RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 USP17L8P0C7I0 530 aa11.34□□□□□ -0.59
DHFR-204ENST00000508282 SH3BP2P78314 561 aa11.34□□□□□ -0.59
DHFR-204ENST00000508282 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
DHFR-204ENST00000508282 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
DHFR-204ENST00000508282 WNT7AO00755 349 aa11.33□□□□□ -0.6
DHFR-204ENST00000508282 HMX1Q9NP08 348 aaPredicted RBP11.33□□□□□ -0.6
DHFR-204ENST00000508282 NRG2O14511 850 aaPredicted RBP11.32□□□□□ -0.6
DHFR-204ENST00000508282 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
DHFR-204ENST00000508282 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
DHFR-204ENST00000508282 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
DHFR-204ENST00000508282 NR6A1Q15406 480 aa11.3□□□□□ -0.6
DHFR-204ENST00000508282 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
DHFR-204ENST00000508282 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
DHFR-204ENST00000508282 BANK1Q8NDB2 785 aa11.27□□□□□ -0.61
DHFR-204ENST00000508282 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
DHFR-204ENST00000508282 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.61
DHFR-204ENST00000508282 FOXJ1Q92949 421 aa11.26□□□□□ -0.61
DHFR-204ENST00000508282 TRIM34Q9BYJ4 488 aa11.26□□□□□ -0.61
DHFR-204ENST00000508282 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
DHFR-204ENST00000508282 CYP4X1Q8N118 509 aa11.25□□□□□ -0.61
DHFR-204ENST00000508282 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
DHFR-204ENST00000508282 FKBPLQ9UIM3 349 aa11.25□□□□□ -0.61
DHFR-204ENST00000508282 SIAH2O43255 324 aa11.24□□□□□ -0.61
DHFR-204ENST00000508282 NBPF14Q5TI25 921 aa11.24□□□□□ -0.61
DHFR-204ENST00000508282 C4orf48Q5BLP8 95 aa11.23□□□□□ -0.61
DHFR-204ENST00000508282 MTMR14Q8NCE2 650 aa11.23□□□□□ -0.61
DHFR-204ENST00000508282 SNIP1Q8TAD8 396 aaKnown RBP11.23□□□□□ -0.61
DHFR-204ENST00000508282 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
DHFR-204ENST00000508282 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
DHFR-204ENST00000508282 Q6ZNB5 142 aa11.22□□□□□ -0.61
DHFR-204ENST00000508282 SH3BP5LQ7L8J4 393 aa11.22□□□□□ -0.61
DHFR-204ENST00000508282 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.61
DHFR-204ENST00000508282 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
DHFR-204ENST00000508282 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
DHFR-204ENST00000508282 BPHLQ86WA6 291 aaPredicted RBP11.21□□□□□ -0.61
DHFR-204ENST00000508282 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
DHFR-204ENST00000508282 FAM187AA6NFU0 413 aa11.2□□□□□ -0.62
DHFR-204ENST00000508282 J3QL48 77 aa11.2□□□□□ -0.62
DHFR-204ENST00000508282 AGERQ15109 404 aa11.2□□□□□ -0.62
DHFR-204ENST00000508282 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
DHFR-204ENST00000508282 SOCS7O14512 581 aa11.19□□□□□ -0.62
DHFR-204ENST00000508282 LCE2BO14633 110 aa11.19□□□□□ -0.62
DHFR-204ENST00000508282 DGAT1O75907 488 aa11.19□□□□□ -0.62
DHFR-204ENST00000508282 SMPD1P17405 629 aa11.19□□□□□ -0.62
DHFR-204ENST00000508282 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
DHFR-204ENST00000508282 PKDCCQ504Y2 493 aa11.18□□□□□ -0.62
DHFR-204ENST00000508282 TLL2Q9Y6L7 1015 aa11.18□□□□□ -0.62
DHFR-204ENST00000508282 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
DHFR-204ENST00000508282 FAM174AQ8TBP5 190 aa11.17□□□□□ -0.62
DHFR-204ENST00000508282 OCSTAMPQ9BR26 566 aa11.16□□□□□ -0.62
DHFR-204ENST00000508282 C1QTNF2Q9BXJ5 285 aa11.16□□□□□ -0.62
DHFR-204ENST00000508282 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
DHFR-204ENST00000508282 MPNDQ8N594 471 aa11.15□□□□□ -0.62
DHFR-204ENST00000508282 PNMA1Q8ND90 353 aa11.15□□□□□ -0.62
DHFR-204ENST00000508282 GPR37L1O60883 481 aa11.14□□□□□ -0.63
DHFR-204ENST00000508282 ARHGAP9Q9BRR9 750 aa11.14□□□□□ -0.63
DHFR-204ENST00000508282 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
DHFR-204ENST00000508282 MYT1Q01538 1121 aa11.13□□□□□ -0.63
DHFR-204ENST00000508282 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
DHFR-204ENST00000508282 GPSM3Q9Y4H4 160 aa11.13□□□□□ -0.63
DHFR-204ENST00000508282 AVPP01185 164 aa11.12□□□□□ -0.63
DHFR-204ENST00000508282 PTK2Q05397 1052 aa11.12□□□□□ -0.63
DHFR-204ENST00000508282 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
DHFR-204ENST00000508282 CDK15Q96Q40 435 aa11.12□□□□□ -0.63
DHFR-204ENST00000508282 MCM6Q14566 821 aa11.11□□□□□ -0.63
DHFR-204ENST00000508282 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
DHFR-204ENST00000508282 HPS1Q92902 700 aa11.11□□□□□ -0.63
DHFR-204ENST00000508282 NDUFB9Q9Y6M9 179 aa11.11□□□□□ -0.63
DHFR-204ENST00000508282 APBB1O00213 710 aa11.1□□□□□ -0.63
DHFR-204ENST00000508282 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
DHFR-204ENST00000508282 WASF2Q9Y6W5 498 aa11.1□□□□□ -0.63
DHFR-204ENST00000508282 ZBTB33Q86T24 672 aa11.09□□□□□ -0.63
DHFR-204ENST00000508282 ADAM32Q8TC27 787 aa11.09□□□□□ -0.63
DHFR-204ENST00000508282 ADH1CP00326 375 aa11.08□□□□□ -0.64
DHFR-204ENST00000508282 GRM5P41594 1212 aa11.08□□□□□ -0.64
DHFR-204ENST00000508282 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
DHFR-204ENST00000508282 ST8SIA5O15466 376 aa11.07□□□□□ -0.64
DHFR-204ENST00000508282 MAP4K5Q9Y4K4 846 aa11.07□□□□□ -0.64
DHFR-204ENST00000508282 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
DHFR-204ENST00000508282 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
DHFR-204ENST00000508282 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
DHFR-204ENST00000508282 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
DHFR-204ENST00000508282 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
DHFR-204ENST00000508282 NNTQ13423 1086 aa11.05□□□□□ -0.64
DHFR-204ENST00000508282 VASH1Q7L8A9 365 aaPredicted RBP11.05□□□□□ -0.64
DHFR-204ENST00000508282 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
DHFR-204ENST00000508282 SLC10A4Q96EP9 437 aa11.04□□□□□ -0.64
DHFR-204ENST00000508282 NR3C2P08235 984 aa11.03□□□□□ -0.64
DHFR-204ENST00000508282 NR5A1Q13285 461 aa11.03□□□□□ -0.64
DHFR-204ENST00000508282 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
DHFR-204ENST00000508282 AXIN1O15169 862 aa11.02□□□□□ -0.65
DHFR-204ENST00000508282 FSHRP23945 695 aa11.02□□□□□ -0.65
DHFR-204ENST00000508282 NR1H3Q13133 447 aa11.01□□□□□ -0.65
DHFR-204ENST00000508282 IRF5Q13568 498 aa11.01□□□□□ -0.65
DHFR-204ENST00000508282 PRM3Q9NNZ6 103 aa11.01□□□□□ -0.65
DHFR-204ENST00000508282 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
DHFR-204ENST00000508282 FLIIQ13045 1269 aa11□□□□□ -0.65
DHFR-204ENST00000508282 KCTD15Q96SI1 283 aaPredicted RBP11□□□□□ -0.65
DHFR-204ENST00000508282 KLF16Q9BXK1 252 aaPredicted RBP11□□□□□ -0.65
DHFR-204ENST00000508282 CDV3Q9UKY7 258 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms