RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 RSPH4AQ5TD94 716 aa10.82□□□□□ -0.68
KLHL3-209ENST00000508657 HOMER1Q86YM7 354 aa10.82□□□□□ -0.68
KLHL3-209ENST00000508657 HOOK1Q9UJC3 728 aaKnown RBP10.82□□□□□ -0.68
KLHL3-209ENST00000508657 C6orf229H3BNL8 230 aa10.82□□□□□ -0.68
KLHL3-209ENST00000508657 EP400NLQ6ZTU2 488 aa10.81□□□□□ -0.68
KLHL3-209ENST00000508657 SURF6O75683 361 aaKnown RBP10.81□□□□□ -0.68
KLHL3-209ENST00000508657 CCDC57Q2TAC2 916 aa10.81□□□□□ -0.68
KLHL3-209ENST00000508657 DHX37Q8IY37 1157 aaKnown RBP10.81□□□□□ -0.68
KLHL3-209ENST00000508657 USHBP1Q8N6Y0 703 aa10.81□□□□□ -0.68
KLHL3-209ENST00000508657 NLRP13Q86W25 1043 aa10.81□□□□□ -0.68
KLHL3-209ENST00000508657 LRP2BPQ9P2M1 347 aa10.81□□□□□ -0.68
KLHL3-209ENST00000508657 STK3Q13188 491 aa10.81□□□□□ -0.68
KLHL3-209ENST00000508657 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 ERC2O15083 957 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 C1orf115Q9H7X2 142 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
KLHL3-209ENST00000508657 TANGO6Q9C0B7 1094 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 RFX1P22670 979 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 RAB3GAP2Q9H2M9 1393 aa10.8□□□□□ -0.68
KLHL3-209ENST00000508657 TMOD3Q9NYL9 352 aa10.79□□□□□ -0.68
KLHL3-209ENST00000508657 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
KLHL3-209ENST00000508657 POLR3DP05423 398 aaPredicted RBP10.79□□□□□ -0.68
KLHL3-209ENST00000508657 NEFHP12036 1026 aa10.79□□□□□ -0.68
KLHL3-209ENST00000508657 HSP90AB4PQ58FF6 505 aa10.79□□□□□ -0.68
KLHL3-209ENST00000508657 SMC3Q9UQE7 1217 aa10.79□□□□□ -0.68
KLHL3-209ENST00000508657 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
KLHL3-209ENST00000508657 RRS1Q15050 365 aaKnown RBP10.79□□□□□ -0.68
KLHL3-209ENST00000508657 LNPKQ9C0E8 428 aa10.79□□□□□ -0.68
KLHL3-209ENST00000508657 TDO2P48775 406 aa10.78□□□□□ -0.68
KLHL3-209ENST00000508657 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
KLHL3-209ENST00000508657 FEZ1Q99689 392 aa10.78□□□□□ -0.68
KLHL3-209ENST00000508657 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
KLHL3-209ENST00000508657 SULT6B1Q6IMI4 303 aa10.78□□□□□ -0.68
KLHL3-209ENST00000508657 BTBD11A6QL63 1104 aa10.77□□□□□ -0.68
KLHL3-209ENST00000508657 F8W031 263 aaPredicted RBP10.77□□□□□ -0.69
KLHL3-209ENST00000508657 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
KLHL3-209ENST00000508657 BEGAINQ9BUH8 593 aa10.77□□□□□ -0.69
KLHL3-209ENST00000508657 DDX49Q9Y6V7 483 aaKnown RBP10.77□□□□□ -0.69
KLHL3-209ENST00000508657 CCDC69A6NI79 296 aa10.77□□□□□ -0.69
KLHL3-209ENST00000508657 CDK19Q9BWU1 502 aa10.77□□□□□ -0.69
KLHL3-209ENST00000508657 CCDC30Q5VVM6 783 aa10.77□□□□□ -0.69
KLHL3-209ENST00000508657 CAGE1Q8TC20 777 aa10.77□□□□□ -0.69
KLHL3-209ENST00000508657 IDH1O75874 414 aaKnown RBP10.76□□□□□ -0.69
KLHL3-209ENST00000508657 CCDC96Q2M329 555 aa10.76□□□□□ -0.69
KLHL3-209ENST00000508657 GPTP24298 496 aa10.76□□□□□ -0.69
KLHL3-209ENST00000508657 ERC1Q8IUD2 1116 aa10.76□□□□□ -0.69
KLHL3-209ENST00000508657 RFC4P35249 363 aa10.76□□□□□ -0.69
KLHL3-209ENST00000508657 GOLGA6L3A6NEY3 463 aa10.76□□□□□ -0.69
KLHL3-209ENST00000508657 API5Q9BZZ5 524 aaKnown RBP10.76□□□□□ -0.69
KLHL3-209ENST00000508657 PTMSP20962 102 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 MIS18AQ9NYP9 233 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 FOXO3O43524 673 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
KLHL3-209ENST00000508657 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
KLHL3-209ENST00000508657 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.75□□□□□ -0.69
KLHL3-209ENST00000508657 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 MINDY4BA8MYZ0 360 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 STARD3NLO95772 234 aa10.75□□□□□ -0.69
KLHL3-209ENST00000508657 DHX8Q14562 1220 aaKnown RBP10.74□□□□□ -0.69
KLHL3-209ENST00000508657 OLFM4Q6UX06 510 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 MAGEC2Q9UBF1 373 aaPredicted RBP10.74□□□□□ -0.69
KLHL3-209ENST00000508657 GAS2L2Q8NHY3 880 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 CABP1Q9NZU7 370 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 GNAI1P63096 354 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 ATP6V1DQ9Y5K8 247 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 POLD1P28340 1107 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 PRKAR2BP31323 418 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
KLHL3-209ENST00000508657 CNTROBQ8N137 903 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 CLASRPQ8N2M8 674 aaKnown RBP10.74□□□□□ -0.69
KLHL3-209ENST00000508657 CFAP70Q5T0N1 1121 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 ZNF652Q9Y2D9 606 aa10.74□□□□□ -0.69
KLHL3-209ENST00000508657 PLS1Q14651 629 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 CCDC73Q6ZRK6 1079 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
KLHL3-209ENST00000508657 RUFY1Q96T51 708 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 ZMYND15Q9H091 742 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 MIA2Q96PC5 1412 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.69
KLHL3-209ENST00000508657 TXLNAP40222 546 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 NACAP1Q9BZK3 213 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 CHRNA2Q15822 529 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
KLHL3-209ENST00000508657 EXOC5O00471 708 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 METTL24Q5JXM2 366 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 REC8O95072 547 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 MKNK2Q9HBH9 465 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
KLHL3-209ENST00000508657 KIF15Q9NS87 1388 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 CCDC173Q0VFZ6 552 aa10.72□□□□□ -0.69
KLHL3-209ENST00000508657 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
KLHL3-209ENST00000508657 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
KLHL3-209ENST00000508657 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.69
KLHL3-209ENST00000508657 SDF4Q9BRK5 362 aa10.71□□□□□ -0.69
KLHL3-209ENST00000508657 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms