RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 CCDC9Q9Y3X0 531 aaKnown RBP26.04■■□□□ 1.76
SKP2-204ENST00000508514 KIAA1210Q9ULL0 1709 aa26.03■■□□□ 1.76
SKP2-204ENST00000508514 CRYBG1Q9Y4K1 1723 aa26.03■■□□□ 1.76
SKP2-204ENST00000508514 NRAPQ86VF7 1730 aa26.02■■□□□ 1.76
SKP2-204ENST00000508514 POLR3AO14802 1390 aaPredicted RBP26■■□□□ 1.75
SKP2-204ENST00000508514 CCDC61Q9Y6R9 512 aa26■■□□□ 1.75
SKP2-204ENST00000508514 ACEP12821 1306 aa25.99■■□□□ 1.75
SKP2-204ENST00000508514 PLEKHG3A1L390 1219 aa25.99■■□□□ 1.75
SKP2-204ENST00000508514 NBPF8Q3BBV2 869 aa25.99■■□□□ 1.75
SKP2-204ENST00000508514 BLMP54132 1417 aaPredicted RBP25.98■■□□□ 1.75
SKP2-204ENST00000508514 COL14A1Q05707 1796 aaKnown RBP25.98■■□□□ 1.75
SKP2-204ENST00000508514 FAM98CQ17RN3 349 aaKnown RBP25.97■■□□□ 1.75
SKP2-204ENST00000508514 NUTM2GQ5VZR2 741 aa25.97■■□□□ 1.75
SKP2-204ENST00000508514 KRT27Q7Z3Y8 459 aa25.97■■□□□ 1.75
SKP2-204ENST00000508514 L3MBTL2Q969R5 705 aa25.97■■□□□ 1.75
SKP2-204ENST00000508514 ITSN1Q15811 1721 aa25.97■■□□□ 1.75
SKP2-204ENST00000508514 TOPAZ1Q8N9V7 1692 aa25.96■■□□□ 1.75
SKP2-204ENST00000508514 DEFB132Q7Z7B7 95 aa25.96■■□□□ 1.75
SKP2-204ENST00000508514 SPATA31A5Q5VU36 1347 aa25.95■■□□□ 1.75
SKP2-204ENST00000508514 SPATA31A7Q8IWB4 1347 aa25.95■■□□□ 1.75
SKP2-204ENST00000508514 SIN3AQ96ST3 1273 aa25.95■■□□□ 1.74
SKP2-204ENST00000508514 KIAA0232Q92628 1395 aa25.95■■□□□ 1.74
SKP2-204ENST00000508514 PRDM11Q9NQV5 511 aa25.94■■□□□ 1.74
SKP2-204ENST00000508514 ZRANB1Q9UGI0 708 aa25.94■■□□□ 1.74
SKP2-204ENST00000508514 CHRNA2Q15822 529 aa25.93■■□□□ 1.74
SKP2-204ENST00000508514 CENPJQ9HC77 1338 aaPredicted RBP25.92■■□□□ 1.74
SKP2-204ENST00000508514 CABP2Q9NPB3 220 aa25.92■■□□□ 1.74
SKP2-204ENST00000508514 ZC3H6P61129 1189 aaKnown RBP25.91■■□□□ 1.74
SKP2-204ENST00000508514 PHRF1Q9P1Y6 1649 aaKnown RBP25.88■■□□□ 1.73
SKP2-204ENST00000508514 A0A0G2JS52 829 aa25.88■■□□□ 1.73
SKP2-204ENST00000508514 SRPK2P78362 688 aaKnown RBP25.88■■□□□ 1.73
SKP2-204ENST00000508514 MYT1Q01538 1121 aa25.88■■□□□ 1.73
SKP2-204ENST00000508514 FAM182BQ5T319 152 aa25.88■■□□□ 1.73
SKP2-204ENST00000508514 PPIP5K1Q6PFW1 1433 aa25.87■■□□□ 1.73
SKP2-204ENST00000508514 SPATA31A1Q5TZJ5 1347 aa25.87■■□□□ 1.73
SKP2-204ENST00000508514 ABTB2Q8N961 1025 aa25.86■■□□□ 1.73
SKP2-204ENST00000508514 USP19O94966 1318 aa25.85■■□□□ 1.73
SKP2-204ENST00000508514 THSD7AQ9UPZ6 1657 aa25.84■■□□□ 1.73
SKP2-204ENST00000508514 NEUROD1Q13562 356 aa25.83■■□□□ 1.73
SKP2-204ENST00000508514 STRN4Q9NRL3 753 aa25.83■■□□□ 1.73
SKP2-204ENST00000508514 CABP1Q9NZU7 370 aa25.83■■□□□ 1.73
SKP2-204ENST00000508514 SF3B2Q13435 895 aaKnown RBP25.82■■□□□ 1.72
SKP2-204ENST00000508514 QRICH2Q9H0J4 1663 aa25.82■■□□□ 1.72
SKP2-204ENST00000508514 NRKQ7Z2Y5 1582 aa25.82■■□□□ 1.72
SKP2-204ENST00000508514 CAMTA1Q9Y6Y1 1673 aa25.81■■□□□ 1.72
SKP2-204ENST00000508514 CPDO75976 1380 aa25.8■■□□□ 1.72
SKP2-204ENST00000508514 TRPM1Q7Z4N2 1603 aa25.79■■□□□ 1.72
SKP2-204ENST00000508514 GCP02774 474 aa25.79■■□□□ 1.72
SKP2-204ENST00000508514 LARP1Q6PKG0 1096 aaKnown RBP25.78■■□□□ 1.72
SKP2-204ENST00000508514 SSH2Q76I76 1423 aa25.78■■□□□ 1.72
SKP2-204ENST00000508514 NLRP13Q86W25 1043 aa25.77■■□□□ 1.72
SKP2-204ENST00000508514 USP6P35125 1406 aa25.77■■□□□ 1.72
SKP2-204ENST00000508514 USP35Q9P2H5 1018 aa25.76■■□□□ 1.71
SKP2-204ENST00000508514 LMO7Q8WWI1 1683 aa25.76■■□□□ 1.71
SKP2-204ENST00000508514 EVA1CP58658 441 aa25.75■■□□□ 1.71
SKP2-204ENST00000508514 BRD4O60885 1362 aaPredicted RBP25.74■■□□□ 1.71
SKP2-204ENST00000508514 EN1Q05925 392 aaPredicted RBP25.74■■□□□ 1.71
SKP2-204ENST00000508514 BARGINQ6ZT62 677 aa25.74■■□□□ 1.71
SKP2-204ENST00000508514 ROCK2O75116 1388 aaKnown RBP25.73■■□□□ 1.71
SKP2-204ENST00000508514 EVC2Q86UK5 1308 aa25.73■■□□□ 1.71
SKP2-204ENST00000508514 BAG6P46379 1132 aa25.73■■□□□ 1.71
SKP2-204ENST00000508514 NLRP6P59044 892 aa25.71■■□□□ 1.71
SKP2-204ENST00000508514 TCP11L2Q8N4U5 519 aa25.69■■□□□ 1.7
SKP2-204ENST00000508514 COL5A2P05997 1499 aaPredicted RBP25.68■■□□□ 1.7
SKP2-204ENST00000508514 DISP2A7MBM2 1401 aa25.68■■□□□ 1.7
SKP2-204ENST00000508514 SLIT3O75094 1523 aa25.68■■□□□ 1.7
SKP2-204ENST00000508514 PSDA5PKW4 1024 aaPredicted RBP25.67■■□□□ 1.7
SKP2-204ENST00000508514 TRIM37O94972 964 aa25.67■■□□□ 1.7
SKP2-204ENST00000508514 FAM196AQ6ZSG2 479 aa25.67■■□□□ 1.7
SKP2-204ENST00000508514 RGPD1P0DJD0 1748 aa25.66■■□□□ 1.7
SKP2-204ENST00000508514 TNS1Q9HBL0 1735 aaKnown RBP25.66■■□□□ 1.7
SKP2-204ENST00000508514 PIK3C2AO00443 1686 aa25.66■■□□□ 1.7
SKP2-204ENST00000508514 EZH2Q15910 746 aaKnown RBP25.65■■□□□ 1.7
SKP2-204ENST00000508514 TTC21BQ7Z4L5 1316 aa25.64■■□□□ 1.7
SKP2-204ENST00000508514 CAMKK2Q96RR4 588 aa25.64■■□□□ 1.7
SKP2-204ENST00000508514 AXIN2Q9Y2T1 843 aa25.64■■□□□ 1.7
SKP2-204ENST00000508514 AATKQ6ZMQ8 1374 aa25.64■■□□□ 1.69
SKP2-204ENST00000508514 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
SKP2-204ENST00000508514 ZNF692Q9BU19 519 aaPredicted RBP25.63■■□□□ 1.69
SKP2-204ENST00000508514 THRAP3Q9Y2W1 955 aaKnown RBP25.63■■□□□ 1.69
SKP2-204ENST00000508514 ZBTB7CA1YPR0 619 aa25.62■■□□□ 1.69
SKP2-204ENST00000508514 COL18A1P39060 1754 aa25.61■■□□□ 1.69
SKP2-204ENST00000508514 PDE3BQ13370 1112 aa25.61■■□□□ 1.69
SKP2-204ENST00000508514 CRB1P82279 1406 aa25.6■■□□□ 1.69
SKP2-204ENST00000508514 ARHGEF25Q86VW2 580 aa25.59■■□□□ 1.69
SKP2-204ENST00000508514 APBA3O96018 575 aa25.58■■□□□ 1.69
SKP2-204ENST00000508514 AKAP12Q02952 1782 aa25.58■■□□□ 1.69
SKP2-204ENST00000508514 SBNO2Q9Y2G9 1366 aa25.57■■□□□ 1.68
SKP2-204ENST00000508514 R3HDM1Q15032 1099 aaKnown RBP25.57■■□□□ 1.68
SKP2-204ENST00000508514 CARD11Q9BXL7 1154 aa25.57■■□□□ 1.68
SKP2-204ENST00000508514 TTC21AQ8NDW8 1320 aa25.55■■□□□ 1.68
SKP2-204ENST00000508514 KTN1Q86UP2 1357 aaKnown RBP25.55■■□□□ 1.68
SKP2-204ENST00000508514 PARP4Q9UKK3 1724 aaKnown RBP25.54■■□□□ 1.68
SKP2-204ENST00000508514 CD163L1Q9NR16 1453 aa25.54■■□□□ 1.68
SKP2-204ENST00000508514 LRP5O75197 1615 aa25.54■■□□□ 1.68
SKP2-204ENST00000508514 SOX12O15370 315 aa25.53■■□□□ 1.68
SKP2-204ENST00000508514 KCNH5Q8NCM2 988 aa25.53■■□□□ 1.68
SKP2-204ENST00000508514 TOM1L2Q6ZVM7 507 aa25.52■■□□□ 1.68
SKP2-204ENST00000508514 WDR17Q8IZU2 1322 aa25.52■■□□□ 1.68
SKP2-204ENST00000508514 NFAT5O94916 1531 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms