RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 FOXO3O43524 673 aa20.14■□□□□ 0.81
SNCAIP-211ENST00000509023 MYBBP1AQ9BQG0 1328 aaKnown RBP20.13■□□□□ 0.81
SNCAIP-211ENST00000509023 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
SNCAIP-211ENST00000509023 PSME1Q06323 249 aa20.13■□□□□ 0.81
SNCAIP-211ENST00000509023 NME9Q86XW9 330 aa20.13■□□□□ 0.81
SNCAIP-211ENST00000509023 CCER2I3L3R5 266 aa20.12■□□□□ 0.81
SNCAIP-211ENST00000509023 MORC1Q86VD1 984 aa20.12■□□□□ 0.81
SNCAIP-211ENST00000509023 BRINP3Q76B58 766 aa20.12■□□□□ 0.81
SNCAIP-211ENST00000509023 TTC21AQ8NDW8 1320 aa20.11■□□□□ 0.81
SNCAIP-211ENST00000509023 BRD4O60885 1362 aaPredicted RBP20.1■□□□□ 0.81
SNCAIP-211ENST00000509023 XPCQ01831 940 aaPredicted RBP20.1■□□□□ 0.81
SNCAIP-211ENST00000509023 PAK3O75914 559 aaPredicted RBP20.09■□□□□ 0.81
SNCAIP-211ENST00000509023 ZRANB1Q9UGI0 708 aa20.09■□□□□ 0.81
SNCAIP-211ENST00000509023 PIK3C2AO00443 1686 aa20.08■□□□□ 0.8
SNCAIP-211ENST00000509023 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.8
SNCAIP-211ENST00000509023 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.8
SNCAIP-211ENST00000509023 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.8
SNCAIP-211ENST00000509023 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.8
SNCAIP-211ENST00000509023 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
SNCAIP-211ENST00000509023 TRPM3Q9HCF6 1732 aaPredicted RBP20.06■□□□□ 0.8
SNCAIP-211ENST00000509023 NLRP13Q86W25 1043 aa20.06■□□□□ 0.8
SNCAIP-211ENST00000509023 COG3Q96JB2 828 aa20.06■□□□□ 0.8
SNCAIP-211ENST00000509023 CCDC184Q52MB2 194 aa20.06■□□□□ 0.8
SNCAIP-211ENST00000509023 OVOS2A0A0J9YW53 1432 aa20.05■□□□□ 0.8
SNCAIP-211ENST00000509023 OVOS2Q6IE36 1432 aa20.05■□□□□ 0.8
SNCAIP-211ENST00000509023 ABTB2Q8N961 1025 aa20.04■□□□□ 0.8
SNCAIP-211ENST00000509023 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
SNCAIP-211ENST00000509023 PXDNQ92626 1479 aa20.04■□□□□ 0.8
SNCAIP-211ENST00000509023 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
SNCAIP-211ENST00000509023 USP31Q70CQ4 1352 aa20.03■□□□□ 0.8
SNCAIP-211ENST00000509023 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
SNCAIP-211ENST00000509023 NLRP6P59044 892 aa20.02■□□□□ 0.8
SNCAIP-211ENST00000509023 NUTM2GQ5VZR2 741 aa20.02■□□□□ 0.8
SNCAIP-211ENST00000509023 NHSL1Q5SYE7 1610 aa20.01■□□□□ 0.79
SNCAIP-211ENST00000509023 TOM1O60784 492 aa20.01■□□□□ 0.79
SNCAIP-211ENST00000509023 USP54Q70EL1 1684 aa20.01■□□□□ 0.79
SNCAIP-211ENST00000509023 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
SNCAIP-211ENST00000509023 CERKQ8TCT0 537 aa20.01■□□□□ 0.79
SNCAIP-211ENST00000509023 SBNO1A3KN83 1393 aa20.01■□□□□ 0.79
SNCAIP-211ENST00000509023 MARF1Q9Y4F3 1742 aaKnown RBP20■□□□□ 0.79
SNCAIP-211ENST00000509023 ALS2Q96Q42 1657 aa20■□□□□ 0.79
SNCAIP-211ENST00000509023 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
SNCAIP-211ENST00000509023 SOS2Q07890 1332 aaPredicted RBP19.98■□□□□ 0.79
SNCAIP-211ENST00000509023 FBLN1P23142 703 aa19.98■□□□□ 0.79
SNCAIP-211ENST00000509023 TNS3Q68CZ2 1445 aa19.98■□□□□ 0.79
SNCAIP-211ENST00000509023 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
SNCAIP-211ENST00000509023 AATKQ6ZMQ8 1374 aa19.97■□□□□ 0.79
SNCAIP-211ENST00000509023 MTHFSP49914 203 aa19.97■□□□□ 0.79
SNCAIP-211ENST00000509023 SOX12O15370 315 aa19.95■□□□□ 0.78
SNCAIP-211ENST00000509023 PIP4K2BP78356 416 aa19.95■□□□□ 0.78
SNCAIP-211ENST00000509023 SPATA31A3Q5VYP0 1347 aa19.95■□□□□ 0.78
SNCAIP-211ENST00000509023 MAP2P11137 1827 aaKnown RBP19.95■□□□□ 0.78
SNCAIP-211ENST00000509023 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
SNCAIP-211ENST00000509023 POLKQ9UBT6 870 aa19.94■□□□□ 0.78
SNCAIP-211ENST00000509023 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
SNCAIP-211ENST00000509023 ARHGEF10O15013 1369 aa19.93■□□□□ 0.78
SNCAIP-211ENST00000509023 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
SNCAIP-211ENST00000509023 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
SNCAIP-211ENST00000509023 SLIT3O75094 1523 aa19.92■□□□□ 0.78
SNCAIP-211ENST00000509023 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
SNCAIP-211ENST00000509023 USP19O94966 1318 aa19.91■□□□□ 0.78
SNCAIP-211ENST00000509023 PPM1GO15355 546 aaPredicted RBP19.91■□□□□ 0.78
SNCAIP-211ENST00000509023 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
SNCAIP-211ENST00000509023 PNISRQ8TF01 805 aaKnown RBP19.91■□□□□ 0.78
SNCAIP-211ENST00000509023 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
SNCAIP-211ENST00000509023 MED1Q15648 1581 aaPredicted RBP19.9■□□□□ 0.78
SNCAIP-211ENST00000509023 KCNH5Q8NCM2 988 aa19.9■□□□□ 0.78
SNCAIP-211ENST00000509023 NFAT5O94916 1531 aa19.89■□□□□ 0.78
SNCAIP-211ENST00000509023 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
SNCAIP-211ENST00000509023 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
SNCAIP-211ENST00000509023 MAP3K19Q56UN5 1328 aa19.88■□□□□ 0.77
SNCAIP-211ENST00000509023 GCP02774 474 aa19.88■□□□□ 0.77
SNCAIP-211ENST00000509023 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
SNCAIP-211ENST00000509023 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
SNCAIP-211ENST00000509023 PHRF1Q9P1Y6 1649 aaKnown RBP19.87■□□□□ 0.77
SNCAIP-211ENST00000509023 PEAK1Q9H792 1746 aa19.87■□□□□ 0.77
SNCAIP-211ENST00000509023 CRYBG1Q9Y4K1 1723 aa19.87■□□□□ 0.77
SNCAIP-211ENST00000509023 LRRC59Q96AG4 307 aaKnown RBP19.86■□□□□ 0.77
SNCAIP-211ENST00000509023 COL16A1Q07092 1604 aaPredicted RBP19.86■□□□□ 0.77
SNCAIP-211ENST00000509023 SHPRHQ149N8 1683 aa19.85■□□□□ 0.77
SNCAIP-211ENST00000509023 LTN1O94822 1766 aa19.85■□□□□ 0.77
SNCAIP-211ENST00000509023 CABLES1Q8TDN4 633 aa19.85■□□□□ 0.77
SNCAIP-211ENST00000509023 INSRP06213 1382 aa19.85■□□□□ 0.77
SNCAIP-211ENST00000509023 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
SNCAIP-211ENST00000509023 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
SNCAIP-211ENST00000509023 FLT4P35916 1363 aa19.83■□□□□ 0.77
SNCAIP-211ENST00000509023 AMPHP49418 695 aa19.83■□□□□ 0.77
SNCAIP-211ENST00000509023 DIAPH1O60610 1272 aaKnown RBP19.82■□□□□ 0.76
SNCAIP-211ENST00000509023 KIF24Q5T7B8 1368 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 ABCA3Q99758 1704 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 ARHGEF25Q86VW2 580 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 ADAMTS8Q9UP79 889 aa19.81■□□□□ 0.76
SNCAIP-211ENST00000509023 HOXC9P31274 260 aa19.8■□□□□ 0.76
SNCAIP-211ENST00000509023 ZC3H6P61129 1189 aaKnown RBP19.8■□□□□ 0.76
SNCAIP-211ENST00000509023 NUDCQ9Y266 331 aa19.79■□□□□ 0.76
SNCAIP-211ENST00000509023 COL22A1Q8NFW1 1626 aaPredicted RBP19.79■□□□□ 0.76
SNCAIP-211ENST00000509023 IL13P35225 146 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms