RNA–Protein interactions for RNA: ENST00000508681.5

SNCAIP-210, Transcript of synuclein alpha interacting protein, humanhuman

TSL 4

Gene SNCAIP, Length 420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-210ENST00000508681 MSH6P52701 1360 aa16.83■□□□□ 0.28
SNCAIP-210ENST00000508681 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
SNCAIP-210ENST00000508681 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-210ENST00000508681 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
SNCAIP-210ENST00000508681 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
SNCAIP-210ENST00000508681 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
SNCAIP-210ENST00000508681 TTC21BQ7Z4L5 1316 aa16.82■□□□□ 0.28
SNCAIP-210ENST00000508681 ATF3P18847 181 aa16.82■□□□□ 0.28
SNCAIP-210ENST00000508681 NGDNQ8NEJ9 315 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-210ENST00000508681 MST1RQ04912 1400 aa16.81■□□□□ 0.28
SNCAIP-210ENST00000508681 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
SNCAIP-210ENST00000508681 USP31Q70CQ4 1352 aa16.8■□□□□ 0.28
SNCAIP-210ENST00000508681 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
SNCAIP-210ENST00000508681 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
SNCAIP-210ENST00000508681 RBM33Q96EV2 1170 aaKnown RBP16.79■□□□□ 0.28
SNCAIP-210ENST00000508681 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
SNCAIP-210ENST00000508681 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
SNCAIP-210ENST00000508681 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
SNCAIP-210ENST00000508681 OVOS2A0A0J9YW53 1432 aa16.77■□□□□ 0.27
SNCAIP-210ENST00000508681 OVOS2Q6IE36 1432 aa16.77■□□□□ 0.27
SNCAIP-210ENST00000508681 ESCO1Q5FWF5 840 aa16.76■□□□□ 0.27
SNCAIP-210ENST00000508681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNCAIP-210ENST00000508681 COG3Q96JB2 828 aa16.76■□□□□ 0.27
SNCAIP-210ENST00000508681 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
SNCAIP-210ENST00000508681 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-210ENST00000508681 NME9Q86XW9 330 aa16.74■□□□□ 0.27
SNCAIP-210ENST00000508681 CFAP53Q96M91 514 aa16.74■□□□□ 0.27
SNCAIP-210ENST00000508681 MAP2P11137 1827 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-210ENST00000508681 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
SNCAIP-210ENST00000508681 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
SNCAIP-210ENST00000508681 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
SNCAIP-210ENST00000508681 MTHFSP49914 203 aa16.72■□□□□ 0.27
SNCAIP-210ENST00000508681 PSME1Q06323 249 aa16.72■□□□□ 0.27
SNCAIP-210ENST00000508681 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
SNCAIP-210ENST00000508681 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
SNCAIP-210ENST00000508681 MARF1Q9Y4F3 1742 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-210ENST00000508681 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
SNCAIP-210ENST00000508681 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
SNCAIP-210ENST00000508681 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-210ENST00000508681 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
SNCAIP-210ENST00000508681 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
SNCAIP-210ENST00000508681 CDK12Q9NYV4 1490 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-210ENST00000508681 SLAIN2Q9P270 581 aa16.68■□□□□ 0.26
SNCAIP-210ENST00000508681 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
SNCAIP-210ENST00000508681 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-210ENST00000508681 ALS2Q96Q42 1657 aa16.67■□□□□ 0.26
SNCAIP-210ENST00000508681 FOXO3O43524 673 aa16.67■□□□□ 0.26
SNCAIP-210ENST00000508681 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-210ENST00000508681 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNCAIP-210ENST00000508681 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
SNCAIP-210ENST00000508681 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
SNCAIP-210ENST00000508681 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
SNCAIP-210ENST00000508681 NLRP6P59044 892 aa16.65■□□□□ 0.26
SNCAIP-210ENST00000508681 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
SNCAIP-210ENST00000508681 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
SNCAIP-210ENST00000508681 PXDNQ92626 1479 aa16.65■□□□□ 0.26
SNCAIP-210ENST00000508681 BRINP3Q76B58 766 aa16.64■□□□□ 0.25
SNCAIP-210ENST00000508681 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
SNCAIP-210ENST00000508681 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
SNCAIP-210ENST00000508681 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
SNCAIP-210ENST00000508681 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
SNCAIP-210ENST00000508681 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-210ENST00000508681 HNRNPUQ00839 825 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNCAIP-210ENST00000508681 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-210ENST00000508681 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
SNCAIP-210ENST00000508681 SLIT3O75094 1523 aa16.63■□□□□ 0.25
SNCAIP-210ENST00000508681 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
SNCAIP-210ENST00000508681 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-210ENST00000508681 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
SNCAIP-210ENST00000508681 USP19O94966 1318 aa16.62■□□□□ 0.25
SNCAIP-210ENST00000508681 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
SNCAIP-210ENST00000508681 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-210ENST00000508681 RTL1A6NKG5 1358 aa16.6■□□□□ 0.25
SNCAIP-210ENST00000508681 ARHGEF10O15013 1369 aa16.6■□□□□ 0.25
SNCAIP-210ENST00000508681 NFAT5O94916 1531 aa16.6■□□□□ 0.25
SNCAIP-210ENST00000508681 NEFLP07196 543 aa16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 SPATA31A3Q5VYP0 1347 aa16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 FLT4P35916 1363 aa16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 MED1Q15648 1581 aaPredicted RBP16.59■□□□□ 0.25
SNCAIP-210ENST00000508681 PEAK1Q9H792 1746 aa16.58■□□□□ 0.24
SNCAIP-210ENST00000508681 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
SNCAIP-210ENST00000508681 IL13P35225 146 aa16.57■□□□□ 0.24
SNCAIP-210ENST00000508681 FCHSD2O94868 740 aa16.56■□□□□ 0.24
SNCAIP-210ENST00000508681 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-210ENST00000508681 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
SNCAIP-210ENST00000508681 LTN1O94822 1766 aa16.56■□□□□ 0.24
SNCAIP-210ENST00000508681 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
SNCAIP-210ENST00000508681 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-210ENST00000508681 ABCC6O95255 1503 aa16.55■□□□□ 0.24
SNCAIP-210ENST00000508681 FBLN1P23142 703 aa16.55■□□□□ 0.24
SNCAIP-210ENST00000508681 GCP02774 474 aa16.54■□□□□ 0.24
SNCAIP-210ENST00000508681 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
SNCAIP-210ENST00000508681 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
SNCAIP-210ENST00000508681 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
SNCAIP-210ENST00000508681 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
SNCAIP-210ENST00000508681 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNCAIP-210ENST00000508681 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms