RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 CCDC61Q9Y6R9 512 aa31.72■■■□□ 2.67
PACRGL-220ENST00000508952 ACEP12821 1306 aa31.7■■■□□ 2.66
PACRGL-220ENST00000508952 POLR3AO14802 1390 aaPredicted RBP31.69■■■□□ 2.66
PACRGL-220ENST00000508952 FAM83GA6ND36 823 aa31.69■■■□□ 2.66
PACRGL-220ENST00000508952 SRPK2P78362 688 aaKnown RBP31.69■■■□□ 2.66
PACRGL-220ENST00000508952 ATAD2Q6PL18 1390 aa31.68■■■□□ 2.66
PACRGL-220ENST00000508952 CABP2Q9NPB3 220 aa31.68■■■□□ 2.66
PACRGL-220ENST00000508952 ROCK2O75116 1388 aaKnown RBP31.68■■■□□ 2.66
PACRGL-220ENST00000508952 PLEKHG3A1L390 1219 aa31.66■■■□□ 2.66
PACRGL-220ENST00000508952 NBPF8Q3BBV2 869 aa31.66■■■□□ 2.66
PACRGL-220ENST00000508952 NRAPQ86VF7 1730 aa31.66■■■□□ 2.66
PACRGL-220ENST00000508952 COL14A1Q05707 1796 aaKnown RBP31.66■■■□□ 2.66
PACRGL-220ENST00000508952 TRIM26Q12899 539 aaPredicted RBP31.65■■■□□ 2.66
PACRGL-220ENST00000508952 PPIP5K1Q6PFW1 1433 aa31.65■■■□□ 2.66
PACRGL-220ENST00000508952 EP400Q96L91 3159 aa31.64■■■□□ 2.66
PACRGL-220ENST00000508952 VPS72Q15906 364 aa31.64■■■□□ 2.66
PACRGL-220ENST00000508952 PHRF1Q9P1Y6 1649 aaKnown RBP31.64■■■□□ 2.65
PACRGL-220ENST00000508952 NUTM2GQ5VZR2 741 aa31.62■■■□□ 2.65
PACRGL-220ENST00000508952 CCDC9Q9Y3X0 531 aaKnown RBP31.62■■■□□ 2.65
PACRGL-220ENST00000508952 BTG4Q9NY30 223 aa31.6■■■□□ 2.65
PACRGL-220ENST00000508952 BRWD3Q6RI45 1802 aa31.6■■■□□ 2.65
PACRGL-220ENST00000508952 PRDM11Q9NQV5 511 aa31.56■■■□□ 2.64
PACRGL-220ENST00000508952 TONSLQ96HA7 1378 aa31.56■■■□□ 2.64
PACRGL-220ENST00000508952 KIAA0232Q92628 1395 aa31.55■■■□□ 2.64
PACRGL-220ENST00000508952 EVC2Q86UK5 1308 aa31.54■■■□□ 2.64
PACRGL-220ENST00000508952 SEPT12Q8IYM1 358 aa31.54■■■□□ 2.64
PACRGL-220ENST00000508952 CABP1Q9NZU7 370 aa31.54■■■□□ 2.64
PACRGL-220ENST00000508952 ABTB2Q8N961 1025 aa31.53■■■□□ 2.64
PACRGL-220ENST00000508952 NRKQ7Z2Y5 1582 aa31.51■■■□□ 2.64
PACRGL-220ENST00000508952 ZC3H6P61129 1189 aaKnown RBP31.51■■■□□ 2.63
PACRGL-220ENST00000508952 CHRNA2Q15822 529 aa31.5■■■□□ 2.63
PACRGL-220ENST00000508952 ONECUT3O60422 494 aaPredicted RBP31.48■■■□□ 2.63
PACRGL-220ENST00000508952 USP6P35125 1406 aa31.48■■■□□ 2.63
PACRGL-220ENST00000508952 CARD11Q9BXL7 1154 aa31.47■■■□□ 2.63
PACRGL-220ENST00000508952 FAM98CQ17RN3 349 aaKnown RBP31.46■■■□□ 2.63
PACRGL-220ENST00000508952 USP19O94966 1318 aa31.46■■■□□ 2.63
PACRGL-220ENST00000508952 A0A0G2JS52 829 aa31.45■■■□□ 2.63
PACRGL-220ENST00000508952 MYT1Q01538 1121 aa31.45■■■□□ 2.63
PACRGL-220ENST00000508952 BRD4O60885 1362 aaPredicted RBP31.44■■■□□ 2.62
PACRGL-220ENST00000508952 SPATA31A5Q5VU36 1347 aa31.44■■■□□ 2.62
PACRGL-220ENST00000508952 SPATA31A7Q8IWB4 1347 aa31.44■■■□□ 2.62
PACRGL-220ENST00000508952 NLRP13Q86W25 1043 aa31.42■■■□□ 2.62
PACRGL-220ENST00000508952 AKAP12Q02952 1782 aa31.41■■■□□ 2.62
PACRGL-220ENST00000508952 KRT27Q7Z3Y8 459 aa31.41■■■□□ 2.62
PACRGL-220ENST00000508952 STRN4Q9NRL3 753 aa31.41■■■□□ 2.62
PACRGL-220ENST00000508952 PIK3C2AO00443 1686 aa31.4■■■□□ 2.62
PACRGL-220ENST00000508952 SSH2Q76I76 1423 aa31.4■■■□□ 2.62
PACRGL-220ENST00000508952 CCDC125Q86Z20 511 aa31.39■■■□□ 2.62
PACRGL-220ENST00000508952 SBNO2Q9Y2G9 1366 aa31.39■■■□□ 2.62
PACRGL-220ENST00000508952 LMO7Q8WWI1 1683 aa31.38■■■□□ 2.61
PACRGL-220ENST00000508952 GCP02774 474 aa31.37■■■□□ 2.61
PACRGL-220ENST00000508952 NLRP6P59044 892 aa31.37■■■□□ 2.61
PACRGL-220ENST00000508952 CPDO75976 1380 aa31.37■■■□□ 2.61
PACRGL-220ENST00000508952 THSD7AQ9UPZ6 1657 aa31.37■■■□□ 2.61
PACRGL-220ENST00000508952 CAMTA1Q9Y6Y1 1673 aa31.37■■■□□ 2.61
PACRGL-220ENST00000508952 BLMP54132 1417 aaPredicted RBP31.36■■■□□ 2.61
PACRGL-220ENST00000508952 SPATA31A1Q5TZJ5 1347 aa31.35■■■□□ 2.61
PACRGL-220ENST00000508952 SLIT3O75094 1523 aa31.34■■■□□ 2.61
PACRGL-220ENST00000508952 CPSF1Q10570 1443 aaKnown RBP31.32■■■□□ 2.6
PACRGL-220ENST00000508952 TTC21BQ7Z4L5 1316 aa31.31■■■□□ 2.6
PACRGL-220ENST00000508952 EVA1CP58658 441 aa31.31■■■□□ 2.6
PACRGL-220ENST00000508952 ZNF692Q9BU19 519 aaPredicted RBP31.31■■■□□ 2.6
PACRGL-220ENST00000508952 ZBTB7CA1YPR0 619 aa31.3■■■□□ 2.6
PACRGL-220ENST00000508952 USP35Q9P2H5 1018 aa31.3■■■□□ 2.6
PACRGL-220ENST00000508952 MON2Q7Z3U7 1717 aa31.29■■■□□ 2.6
PACRGL-220ENST00000508952 KTN1Q86UP2 1357 aaKnown RBP31.29■■■□□ 2.6
PACRGL-220ENST00000508952 FAM182BQ5T319 152 aa31.28■■■□□ 2.6
PACRGL-220ENST00000508952 LARP1Q6PKG0 1096 aaKnown RBP31.28■■■□□ 2.6
PACRGL-220ENST00000508952 COL5A2P05997 1499 aaPredicted RBP31.26■■■□□ 2.59
PACRGL-220ENST00000508952 SF3B2Q13435 895 aaKnown RBP31.25■■■□□ 2.59
PACRGL-220ENST00000508952 DEFB132Q7Z7B7 95 aa31.25■■■□□ 2.59
PACRGL-220ENST00000508952 TTC21AQ8NDW8 1320 aa31.24■■■□□ 2.59
PACRGL-220ENST00000508952 CD163L1Q9NR16 1453 aa31.23■■■□□ 2.59
PACRGL-220ENST00000508952 TMC1Q8TDI8 760 aa31.22■■■□□ 2.59
PACRGL-220ENST00000508952 COL18A1P39060 1754 aa31.22■■■□□ 2.59
PACRGL-220ENST00000508952 AATKQ6ZMQ8 1374 aa31.21■■■□□ 2.59
PACRGL-220ENST00000508952 ST20-MTHFSA0A0A6YYL1 179 aa31.2■■■□□ 2.59
PACRGL-220ENST00000508952 SOX12O15370 315 aa31.2■■■□□ 2.59
PACRGL-220ENST00000508952 BARGINQ6ZT62 677 aa31.19■■■□□ 2.58
PACRGL-220ENST00000508952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.19■■■□□ 2.58
PACRGL-220ENST00000508952 ZRANB1Q9UGI0 708 aa31.19■■■□□ 2.58
PACRGL-220ENST00000508952 RGPD1P0DJD0 1748 aa31.18■■■□□ 2.58
PACRGL-220ENST00000508952 TCP11L2Q8N4U5 519 aa31.18■■■□□ 2.58
PACRGL-220ENST00000508952 TESK2Q96S53 571 aa31.18■■■□□ 2.58
PACRGL-220ENST00000508952 SLC12A5Q9H2X9 1139 aa31.18■■■□□ 2.58
PACRGL-220ENST00000508952 RGPD5Q99666 1765 aa31.17■■■□□ 2.58
PACRGL-220ENST00000508952 NFAT5O94916 1531 aa31.16■■■□□ 2.58
PACRGL-220ENST00000508952 CRB1P82279 1406 aa31.15■■■□□ 2.58
PACRGL-220ENST00000508952 KCNH5Q8NCM2 988 aa31.15■■■□□ 2.58
PACRGL-220ENST00000508952 PCGF6Q9BYE7 350 aa31.15■■■□□ 2.58
PACRGL-220ENST00000508952 HDGFL2Q7Z4V5 671 aaPredicted RBP31.14■■■□□ 2.58
PACRGL-220ENST00000508952 ARHGEF25Q86VW2 580 aa31.14■■■□□ 2.58
PACRGL-220ENST00000508952 AXIN2Q9Y2T1 843 aa31.14■■■□□ 2.58
PACRGL-220ENST00000508952 USP54Q70EL1 1684 aa31.13■■■□□ 2.57
PACRGL-220ENST00000508952 TNS1Q9HBL0 1735 aaKnown RBP31.13■■■□□ 2.57
PACRGL-220ENST00000508952 NME9Q86XW9 330 aa31.13■■■□□ 2.57
PACRGL-220ENST00000508952 THRAP3Q9Y2W1 955 aaKnown RBP31.12■■■□□ 2.57
PACRGL-220ENST00000508952 A0A1W2PP64 1363 aa31.12■■■□□ 2.57
PACRGL-220ENST00000508952 BAG6P46379 1132 aa31.11■■■□□ 2.57
PACRGL-220ENST00000508952 PUS7Q96PZ0 661 aaKnown RBP31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms