RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 KANK1Q14678 1352 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 ZNF445P59923 1031 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
PDLIM5-210ENST00000508216 CCDC196A0A1B0GTZ2 297 aa13.19□□□□□ -0.3
PDLIM5-210ENST00000508216 ANKRD33BA6NCL7 494 aa13.19□□□□□ -0.3
PDLIM5-210ENST00000508216 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
PDLIM5-210ENST00000508216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 CHAF1AQ13111 956 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-210ENST00000508216 RIOK3O14730 519 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 CYP2C19P33261 490 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 HDAC1Q13547 482 aaPredicted RBP13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 MPNDQ8N594 471 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 CTNNA3Q9UI47 895 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 SUFUQ9UMX1 484 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 MAP3K13O43283 966 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 COQ9O75208 318 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 HSPA5P11021 654 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 SUGP1Q8IWZ8 645 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
PDLIM5-210ENST00000508216 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
PDLIM5-210ENST00000508216 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
PDLIM5-210ENST00000508216 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.32e-9■■■■■ 29.5
PDLIM5-210ENST00000508216 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-210ENST00000508216 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
PDLIM5-210ENST00000508216 GOLGA6L1Q8N7Z2 621 aa13.15□□□□□ -0.3
PDLIM5-210ENST00000508216 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
PDLIM5-210ENST00000508216 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
PDLIM5-210ENST00000508216 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-210ENST00000508216 ATP2B1P20020 1258 aa13.15□□□□□ -0.31
PDLIM5-210ENST00000508216 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.31
PDLIM5-210ENST00000508216 RINLQ6ZS11 566 aa13.15□□□□□ -0.31
PDLIM5-210ENST00000508216 TSPAN18Q96SJ8 248 aa13.15□□□□□ -0.31
PDLIM5-210ENST00000508216 SPTLC3Q9NUV7 552 aa13.15□□□□□ -0.31
PDLIM5-210ENST00000508216 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.31
PDLIM5-210ENST00000508216 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 INSRP06213 1382 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 DDIT3P35638 169 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 CLCN6P51797 869 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 RCAN3Q9UKA8 241 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 JRKLQ9Y4A0 524 aa13.14□□□□□ -0.31
PDLIM5-210ENST00000508216 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
PDLIM5-210ENST00000508216 UVSSAQ2YD98 709 aa13.12□□□□□ -0.31
PDLIM5-210ENST00000508216 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-210ENST00000508216 IPO7O95373 1038 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-210ENST00000508216 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
PDLIM5-210ENST00000508216 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
PDLIM5-210ENST00000508216 LRPPRCP42704 1394 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-210ENST00000508216 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-210ENST00000508216 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-210ENST00000508216 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-210ENST00000508216 A0A1B0GUL7 405 aa13.1□□□□□ -0.31
PDLIM5-210ENST00000508216 KLHL40Q2TBA0 621 aa13.1□□□□□ -0.31
PDLIM5-210ENST00000508216 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
PDLIM5-210ENST00000508216 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
PDLIM5-210ENST00000508216 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
PDLIM5-210ENST00000508216 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
PDLIM5-210ENST00000508216 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
PDLIM5-210ENST00000508216 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
PDLIM5-210ENST00000508216 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
PDLIM5-210ENST00000508216 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
PDLIM5-210ENST00000508216 YEATS2Q9ULM3 1422 aa13.09□□□□□ -0.31
PDLIM5-210ENST00000508216 NOL10Q9BSC4 688 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-210ENST00000508216 TSGA10IPQ3SY00 556 aa13.08□□□□□ -0.32
PDLIM5-210ENST00000508216 NUCKS1Q9H1E3 243 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-210ENST00000508216 RABEP1Q15276 862 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
PDLIM5-210ENST00000508216 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms