RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 GJD4Q96KN9 370 aaPredicted RBP20.56■□□□□ 0.88
RAB28-205ENST00000508274 PAK3O75914 559 aaPredicted RBP20.55■□□□□ 0.88
RAB28-205ENST00000508274 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
RAB28-205ENST00000508274 NRAPQ86VF7 1730 aa20.54■□□□□ 0.88
RAB28-205ENST00000508274 POLR3AO14802 1390 aaPredicted RBP20.53■□□□□ 0.88
RAB28-205ENST00000508274 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
RAB28-205ENST00000508274 ACEP12821 1306 aa20.53■□□□□ 0.88
RAB28-205ENST00000508274 FAM83GA6ND36 823 aa20.52■□□□□ 0.88
RAB28-205ENST00000508274 PHRF1Q9P1Y6 1649 aaKnown RBP20.52■□□□□ 0.87
RAB28-205ENST00000508274 ROCK2O75116 1388 aaKnown RBP20.52■□□□□ 0.87
RAB28-205ENST00000508274 SRPK2P78362 688 aaKnown RBP20.51■□□□□ 0.87
RAB28-205ENST00000508274 CABP2Q9NPB3 220 aa20.51■□□□□ 0.87
RAB28-205ENST00000508274 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
RAB28-205ENST00000508274 BRWD3Q6RI45 1802 aa20.5■□□□□ 0.87
RAB28-205ENST00000508274 ATAD2Q6PL18 1390 aa20.5■□□□□ 0.87
RAB28-205ENST00000508274 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
RAB28-205ENST00000508274 PLEKHG3A1L390 1219 aa20.5■□□□□ 0.87
RAB28-205ENST00000508274 NBPF8Q3BBV2 869 aa20.5■□□□□ 0.87
RAB28-205ENST00000508274 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
RAB28-205ENST00000508274 NUTM2GQ5VZR2 741 aa20.48■□□□□ 0.87
RAB28-205ENST00000508274 VPS72Q15906 364 aa20.47■□□□□ 0.87
RAB28-205ENST00000508274 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
RAB28-205ENST00000508274 CCDC9Q9Y3X0 531 aaKnown RBP20.46■□□□□ 0.87
RAB28-205ENST00000508274 NRKQ7Z2Y5 1582 aa20.43■□□□□ 0.86
RAB28-205ENST00000508274 KIAA0232Q92628 1395 aa20.43■□□□□ 0.86
RAB28-205ENST00000508274 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
RAB28-205ENST00000508274 PRDM11Q9NQV5 511 aa20.42■□□□□ 0.86
RAB28-205ENST00000508274 EVC2Q86UK5 1308 aa20.42■□□□□ 0.86
RAB28-205ENST00000508274 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
RAB28-205ENST00000508274 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
RAB28-205ENST00000508274 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
RAB28-205ENST00000508274 MSH5O43196 834 aa20.4■□□□□ 0.86
RAB28-205ENST00000508274 ZC3H6P61129 1189 aaKnown RBP20.4■□□□□ 0.86
RAB28-205ENST00000508274 CHRNA2Q15822 529 aa20.4■□□□□ 0.86
RAB28-205ENST00000508274 USP6P35125 1406 aa20.39■□□□□ 0.85
RAB28-205ENST00000508274 ONECUT3O60422 494 aaPredicted RBP20.38■□□□□ 0.85
RAB28-205ENST00000508274 AKAP12Q02952 1782 aa20.38■□□□□ 0.85
RAB28-205ENST00000508274 USP19O94966 1318 aa20.37■□□□□ 0.85
RAB28-205ENST00000508274 FAM98CQ17RN3 349 aaKnown RBP20.37■□□□□ 0.85
RAB28-205ENST00000508274 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
RAB28-205ENST00000508274 PIK3C2AO00443 1686 aa20.37■□□□□ 0.85
RAB28-205ENST00000508274 SPATA31A5Q5VU36 1347 aa20.35■□□□□ 0.85
RAB28-205ENST00000508274 SPATA31A7Q8IWB4 1347 aa20.35■□□□□ 0.85
RAB28-205ENST00000508274 LMO7Q8WWI1 1683 aa20.35■□□□□ 0.85
RAB28-205ENST00000508274 A0A0G2JS52 829 aa20.35■□□□□ 0.85
RAB28-205ENST00000508274 MYT1Q01538 1121 aa20.35■□□□□ 0.85
RAB28-205ENST00000508274 SSH2Q76I76 1423 aa20.35■□□□□ 0.85
RAB28-205ENST00000508274 THSD7AQ9UPZ6 1657 aa20.33■□□□□ 0.85
RAB28-205ENST00000508274 CAMTA1Q9Y6Y1 1673 aa20.33■□□□□ 0.84
RAB28-205ENST00000508274 BRD4O60885 1362 aaPredicted RBP20.33■□□□□ 0.84
RAB28-205ENST00000508274 SBNO2Q9Y2G9 1366 aa20.33■□□□□ 0.84
RAB28-205ENST00000508274 NLRP13Q86W25 1043 aa20.33■□□□□ 0.84
RAB28-205ENST00000508274 STRN4Q9NRL3 753 aa20.33■□□□□ 0.84
RAB28-205ENST00000508274 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
RAB28-205ENST00000508274 CPDO75976 1380 aa20.31■□□□□ 0.84
RAB28-205ENST00000508274 SLIT3O75094 1523 aa20.31■□□□□ 0.84
RAB28-205ENST00000508274 GCP02774 474 aa20.31■□□□□ 0.84
RAB28-205ENST00000508274 NLRP6P59044 892 aa20.3■□□□□ 0.84
RAB28-205ENST00000508274 BLMP54132 1417 aaPredicted RBP20.3■□□□□ 0.84
RAB28-205ENST00000508274 SPATA31A1Q5TZJ5 1347 aa20.3■□□□□ 0.84
RAB28-205ENST00000508274 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
RAB28-205ENST00000508274 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
RAB28-205ENST00000508274 SRCAPQ6ZRS2 3230 aa20.29■□□□□ 0.84
RAB28-205ENST00000508274 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
RAB28-205ENST00000508274 FAM182BQ5T319 152 aa20.27■□□□□ 0.84
RAB28-205ENST00000508274 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.84
RAB28-205ENST00000508274 USP35Q9P2H5 1018 aa20.26■□□□□ 0.83
RAB28-205ENST00000508274 ZBTB7CA1YPR0 619 aa20.25■□□□□ 0.83
RAB28-205ENST00000508274 EVA1CP58658 441 aa20.25■□□□□ 0.83
RAB28-205ENST00000508274 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
RAB28-205ENST00000508274 DEFB132Q7Z7B7 95 aa20.25■□□□□ 0.83
RAB28-205ENST00000508274 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
RAB28-205ENST00000508274 KTN1Q86UP2 1357 aaKnown RBP20.25■□□□□ 0.83
RAB28-205ENST00000508274 COL5A2P05997 1499 aaPredicted RBP20.25■□□□□ 0.83
RAB28-205ENST00000508274 CD163L1Q9NR16 1453 aa20.25■□□□□ 0.83
RAB28-205ENST00000508274 COL18A1P39060 1754 aa20.25■□□□□ 0.83
RAB28-205ENST00000508274 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
RAB28-205ENST00000508274 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
RAB28-205ENST00000508274 SOX12O15370 315 aa20.21■□□□□ 0.83
RAB28-205ENST00000508274 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
RAB28-205ENST00000508274 RGPD1P0DJD0 1748 aa20.21■□□□□ 0.83
RAB28-205ENST00000508274 SF3B2Q13435 895 aaKnown RBP20.21■□□□□ 0.83
RAB28-205ENST00000508274 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
RAB28-205ENST00000508274 NFAT5O94916 1531 aa20.2■□□□□ 0.82
RAB28-205ENST00000508274 ST20-MTHFSA0A0A6YYL1 179 aa20.2■□□□□ 0.82
RAB28-205ENST00000508274 TESK2Q96S53 571 aa20.2■□□□□ 0.82
RAB28-205ENST00000508274 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
RAB28-205ENST00000508274 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
RAB28-205ENST00000508274 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
RAB28-205ENST00000508274 BARGINQ6ZT62 677 aa20.19■□□□□ 0.82
RAB28-205ENST00000508274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.19■□□□□ 0.823e-7■■■■□ 22.8
RAB28-205ENST00000508274 ZRANB1Q9UGI0 708 aa20.19■□□□□ 0.82
RAB28-205ENST00000508274 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
RAB28-205ENST00000508274 AXIN2Q9Y2T1 843 aa20.17■□□□□ 0.82
RAB28-205ENST00000508274 CRB1P82279 1406 aa20.17■□□□□ 0.82
RAB28-205ENST00000508274 PARP4Q9UKK3 1724 aaKnown RBP20.17■□□□□ 0.82
RAB28-205ENST00000508274 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
RAB28-205ENST00000508274 NME9Q86XW9 330 aa20.17■□□□□ 0.82
RAB28-205ENST00000508274 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
RAB28-205ENST00000508274 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 376.8 ms