RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 CDK12Q9NYV4 1490 aaPredicted RBP34.54■■■■□ 3.12
PROM1-209ENST00000508940 CABP1Q9NZU7 370 aa34.53■■■■□ 3.12
PROM1-209ENST00000508940 CLSPNQ9HAW4 1339 aa34.53■■■■□ 3.12
PROM1-209ENST00000508940 BCL9LQ86UU0 1499 aa34.51■■■■□ 3.11
PROM1-209ENST00000508940 UNC5CLQ8IV45 518 aa34.5■■■■□ 3.11
PROM1-209ENST00000508940 ATRNO75882 1429 aa34.49■■■■□ 3.11
PROM1-209ENST00000508940 ABCA3Q99758 1704 aa34.48■■■■□ 3.11
PROM1-209ENST00000508940 SLIT2O94813 1529 aa34.46■■■■□ 3.11
PROM1-209ENST00000508940 NUTM2GQ5VZR2 741 aa34.46■■■■□ 3.11
PROM1-209ENST00000508940 ABTB2Q8N961 1025 aa34.46■■■■□ 3.11
PROM1-209ENST00000508940 FAM83GA6ND36 823 aa34.45■■■■□ 3.11
PROM1-209ENST00000508940 TIMELESSQ9UNS1 1208 aa34.45■■■■□ 3.11
PROM1-209ENST00000508940 SBNO2Q9Y2G9 1366 aa34.45■■■■□ 3.11
PROM1-209ENST00000508940 GJD4Q96KN9 370 aaPredicted RBP34.43■■■■□ 3.1
PROM1-209ENST00000508940 ATAD2Q6PL18 1390 aa34.43■■■■□ 3.1
PROM1-209ENST00000508940 BRD4O60885 1362 aaPredicted RBP34.42■■■■□ 3.1
PROM1-209ENST00000508940 RGS12O14924 1447 aa34.41■■■■□ 3.1
PROM1-209ENST00000508940 CCER1Q8TC90 406 aaPredicted RBP34.41■■■■□ 3.1
PROM1-209ENST00000508940 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.4■■■■□ 3.1
PROM1-209ENST00000508940 NLRP13Q86W25 1043 aa34.38■■■■□ 3.09
PROM1-209ENST00000508940 ZNF692Q9BU19 519 aaPredicted RBP34.38■■■■□ 3.09
PROM1-209ENST00000508940 PRDM11Q9NQV5 511 aa34.38■■■■□ 3.09
PROM1-209ENST00000508940 CCDC9Q9Y3X0 531 aaKnown RBP34.38■■■■□ 3.09
PROM1-209ENST00000508940 USP6P35125 1406 aa34.37■■■■□ 3.09
PROM1-209ENST00000508940 PLCH1Q4KWH8 1693 aa34.36■■■■□ 3.09
PROM1-209ENST00000508940 NWD2Q9ULI1 1742 aa34.35■■■■□ 3.09
PROM1-209ENST00000508940 VPS72Q15906 364 aa34.35■■■■□ 3.09
PROM1-209ENST00000508940 BTG4Q9NY30 223 aa34.35■■■■□ 3.09
PROM1-209ENST00000508940 ST20-MTHFSA0A0A6YYL1 179 aa34.34■■■■□ 3.09
PROM1-209ENST00000508940 SLC24A1O60721 1099 aa34.34■■■■□ 3.09
PROM1-209ENST00000508940 CRYBG1Q9Y4K1 1723 aa34.34■■■■□ 3.09
PROM1-209ENST00000508940 COL14A1Q05707 1796 aaKnown RBP34.32■■■■□ 3.08
PROM1-209ENST00000508940 ZC3H6P61129 1189 aaKnown RBP34.32■■■■□ 3.08
PROM1-209ENST00000508940 NLRP6P59044 892 aa34.3■■■■□ 3.08
PROM1-209ENST00000508940 TMC1Q8TDI8 760 aa34.3■■■■□ 3.08
PROM1-209ENST00000508940 KIAA0232Q92628 1395 aa34.3■■■■□ 3.08
PROM1-209ENST00000508940 UPF1Q92900 1129 aaKnown RBP eCLIP34.29■■■■□ 3.08
PROM1-209ENST00000508940 PHRF1Q9P1Y6 1649 aaKnown RBP34.29■■■■□ 3.08
PROM1-209ENST00000508940 CHRNA2Q15822 529 aa34.27■■■■□ 3.08
PROM1-209ENST00000508940 PUS7Q96PZ0 661 aaKnown RBP34.27■■■■□ 3.08
PROM1-209ENST00000508940 USP19O94966 1318 aa34.27■■■■□ 3.08
PROM1-209ENST00000508940 TESK2Q96S53 571 aa34.26■■■■□ 3.08
PROM1-209ENST00000508940 KTN1Q86UP2 1357 aaKnown RBP34.25■■■■□ 3.07
PROM1-209ENST00000508940 TTC21BQ7Z4L5 1316 aa34.25■■■■□ 3.07
PROM1-209ENST00000508940 GLI3P10071 1580 aa34.24■■■■□ 3.07
PROM1-209ENST00000508940 SSH2Q76I76 1423 aa34.24■■■■□ 3.07
PROM1-209ENST00000508940 GCP02774 474 aa34.24■■■■□ 3.07
PROM1-209ENST00000508940 USP47Q96K76 1375 aa34.23■■■■□ 3.07
PROM1-209ENST00000508940 CPSF1Q10570 1443 aaKnown RBP34.23■■■■□ 3.07
PROM1-209ENST00000508940 HDGFL2Q7Z4V5 671 aaPredicted RBP34.23■■■■□ 3.07
PROM1-209ENST00000508940 TTC21AQ8NDW8 1320 aa34.23■■■■□ 3.07
PROM1-209ENST00000508940 AKAP12Q02952 1782 aa34.23■■■■□ 3.07
PROM1-209ENST00000508940 SLC12A5Q9H2X9 1139 aa34.21■■■■□ 3.07
PROM1-209ENST00000508940 NRAPQ86VF7 1730 aa34.2■■■■□ 3.07
PROM1-209ENST00000508940 EVA1CP58658 441 aa34.19■■■■□ 3.06
PROM1-209ENST00000508940 STRN4Q9NRL3 753 aa34.19■■■■□ 3.06
PROM1-209ENST00000508940 TERF2IPQ9NYB0 399 aa34.19■■■■□ 3.06
PROM1-209ENST00000508940 NRKQ7Z2Y5 1582 aa34.19■■■■□ 3.06
PROM1-209ENST00000508940 SEPT12Q8IYM1 358 aa34.18■■■■□ 3.06
PROM1-209ENST00000508940 CPDO75976 1380 aa34.18■■■■□ 3.06
PROM1-209ENST00000508940 A0A0G2JS52 829 aa34.17■■■■□ 3.06
PROM1-209ENST00000508940 TMF1P82094 1093 aa34.17■■■■□ 3.06
PROM1-209ENST00000508940 MYT1Q01538 1121 aa34.17■■■■□ 3.06
PROM1-209ENST00000508940 ZBTB7CA1YPR0 619 aa34.16■■■■□ 3.06
PROM1-209ENST00000508940 ONECUT3O60422 494 aaPredicted RBP34.15■■■■□ 3.06
PROM1-209ENST00000508940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.15■■■■□ 3.06
PROM1-209ENST00000508940 SPATA31A5Q5VU36 1347 aa34.14■■■■□ 3.06
PROM1-209ENST00000508940 SPATA31A7Q8IWB4 1347 aa34.14■■■■□ 3.06
PROM1-209ENST00000508940 PIK3C2AO00443 1686 aa34.14■■■■□ 3.06
PROM1-209ENST00000508940 FAM98CQ17RN3 349 aaKnown RBP34.13■■■■□ 3.05
PROM1-209ENST00000508940 KCNH5Q8NCM2 988 aa34.12■■■■□ 3.05
PROM1-209ENST00000508940 NINLQ9Y2I6 1382 aa34.11■■■■□ 3.05
PROM1-209ENST00000508940 MON2Q7Z3U7 1717 aa34.11■■■■□ 3.05
PROM1-209ENST00000508940 SLIT3O75094 1523 aa34.1■■■■□ 3.05
PROM1-209ENST00000508940 CD163L1Q9NR16 1453 aa34.1■■■■□ 3.05
PROM1-209ENST00000508940 CDCA8Q53HL2 280 aa34.09■■■■□ 3.05
PROM1-209ENST00000508940 SOX12O15370 315 aa34.08■■■■□ 3.05
PROM1-209ENST00000508940 SPATA31A1Q5TZJ5 1347 aa34.06■■■■□ 3.04
PROM1-209ENST00000508940 KRT27Q7Z3Y8 459 aa34.06■■■■□ 3.04
PROM1-209ENST00000508940 A0A1W2PP64 1363 aa34.06■■■■□ 3.04
PROM1-209ENST00000508940 CAMTA1Q9Y6Y1 1673 aa34.06■■■■□ 3.04
PROM1-209ENST00000508940 EDC4Q6P2E9 1401 aaKnown RBP34.05■■■■□ 3.04
PROM1-209ENST00000508940 NME9Q86XW9 330 aa34.05■■■■□ 3.04
PROM1-209ENST00000508940 USP35Q9P2H5 1018 aa34.04■■■■□ 3.04
PROM1-209ENST00000508940 BRWD3Q6RI45 1802 aa34.04■■■■□ 3.04
PROM1-209ENST00000508940 AATKQ6ZMQ8 1374 aa34.03■■■■□ 3.04
PROM1-209ENST00000508940 ZRANB1Q9UGI0 708 aa34.03■■■■□ 3.04
PROM1-209ENST00000508940 LARP1Q6PKG0 1096 aaKnown RBP34.02■■■■□ 3.04
PROM1-209ENST00000508940 LMO7Q8WWI1 1683 aa34.02■■■■□ 3.04
PROM1-209ENST00000508940 USP31Q70CQ4 1352 aa34.01■■■■□ 3.04
PROM1-209ENST00000508940 ARHGEF25Q86VW2 580 aa34■■■■□ 3.03
PROM1-209ENST00000508940 CCDC125Q86Z20 511 aa34■■■■□ 3.03
PROM1-209ENST00000508940 COL5A2P05997 1499 aaPredicted RBP33.96■■■■□ 3.03
PROM1-209ENST00000508940 TCP11L2Q8N4U5 519 aa33.96■■■■□ 3.03
PROM1-209ENST00000508940 EIF4G2P78344 907 aaKnown RBP eCLIP33.95■■■■□ 3.03
PROM1-209ENST00000508940 ANKRD36BQ8N2N9 1353 aa33.95■■■■□ 3.02
PROM1-209ENST00000508940 BARGINQ6ZT62 677 aa33.94■■■■□ 3.02
PROM1-209ENST00000508940 THRAP3Q9Y2W1 955 aaKnown RBP33.93■■■■□ 3.02
PROM1-209ENST00000508940 AXIN2Q9Y2T1 843 aa33.92■■■■□ 3.02
PROM1-209ENST00000508940 TOM1L2Q6ZVM7 507 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms