RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-204ENST00000508828 MTHFSP49914 203 aa17.61■□□□□ 0.41
SPSB4-204ENST00000508828 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
SPSB4-204ENST00000508828 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
SPSB4-204ENST00000508828 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
SPSB4-204ENST00000508828 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
SPSB4-204ENST00000508828 COG3Q96JB2 828 aa17.59■□□□□ 0.41
SPSB4-204ENST00000508828 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
SPSB4-204ENST00000508828 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
SPSB4-204ENST00000508828 NME9Q86XW9 330 aa17.58■□□□□ 0.4
SPSB4-204ENST00000508828 NGDNQ8NEJ9 315 aaKnown RBP17.58■□□□□ 0.4
SPSB4-204ENST00000508828 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
SPSB4-204ENST00000508828 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
SPSB4-204ENST00000508828 AATKQ6ZMQ8 1374 aa17.56■□□□□ 0.4
SPSB4-204ENST00000508828 PROSER2Q86WR7 435 aaPredicted RBP17.56■□□□□ 0.4
SPSB4-204ENST00000508828 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
SPSB4-204ENST00000508828 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
SPSB4-204ENST00000508828 LTBP4Q8N2S1 1624 aa17.55■□□□□ 0.4
SPSB4-204ENST00000508828 PDE3BQ13370 1112 aa17.55■□□□□ 0.4
SPSB4-204ENST00000508828 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
SPSB4-204ENST00000508828 OVOS2A0A0J9YW53 1432 aa17.55■□□□□ 0.4
SPSB4-204ENST00000508828 OVOS2Q6IE36 1432 aa17.55■□□□□ 0.4
SPSB4-204ENST00000508828 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
SPSB4-204ENST00000508828 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
SPSB4-204ENST00000508828 NEFLP07196 543 aa17.52■□□□□ 0.4
SPSB4-204ENST00000508828 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
SPSB4-204ENST00000508828 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
SPSB4-204ENST00000508828 STRCP1A6NGW2 1772 aa17.52■□□□□ 0.4
SPSB4-204ENST00000508828 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
SPSB4-204ENST00000508828 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
SPSB4-204ENST00000508828 DCCP43146 1447 aa17.51■□□□□ 0.39
SPSB4-204ENST00000508828 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
SPSB4-204ENST00000508828 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
SPSB4-204ENST00000508828 LRRC7Q96NW7 1537 aa17.51■□□□□ 0.39
SPSB4-204ENST00000508828 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
SPSB4-204ENST00000508828 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
SPSB4-204ENST00000508828 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
SPSB4-204ENST00000508828 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
SPSB4-204ENST00000508828 PIK3C2AO00443 1686 aa17.49■□□□□ 0.39
SPSB4-204ENST00000508828 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
SPSB4-204ENST00000508828 DIAPH1O60610 1272 aaKnown RBP17.49■□□□□ 0.39
SPSB4-204ENST00000508828 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
SPSB4-204ENST00000508828 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
SPSB4-204ENST00000508828 TMEM94Q12767 1356 aa17.49■□□□□ 0.39
SPSB4-204ENST00000508828 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
SPSB4-204ENST00000508828 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
SPSB4-204ENST00000508828 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
SPSB4-204ENST00000508828 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
SPSB4-204ENST00000508828 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
SPSB4-204ENST00000508828 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
SPSB4-204ENST00000508828 C1orf167Q5SNV9 1468 aa17.45■□□□□ 0.38
SPSB4-204ENST00000508828 APAF1O14727 1248 aa17.45■□□□□ 0.38
SPSB4-204ENST00000508828 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
SPSB4-204ENST00000508828 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
SPSB4-204ENST00000508828 ATF3P18847 181 aa17.44■□□□□ 0.38
SPSB4-204ENST00000508828 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
SPSB4-204ENST00000508828 ZNF335Q9H4Z2 1342 aaPredicted RBP17.44■□□□□ 0.38
SPSB4-204ENST00000508828 MSH6P52701 1360 aa17.43■□□□□ 0.38
SPSB4-204ENST00000508828 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
SPSB4-204ENST00000508828 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
SPSB4-204ENST00000508828 MST1RQ04912 1400 aa17.42■□□□□ 0.38
SPSB4-204ENST00000508828 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
SPSB4-204ENST00000508828 MARF1Q9Y4F3 1742 aaKnown RBP17.41■□□□□ 0.38
SPSB4-204ENST00000508828 FBLN1P23142 703 aa17.41■□□□□ 0.38
SPSB4-204ENST00000508828 NLRP6P59044 892 aa17.41■□□□□ 0.38
SPSB4-204ENST00000508828 PSME1Q06323 249 aa17.41■□□□□ 0.38
SPSB4-204ENST00000508828 RRS1Q15050 365 aaKnown RBP17.41■□□□□ 0.38
SPSB4-204ENST00000508828 MAPK8IP3Q9UPT6 1336 aa17.41■□□□□ 0.38
SPSB4-204ENST00000508828 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
SPSB4-204ENST00000508828 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
SPSB4-204ENST00000508828 CADPS2Q86UW7 1296 aa17.4■□□□□ 0.38
SPSB4-204ENST00000508828 XIRP1Q702N8 1843 aaKnown RBP17.4■□□□□ 0.38
SPSB4-204ENST00000508828 TCP11L2Q8N4U5 519 aa17.39■□□□□ 0.37
SPSB4-204ENST00000508828 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
SPSB4-204ENST00000508828 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
SPSB4-204ENST00000508828 SBNO1A3KN83 1393 aa17.39■□□□□ 0.37
SPSB4-204ENST00000508828 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
SPSB4-204ENST00000508828 NEFMP07197 916 aa17.38■□□□□ 0.37
SPSB4-204ENST00000508828 IL13P35225 146 aa17.38■□□□□ 0.37
SPSB4-204ENST00000508828 FKBP8Q14318 412 aa17.38■□□□□ 0.37
SPSB4-204ENST00000508828 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
SPSB4-204ENST00000508828 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
SPSB4-204ENST00000508828 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
SPSB4-204ENST00000508828 FCHSD2O94868 740 aa17.37■□□□□ 0.37
SPSB4-204ENST00000508828 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
SPSB4-204ENST00000508828 FLT4P35916 1363 aa17.37■□□□□ 0.37
SPSB4-204ENST00000508828 UBAP1LF5GYI3 381 aa17.36■□□□□ 0.37
SPSB4-204ENST00000508828 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
SPSB4-204ENST00000508828 MAP3K19Q56UN5 1328 aa17.36■□□□□ 0.37
SPSB4-204ENST00000508828 E9PSI1 815 aa17.35■□□□□ 0.37
SPSB4-204ENST00000508828 SOX12O15370 315 aa17.35■□□□□ 0.37
SPSB4-204ENST00000508828 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
SPSB4-204ENST00000508828 FOXO3O43524 673 aa17.34■□□□□ 0.37
SPSB4-204ENST00000508828 SLFN5Q08AF3 891 aa17.34■□□□□ 0.37
SPSB4-204ENST00000508828 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
SPSB4-204ENST00000508828 AMPHP49418 695 aa17.33■□□□□ 0.36
SPSB4-204ENST00000508828 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
SPSB4-204ENST00000508828 WWC1Q8IX03 1113 aa17.33■□□□□ 0.36
SPSB4-204ENST00000508828 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
SPSB4-204ENST00000508828 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms