RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CALRP27797 417 aaKnown RBP4.99□□□□□ -1.61
NEDD4-209ENST00000508871 ISY1Q9ULR0 285 aaKnown RBP4.99□□□□□ -1.61
NEDD4-209ENST00000508871 VWDEQ8N2E2 1590 aa4.99□□□□□ -1.61
NEDD4-209ENST00000508871 REREQ9P2R6 1566 aa4.99□□□□□ -1.61
NEDD4-209ENST00000508871 NKX1-1Q15270 411 aaPredicted RBP4.99□□□□□ -1.61
NEDD4-209ENST00000508871 ARHGEF12Q9NZN5 1544 aa4.99□□□□□ -1.61
NEDD4-209ENST00000508871 HECW2Q9P2P5 1572 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.98□□□□□ -1.61
NEDD4-209ENST00000508871 BRD1O95696 1058 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 CNGA1P29973 690 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 ITGAEP38570 1179 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 SPHKAPQ2M3C7 1700 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 RICTORQ6R327 1708 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 NEO1Q92859 1461 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 ATP2B1P20020 1258 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 ZMYM4Q5VZL5 1548 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 AP1G2O75843 785 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 TSPYL2Q9H2G4 693 aaPredicted RBP4.98□□□□□ -1.61
NEDD4-209ENST00000508871 NCOA1Q15788 1441 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 PRDM15P57071 1507 aaPredicted RBP4.98□□□□□ -1.61
NEDD4-209ENST00000508871 PPM1FP49593 454 aaPredicted RBP4.98□□□□□ -1.61
NEDD4-209ENST00000508871 ZSWIM4Q9H7M6 989 aa4.98□□□□□ -1.61
NEDD4-209ENST00000508871 METTL14Q9HCE5 456 aaKnown RBP4.98□□□□□ -1.61
NEDD4-209ENST00000508871 ATP7AQ04656 1500 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 LMTK2Q8IWU2 1503 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 S100BP04271 92 aaPredicted RBP4.97□□□□□ -1.61
NEDD4-209ENST00000508871 PSME1Q06323 249 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 UBXN4Q92575 508 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 CAPN10Q9HC96 672 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 KIAA1210Q9ULL0 1709 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 FAM160A1Q05DH4 1040 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 VPS37DQ86XT2 251 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 PZPP20742 1482 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 CHMP4BP1P59074 171 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 PPRC1Q5VV67 1664 aaKnown RBP4.97□□□□□ -1.61
NEDD4-209ENST00000508871 MARSP56192 900 aaKnown RBP4.97□□□□□ -1.61
NEDD4-209ENST00000508871 CC2D2BQ6DHV5 1058 aa4.97□□□□□ -1.61
NEDD4-209ENST00000508871 ZCRB1Q8TBF4 217 aaKnown RBP4.97□□□□□ -1.61
NEDD4-209ENST00000508871 ZMYND10O75800 440 aa4.96□□□□□ -1.61
NEDD4-209ENST00000508871 ZHX3Q9H4I2 956 aa4.96□□□□□ -1.61
NEDD4-209ENST00000508871 ATP10AO60312 1499 aa4.96□□□□□ -1.61
NEDD4-209ENST00000508871 PNMA1Q8ND90 353 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 DDX27Q96GQ7 796 aaKnown RBP4.96□□□□□ -1.62
NEDD4-209ENST00000508871 CARNS1A5YM72 827 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 RALBP1Q15311 655 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 OSCARQ8IYS5 282 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 IFT172Q9UG01 1749 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 KIDINS220Q9ULH0 1771 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 NAALADL2Q58DX5 795 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 C9orf131Q5VYM1 1079 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 PBXIP1Q96AQ6 731 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 DENND4BO75064 1496 aaPredicted RBP4.96□□□□□ -1.62
NEDD4-209ENST00000508871 DIP2BQ9P265 1576 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 ASXL2Q76L83 1435 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 BIRC2Q13490 618 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 ZNF467Q7Z7K2 595 aaPredicted RBP4.96□□□□□ -1.62
NEDD4-209ENST00000508871 CNPY4Q8N129 248 aa4.96□□□□□ -1.62
NEDD4-209ENST00000508871 MPHOSPH6Q99547 160 aaKnown RBP4.96□□□□□ -1.62
NEDD4-209ENST00000508871 ESF1Q9H501 851 aaKnown RBP4.95□□□□□ -1.62
NEDD4-209ENST00000508871 SND1Q7KZF4 910 aaKnown RBP eCLIP4.95□□□□□ -1.62
NEDD4-209ENST00000508871 TEX2Q8IWB9 1127 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 RPRD2Q5VT52 1461 aaKnown RBP4.95□□□□□ -1.62
NEDD4-209ENST00000508871 CCDC125Q86Z20 511 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 SPATA32Q96LK8 384 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 CFDP1Q9UEE9 299 aaPredicted RBP4.95□□□□□ -1.62
NEDD4-209ENST00000508871 ZNF518AQ6AHZ1 1483 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 E9PCH4 1651 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 MCCP23508 829 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 MDM2Q00987 491 aaPredicted RBP4.95□□□□□ -1.62
NEDD4-209ENST00000508871 IRF5Q13568 498 aa4.95□□□□□ -1.62
NEDD4-209ENST00000508871 KIF13AQ9H1H9 1805 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 MPHOSPH10O00566 681 aaKnown RBP4.94□□□□□ -1.62
NEDD4-209ENST00000508871 NUTM1Q86Y26 1132 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 POM121Q96HA1 1249 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 CT47B1P0C2W7 299 aaPredicted RBP4.94□□□□□ -1.62
NEDD4-209ENST00000508871 ZC3H6P61129 1189 aaKnown RBP4.94□□□□□ -1.62
NEDD4-209ENST00000508871 DNAJC5Q9H3Z4 198 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 FANCAO15360 1455 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 TRPM2O94759 1503 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 TESPA1A2RU30 521 aaPredicted RBP4.94□□□□□ -1.62
NEDD4-209ENST00000508871 MROH1Q8NDA8 1641 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 ANKRD50Q9ULJ7 1429 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 USP5P45974 858 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 MAP3K9P80192 1104 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.94□□□□□ -1.62
NEDD4-209ENST00000508871 GLMNQ92990 594 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 CCDC102AQ96A19 550 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 SPOCK3Q9BQ16 436 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 KIF1BO60333 1816 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 SEMA3FQ13275 785 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 HDGFL1Q5TGJ6 251 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 VTI1AQ96AJ9 217 aa4.94□□□□□ -1.62
NEDD4-209ENST00000508871 TRIM44Q96DX7 344 aaPredicted RBP4.94□□□□□ -1.62
NEDD4-209ENST00000508871 MLH3Q9UHC1 1453 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 CAMSAP1Q5T5Y3 1602 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 TRPM1Q7Z4N2 1603 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 FRMPD1Q5SYB0 1578 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 ABCA6Q8N139 1617 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 AMOTL2Q9Y2J4 779 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 NRDCO43847 1150 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms