RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 POLR3AO14802 1390 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-227ENST00000508852 CENPJQ9HC77 1338 aaPredicted RBP19.55■□□□□ 0.72
CCHCR1-227ENST00000508852 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
CCHCR1-227ENST00000508852 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
CCHCR1-227ENST00000508852 NBPF1Q3BBV0 1214 aa19.54■□□□□ 0.72
CCHCR1-227ENST00000508852 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
CCHCR1-227ENST00000508852 BTG4Q9NY30 223 aa19.53■□□□□ 0.72
CCHCR1-227ENST00000508852 CRYBG1Q9Y4K1 1723 aa19.53■□□□□ 0.72
CCHCR1-227ENST00000508852 NRAPQ86VF7 1730 aa19.52■□□□□ 0.72
CCHCR1-227ENST00000508852 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
CCHCR1-227ENST00000508852 L3MBTL2Q969R5 705 aa19.52■□□□□ 0.72
CCHCR1-227ENST00000508852 ACEP12821 1306 aa19.51■□□□□ 0.71
CCHCR1-227ENST00000508852 BRWD3Q6RI45 1802 aa19.51■□□□□ 0.71
CCHCR1-227ENST00000508852 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-227ENST00000508852 SF3B2Q13435 895 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-227ENST00000508852 PRDM11Q9NQV5 511 aa19.51■□□□□ 0.71
CCHCR1-227ENST00000508852 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
CCHCR1-227ENST00000508852 EP400Q96L91 3159 aa19.5■□□□□ 0.71
CCHCR1-227ENST00000508852 QRICH2Q9H0J4 1663 aa19.5■□□□□ 0.71
CCHCR1-227ENST00000508852 KRT27Q7Z3Y8 459 aa19.49■□□□□ 0.71
CCHCR1-227ENST00000508852 TRPM1Q7Z4N2 1603 aa19.48■□□□□ 0.71
CCHCR1-227ENST00000508852 PHRF1Q9P1Y6 1649 aaKnown RBP19.48■□□□□ 0.71
CCHCR1-227ENST00000508852 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
CCHCR1-227ENST00000508852 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
CCHCR1-227ENST00000508852 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
CCHCR1-227ENST00000508852 A0A0G2JS52 829 aa19.46■□□□□ 0.71
CCHCR1-227ENST00000508852 MYT1Q01538 1121 aa19.46■□□□□ 0.71
CCHCR1-227ENST00000508852 ABTB2Q8N961 1025 aa19.46■□□□□ 0.71
CCHCR1-227ENST00000508852 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
CCHCR1-227ENST00000508852 SPATA31A5Q5VU36 1347 aa19.45■□□□□ 0.7
CCHCR1-227ENST00000508852 SPATA31A7Q8IWB4 1347 aa19.45■□□□□ 0.7
CCHCR1-227ENST00000508852 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
CCHCR1-227ENST00000508852 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
CCHCR1-227ENST00000508852 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
CCHCR1-227ENST00000508852 FAM98CQ17RN3 349 aaKnown RBP19.43■□□□□ 0.7
CCHCR1-227ENST00000508852 SIN3AQ96ST3 1273 aa19.43■□□□□ 0.7
CCHCR1-227ENST00000508852 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
CCHCR1-227ENST00000508852 CPDO75976 1380 aa19.42■□□□□ 0.7
CCHCR1-227ENST00000508852 EVA1CP58658 441 aa19.41■□□□□ 0.7
CCHCR1-227ENST00000508852 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
CCHCR1-227ENST00000508852 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-227ENST00000508852 USP19O94966 1318 aa19.4■□□□□ 0.7
CCHCR1-227ENST00000508852 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.69
CCHCR1-227ENST00000508852 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
CCHCR1-227ENST00000508852 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
CCHCR1-227ENST00000508852 NRKQ7Z2Y5 1582 aa19.39■□□□□ 0.69
CCHCR1-227ENST00000508852 USP6P35125 1406 aa19.38■□□□□ 0.69
CCHCR1-227ENST00000508852 THSD7AQ9UPZ6 1657 aa19.38■□□□□ 0.69
CCHCR1-227ENST00000508852 GCP02774 474 aa19.37■□□□□ 0.69
CCHCR1-227ENST00000508852 BAG6P46379 1132 aa19.37■□□□□ 0.69
CCHCR1-227ENST00000508852 CHRNA2Q15822 529 aa19.37■□□□□ 0.69
CCHCR1-227ENST00000508852 RGPD1P0DJD0 1748 aa19.37■□□□□ 0.69
CCHCR1-227ENST00000508852 STRN4Q9NRL3 753 aa19.36■□□□□ 0.69
CCHCR1-227ENST00000508852 THRAP3Q9Y2W1 955 aaKnown RBP19.36■□□□□ 0.69
CCHCR1-227ENST00000508852 SBNO2Q9Y2G9 1366 aa19.35■□□□□ 0.69
CCHCR1-227ENST00000508852 BARGINQ6ZT62 677 aa19.35■□□□□ 0.69
CCHCR1-227ENST00000508852 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
CCHCR1-227ENST00000508852 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
CCHCR1-227ENST00000508852 C11orf95C9JLR9 678 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-227ENST00000508852 NLRP6P59044 892 aa19.34■□□□□ 0.69
CCHCR1-227ENST00000508852 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.69
CCHCR1-227ENST00000508852 SLC24A1O60721 1099 aa19.33■□□□□ 0.68
CCHCR1-227ENST00000508852 FAM196AQ6ZSG2 479 aa19.33■□□□□ 0.68
CCHCR1-227ENST00000508852 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
CCHCR1-227ENST00000508852 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
CCHCR1-227ENST00000508852 KCNH5Q8NCM2 988 aa19.32■□□□□ 0.68
CCHCR1-227ENST00000508852 SLIT3O75094 1523 aa19.31■□□□□ 0.68
CCHCR1-227ENST00000508852 CAMTA1Q9Y6Y1 1673 aa19.31■□□□□ 0.68
CCHCR1-227ENST00000508852 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
CCHCR1-227ENST00000508852 CARD11Q9BXL7 1154 aa19.31■□□□□ 0.68
CCHCR1-227ENST00000508852 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
CCHCR1-227ENST00000508852 DEFB132Q7Z7B7 95 aa19.3■□□□□ 0.68
CCHCR1-227ENST00000508852 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
CCHCR1-227ENST00000508852 DISP2A7MBM2 1401 aa19.28■□□□□ 0.68
CCHCR1-227ENST00000508852 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
CCHCR1-227ENST00000508852 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
CCHCR1-227ENST00000508852 PUS7Q96PZ0 661 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-227ENST00000508852 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
CCHCR1-227ENST00000508852 COL5A2P05997 1499 aaPredicted RBP19.28■□□□□ 0.68
CCHCR1-227ENST00000508852 TTC21BQ7Z4L5 1316 aa19.27■□□□□ 0.68
CCHCR1-227ENST00000508852 CRB1P82279 1406 aa19.27■□□□□ 0.68
CCHCR1-227ENST00000508852 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
CCHCR1-227ENST00000508852 KTN1Q86UP2 1357 aaKnown RBP19.27■□□□□ 0.68
CCHCR1-227ENST00000508852 CPSF1Q10570 1443 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-227ENST00000508852 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
CCHCR1-227ENST00000508852 PARP4Q9UKK3 1724 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-227ENST00000508852 MON2Q7Z3U7 1717 aa19.24■□□□□ 0.67
CCHCR1-227ENST00000508852 TNS1Q9HBL0 1735 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-227ENST00000508852 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-227ENST00000508852 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-227ENST00000508852 ABCC6O95255 1503 aa19.23■□□□□ 0.67
CCHCR1-227ENST00000508852 ZBTB7CA1YPR0 619 aa19.22■□□□□ 0.67
CCHCR1-227ENST00000508852 COL18A1P39060 1754 aa19.21■□□□□ 0.67
CCHCR1-227ENST00000508852 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
CCHCR1-227ENST00000508852 TOM1L2Q6ZVM7 507 aa19.21■□□□□ 0.67
CCHCR1-227ENST00000508852 ARHGEF25Q86VW2 580 aa19.21■□□□□ 0.67
CCHCR1-227ENST00000508852 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
CCHCR1-227ENST00000508852 NINLQ9Y2I6 1382 aa19.2■□□□□ 0.66
CCHCR1-227ENST00000508852 EN1Q05925 392 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-227ENST00000508852 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms