RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
DDR1-263ENST00000508317 SRPK2P78362 688 aaKnown RBP23.55■■□□□ 1.36
DDR1-263ENST00000508317 KRT27Q7Z3Y8 459 aa23.55■■□□□ 1.36
DDR1-263ENST00000508317 PSDA5PKW4 1024 aaPredicted RBP23.53■■□□□ 1.36
DDR1-263ENST00000508317 ONECUT3O60422 494 aaPredicted RBP23.5■■□□□ 1.35
DDR1-263ENST00000508317 FAM98CQ17RN3 349 aaKnown RBP23.5■■□□□ 1.35
DDR1-263ENST00000508317 CENPJQ9HC77 1338 aaPredicted RBP23.5■■□□□ 1.35
DDR1-263ENST00000508317 EVA1CP58658 441 aa23.49■■□□□ 1.35
DDR1-263ENST00000508317 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
DDR1-263ENST00000508317 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
DDR1-263ENST00000508317 ABTB2Q8N961 1025 aa23.48■■□□□ 1.35
DDR1-263ENST00000508317 ACEP12821 1306 aa23.48■■□□□ 1.35
DDR1-263ENST00000508317 BAG6P46379 1132 aa23.46■■□□□ 1.35
DDR1-263ENST00000508317 ATP7BP35670 1465 aa23.45■■□□□ 1.34
DDR1-263ENST00000508317 PLEKHG3A1L390 1219 aa23.45■■□□□ 1.34
DDR1-263ENST00000508317 NBPF1Q3BBV0 1214 aa23.45■■□□□ 1.34
DDR1-263ENST00000508317 NUTM2GQ5VZR2 741 aa23.45■■□□□ 1.34
DDR1-263ENST00000508317 STRN4Q9NRL3 753 aa23.45■■□□□ 1.34
DDR1-263ENST00000508317 ZC3H6P61129 1189 aaKnown RBP23.44■■□□□ 1.34
DDR1-263ENST00000508317 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
DDR1-263ENST00000508317 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
DDR1-263ENST00000508317 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
DDR1-263ENST00000508317 SPATA31A5Q5VU36 1347 aa23.42■■□□□ 1.34
DDR1-263ENST00000508317 SPATA31A7Q8IWB4 1347 aa23.42■■□□□ 1.34
DDR1-263ENST00000508317 POLR3AO14802 1390 aaPredicted RBP23.41■■□□□ 1.34
DDR1-263ENST00000508317 KIAA0232Q92628 1395 aa23.41■■□□□ 1.34
DDR1-263ENST00000508317 EVC2Q86UK5 1308 aa23.4■■□□□ 1.34
DDR1-263ENST00000508317 CHRNA2Q15822 529 aa23.4■■□□□ 1.34
DDR1-263ENST00000508317 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
DDR1-263ENST00000508317 PLCH1Q4KWH8 1693 aa23.4■■□□□ 1.34
DDR1-263ENST00000508317 COL14A1Q05707 1796 aaKnown RBP23.4■■□□□ 1.34
DDR1-263ENST00000508317 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
DDR1-263ENST00000508317 ITSN1Q15811 1721 aa23.39■■□□□ 1.34
DDR1-263ENST00000508317 CABP2Q9NPB3 220 aa23.39■■□□□ 1.33
DDR1-263ENST00000508317 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
DDR1-263ENST00000508317 KIAA1210Q9ULL0 1709 aa23.38■■□□□ 1.33
DDR1-263ENST00000508317 TRPM3Q9HCF6 1732 aaPredicted RBP23.37■■□□□ 1.33
DDR1-263ENST00000508317 PPIP5K1Q6PFW1 1433 aa23.37■■□□□ 1.33
DDR1-263ENST00000508317 PDE3BQ13370 1112 aa23.36■■□□□ 1.33
DDR1-263ENST00000508317 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
DDR1-263ENST00000508317 ROCK2O75116 1388 aaKnown RBP23.36■■□□□ 1.33
DDR1-263ENST00000508317 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
DDR1-263ENST00000508317 ZBTB7CA1YPR0 619 aa23.35■■□□□ 1.33
DDR1-263ENST00000508317 SPATA31A1Q5TZJ5 1347 aa23.34■■□□□ 1.33
DDR1-263ENST00000508317 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
DDR1-263ENST00000508317 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
DDR1-263ENST00000508317 FAM196AQ6ZSG2 479 aa23.34■■□□□ 1.33
DDR1-263ENST00000508317 CABP1Q9NZU7 370 aa23.34■■□□□ 1.33
DDR1-263ENST00000508317 NLRP6P59044 892 aa23.33■■□□□ 1.33
DDR1-263ENST00000508317 R3HDM1Q15032 1099 aaKnown RBP23.33■■□□□ 1.33
DDR1-263ENST00000508317 GCP02774 474 aa23.32■■□□□ 1.32
DDR1-263ENST00000508317 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
DDR1-263ENST00000508317 ZNF692Q9BU19 519 aaPredicted RBP23.32■■□□□ 1.32
DDR1-263ENST00000508317 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
DDR1-263ENST00000508317 TCP11L2Q8N4U5 519 aa23.3■■□□□ 1.32
DDR1-263ENST00000508317 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
DDR1-263ENST00000508317 NRAPQ86VF7 1730 aa23.29■■□□□ 1.32
DDR1-263ENST00000508317 THRAP3Q9Y2W1 955 aaKnown RBP23.29■■□□□ 1.32
DDR1-263ENST00000508317 CPDO75976 1380 aa23.28■■□□□ 1.32
DDR1-263ENST00000508317 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
DDR1-263ENST00000508317 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
DDR1-263ENST00000508317 USP19O94966 1318 aa23.28■■□□□ 1.32
DDR1-263ENST00000508317 DISP2A7MBM2 1401 aa23.26■■□□□ 1.31
DDR1-263ENST00000508317 TNS1Q9HBL0 1735 aaKnown RBP23.26■■□□□ 1.31
DDR1-263ENST00000508317 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
DDR1-263ENST00000508317 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
DDR1-263ENST00000508317 KCNH5Q8NCM2 988 aa23.25■■□□□ 1.31
DDR1-263ENST00000508317 RGPD1P0DJD0 1748 aa23.23■■□□□ 1.31
DDR1-263ENST00000508317 EZH2Q15910 746 aaKnown RBP23.23■■□□□ 1.31
DDR1-263ENST00000508317 CARD11Q9BXL7 1154 aa23.23■■□□□ 1.31
DDR1-263ENST00000508317 USP6P35125 1406 aa23.23■■□□□ 1.31
DDR1-263ENST00000508317 TRIM37O94972 964 aa23.22■■□□□ 1.31
DDR1-263ENST00000508317 APBA3O96018 575 aa23.22■■□□□ 1.31
DDR1-263ENST00000508317 TONSLQ96HA7 1378 aa23.22■■□□□ 1.31
DDR1-263ENST00000508317 TOM1L2Q6ZVM7 507 aa23.21■■□□□ 1.31
DDR1-263ENST00000508317 TOPAZ1Q8N9V7 1692 aa23.21■■□□□ 1.31
DDR1-263ENST00000508317 TTC21AQ8NDW8 1320 aa23.2■■□□□ 1.3
DDR1-263ENST00000508317 CSB-PGBD3P0DP91 1061 aa23.2■■□□□ 1.3
DDR1-263ENST00000508317 YY1P25490 414 aa23.2■■□□□ 1.3
DDR1-263ENST00000508317 THSD7AQ9UPZ6 1657 aa23.19■■□□□ 1.3
DDR1-263ENST00000508317 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
DDR1-263ENST00000508317 PHRF1Q9P1Y6 1649 aaKnown RBP23.19■■□□□ 1.3
DDR1-263ENST00000508317 CAMKK2Q96RR4 588 aa23.18■■□□□ 1.3
DDR1-263ENST00000508317 AATKQ6ZMQ8 1374 aa23.17■■□□□ 1.3
DDR1-263ENST00000508317 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
DDR1-263ENST00000508317 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
DDR1-263ENST00000508317 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
DDR1-263ENST00000508317 TTC21BQ7Z4L5 1316 aa23.16■■□□□ 1.3
DDR1-263ENST00000508317 SOX12O15370 315 aa23.16■■□□□ 1.3
DDR1-263ENST00000508317 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
DDR1-263ENST00000508317 TMC1Q8TDI8 760 aa23.16■■□□□ 1.3
DDR1-263ENST00000508317 CDCA7Q9BWT1 371 aaPredicted RBP23.16■■□□□ 1.3
DDR1-263ENST00000508317 CRB1P82279 1406 aa23.16■■□□□ 1.3
DDR1-263ENST00000508317 KTN1Q86UP2 1357 aaKnown RBP23.15■■□□□ 1.3
DDR1-263ENST00000508317 NRKQ7Z2Y5 1582 aa23.15■■□□□ 1.3
DDR1-263ENST00000508317 CRYBG1Q9Y4K1 1723 aa23.14■■□□□ 1.3
DDR1-263ENST00000508317 DDB1Q16531 1140 aa23.14■■□□□ 1.29
DDR1-263ENST00000508317 CAMTA1Q9Y6Y1 1673 aa23.13■■□□□ 1.29
DDR1-263ENST00000508317 UTRNP46939 3433 aa23.13■■□□□ 1.29
DDR1-263ENST00000508317 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms