RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 MAP10Q9P2G4 905 aa9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 F12P00748 615 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-211ENST00000508531 BCANQ96GW7 911 aa9.58□□□□□ -0.88
PDLIM5-211ENST00000508531 TLL2Q9Y6L7 1015 aa9.58□□□□□ -0.88
PDLIM5-211ENST00000508531 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
PDLIM5-211ENST00000508531 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-211ENST00000508531 LILRB3O75022 631 aa9.57□□□□□ -0.88
PDLIM5-211ENST00000508531 CLK2P49760 499 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-211ENST00000508531 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
PDLIM5-211ENST00000508531 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-211ENST00000508531 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
PDLIM5-211ENST00000508531 VARSP26640 1264 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-211ENST00000508531 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-211ENST00000508531 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
PDLIM5-211ENST00000508531 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
PDLIM5-211ENST00000508531 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
PDLIM5-211ENST00000508531 SNRPBP14678 240 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-211ENST00000508531 SENP2Q9HC62 589 aa9.52□□□□□ -0.89
PDLIM5-211ENST00000508531 PLEKHG3A1L390 1219 aa9.51□□□□□ -0.89
PDLIM5-211ENST00000508531 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-211ENST00000508531 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-211ENST00000508531 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
PDLIM5-211ENST00000508531 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
PDLIM5-211ENST00000508531 BMP1P13497 986 aa9.5□□□□□ -0.89
PDLIM5-211ENST00000508531 NNTQ13423 1086 aa9.5□□□□□ -0.89
PDLIM5-211ENST00000508531 AGERQ15109 404 aa9.5□□□□□ -0.89
PDLIM5-211ENST00000508531 TREML4Q6UXN2 200 aa9.5□□□□□ -0.89
PDLIM5-211ENST00000508531 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
PDLIM5-211ENST00000508531 MPNDQ8N594 471 aa9.49□□□□□ -0.89
PDLIM5-211ENST00000508531 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
PDLIM5-211ENST00000508531 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
PDLIM5-211ENST00000508531 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
PDLIM5-211ENST00000508531 KIFC2Q96AC6 838 aa9.48□□□□□ -0.89
PDLIM5-211ENST00000508531 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
PDLIM5-211ENST00000508531 ADH1CP00326 375 aa9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 CTDSPL2Q05D32 466 aa9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 LCE2AQ5TA79 106 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 BPHLQ86WA6 291 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 ATP1B4Q9UN42 357 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-211ENST00000508531 WFS1O76024 890 aa9.45□□□□□ -0.9
PDLIM5-211ENST00000508531 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
PDLIM5-211ENST00000508531 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-211ENST00000508531 ARMC2Q8NEN0 867 aa9.45□□□□□ -0.9
PDLIM5-211ENST00000508531 DDRGK1Q96HY6 314 aa9.45□□□□□ -0.9
PDLIM5-211ENST00000508531 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-211ENST00000508531 CDK15Q96Q40 435 aa9.44□□□□□ -0.9
PDLIM5-211ENST00000508531 TIMP2P16035 220 aa9.43□□□□□ -0.9
PDLIM5-211ENST00000508531 NFX1Q12986 1120 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-211ENST00000508531 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
PDLIM5-211ENST00000508531 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
PDLIM5-211ENST00000508531 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
PDLIM5-211ENST00000508531 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
PDLIM5-211ENST00000508531 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
PDLIM5-211ENST00000508531 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDLIM5-211ENST00000508531 NR3C2P08235 984 aa9.4□□□□□ -0.9
PDLIM5-211ENST00000508531 GRM5P41594 1212 aa9.4□□□□□ -0.9
PDLIM5-211ENST00000508531 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
PDLIM5-211ENST00000508531 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
PDLIM5-211ENST00000508531 KLF16Q9BXK1 252 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-211ENST00000508531 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
PDLIM5-211ENST00000508531 TERTO14746 1132 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-211ENST00000508531 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-211ENST00000508531 NR5A1Q13285 461 aa9.39□□□□□ -0.91
PDLIM5-211ENST00000508531 MRPL14Q6P1L8 145 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-211ENST00000508531 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
PDLIM5-211ENST00000508531 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
PDLIM5-211ENST00000508531 ITPKCQ96DU7 683 aa9.38□□□□□ -0.91
PDLIM5-211ENST00000508531 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-211ENST00000508531 AP1G2O75843 785 aa9.37□□□□□ -0.91
PDLIM5-211ENST00000508531 FSHRP23945 695 aa9.37□□□□□ -0.91
PDLIM5-211ENST00000508531 NR6A1Q15406 480 aa9.37□□□□□ -0.91
PDLIM5-211ENST00000508531 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
PDLIM5-211ENST00000508531 VASH1Q7L8A9 365 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-211ENST00000508531 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.91
PDLIM5-211ENST00000508531 SCARF1Q14162 830 aa9.36□□□□□ -0.91
PDLIM5-211ENST00000508531 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-211ENST00000508531 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
PDLIM5-211ENST00000508531 MAP4K5Q9Y4K4 846 aa9.35□□□□□ -0.91
PDLIM5-211ENST00000508531 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
PDLIM5-211ENST00000508531 ARHGAP9Q9BRR9 750 aa9.34□□□□□ -0.91
PDLIM5-211ENST00000508531 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-211ENST00000508531 C6orf118Q5T5N4 469 aa9.33□□□□□ -0.92
PDLIM5-211ENST00000508531 PDXDC2PQ6P474 469 aa9.33□□□□□ -0.92
PDLIM5-211ENST00000508531 SOBPA7XYQ1 873 aa9.32□□□□□ -0.92
PDLIM5-211ENST00000508531 VEGFBP49765 207 aa9.32□□□□□ -0.92
PDLIM5-211ENST00000508531 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
PDLIM5-211ENST00000508531 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
PDLIM5-211ENST00000508531 USP17L8P0C7I0 530 aa9.31□□□□□ -0.92
PDLIM5-211ENST00000508531 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
PDLIM5-211ENST00000508531 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-211ENST00000508531 WIPF1O43516 503 aa9.3□□□□□ -0.92
PDLIM5-211ENST00000508531 RFC5P40937 340 aa9.3□□□□□ -0.92
PDLIM5-211ENST00000508531 ZBTB33Q86T24 672 aa9.3□□□□□ -0.92
PDLIM5-211ENST00000508531 CCDC116Q8IYX3 515 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms