 ARHGAP9Q9BRR9 750 aa10.99□□□□□ -0.65
COL6A4P2-204ENST00000509090 PRM3Q9NNZ6 103 aa10.99□□□□□ -0.65
COL6A4P2-204ENST00000509090 MAGEB6P1A0A0J9YX57 407 aa10.97□□□□□ -0.65
COL6A4P2-204ENST00000509090 ERFEQ4G0M1 354 aa10.97□□□□□ -0.65
COL6A4P2-204ENST00000509090 TRMT44Q8IYL2 757 aaKnown RBP10.97□□□□□ -0.65
COL6A4P2-204ENST00000509090 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
COL6A4P2-204ENST00000509090 TTC24A2A3L6 582 aaPredicted RBP10.96□□□□□ -0.65
COL6A4P2-204ENST00000509090 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
COL6A4P2-204ENST00000509090 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
COL6A4P2-204ENST00000509090 COG6Q9Y2V7 657 aa10.96□□□□□ -0.65
COL6A4P2-204ENST00000509090 ZBBXA8MT70 800 aa10.95□□□□□ -0.66
COL6A4P2-204ENST00000509090 FBXO45P0C2W1 286 aa10.95□□□□□ -0.66
COL6A4P2-204ENST00000509090 IRF5Q13568 498 aa10.95□□□□□ -0.66
COL6A4P2-204ENST00000509090 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
COL6A4P2-204ENST00000509090 CARD14Q9BXL6 1004 aa10.95□□□□□ -0.66
COL6A4P2-204ENST00000509090 J3QL48 77 aa10.94□□□□□ -0.66
COL6A4P2-204ENST00000509090 SMPD1P17405 629 aa10.94□□□□□ -0.66
COL6A4P2-204ENST00000509090 GTF3C3Q9Y5Q9 886 aa10.94□□□□□ -0.66
COL6A4P2-204ENST00000509090 TLL2Q9Y6L7 1015 aa10.94□□□□□ -0.66
COL6A4P2-204ENST00000509090 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
COL6A4P2-204ENST00000509090 NR1H3Q13133 447 aa10.93□□□□□ -0.66
COL6A4P2-204ENST00000509090 POM121Q96HA1 1249 aa10.93□□□□□ -0.66
COL6A4P2-204ENST00000509090 UBTFP17480 764 aaKnown RBP10.92□□□□□ -0.66
COL6A4P2-204ENST00000509090 DGAT1O75907 488 aa10.91□□□□□ -0.66
COL6A4P2-204ENST00000509090 ABL2P42684 1182 aa10.91□□□□□ -0.66
COL6A4P2-204ENST00000509090 MAP4K5Q9Y4K4 846 aa10.91□□□□□ -0.66
COL6A4P2-204ENST00000509090 GRM5P41594 1212 aa10.9□□□□□ -0.66
COL6A4P2-204ENST00000509090 FAM187AA6NFU0 413 aa10.89□□□□□ -0.67
COL6A4P2-204ENST00000509090 ARID5BQ14865 1188 aa10.89□□□□□ -0.67
COL6A4P2-204ENST00000509090 RAD21O60216 631 aa10.88□□□□□ -0.67
COL6A4P2-204ENST00000509090 ADH1CP00326 375 aa10.88□□□□□ -0.67
COL6A4P2-204ENST00000509090 AVPP01185 164 aa10.88□□□□□ -0.67
COL6A4P2-204ENST00000509090 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
COL6A4P2-204ENST00000509090 CDV3Q9UKY7 258 aaKnown RBP10.88□□□□□ -0.67
COL6A4P2-204ENST00000509090 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
COL6A4P2-204ENST00000509090 VASH1Q7L8A9 365 aaPredicted RBP10.87□□□□□ -0.67
COL6A4P2-204ENST00000509090 WASF2Q9Y6W5 498 aa10.87□□□□□ -0.67
COL6A4P2-204ENST00000509090 NR5A1Q13285 461 aa10.86□□□□□ -0.67
COL6A4P2-204ENST00000509090 WASHC4Q2M389 1173 aa10.86□□□□□ -0.67
COL6A4P2-204ENST00000509090 DZIP3Q86Y13 1208 aaKnown RBP10.86□□□□□ -0.67
COL6A4P2-204ENST00000509090 HPS1Q92902 700 aa10.86□□□□□ -0.67
COL6A4P2-204ENST00000509090 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
COL6A4P2-204ENST00000509090 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P2-204ENST00000509090 MCCD1P59942 119 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P2-204ENST00000509090 VAC14Q08AM6 782 aa10.84□□□□□ -0.67
COL6A4P2-204ENST00000509090 Q6ZNB5 142 aa10.84□□□□□ -0.67
COL6A4P2-204ENST00000509090 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P2-204ENST00000509090 PCDHB9Q9Y5E1 797 aa10.84□□□□□ -0.67
COL6A4P2-204ENST00000509090 A6NJR5 290 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms