RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
PDE6A-202ENST00000508173 C8orf37Q96NL8 207 aa9.69□□□□□ -0.86
PDE6A-202ENST00000508173 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
PDE6A-202ENST00000508173 ADAMTS12P58397 1594 aa9.69□□□□□ -0.86
PDE6A-202ENST00000508173 SAFBQ15424 915 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDE6A-202ENST00000508173 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
PDE6A-202ENST00000508173 DNAI2Q9GZS0 605 aa9.69□□□□□ -0.86
PDE6A-202ENST00000508173 FAM135AQ9P2D6 1515 aa9.68□□□□□ -0.86
PDE6A-202ENST00000508173 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
PDE6A-202ENST00000508173 NCOA2Q15596 1464 aa9.68□□□□□ -0.86
PDE6A-202ENST00000508173 EPS15P42566 896 aa9.68□□□□□ -0.86
PDE6A-202ENST00000508173 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
PDE6A-202ENST00000508173 C11orf95C9JLR9 678 aaPredicted RBP9.68□□□□□ -0.86
PDE6A-202ENST00000508173 XBP1P17861 261 aa9.68□□□□□ -0.86
PDE6A-202ENST00000508173 RILPL2Q969X0 211 aa9.68□□□□□ -0.86
PDE6A-202ENST00000508173 EPRSP07814 1512 aaKnown RBP9.67□□□□□ -0.86
PDE6A-202ENST00000508173 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.67□□□□□ -0.86
PDE6A-202ENST00000508173 LRRC59Q96AG4 307 aaKnown RBP9.67□□□□□ -0.86
PDE6A-202ENST00000508173 PRXQ9BXM0 1461 aa9.67□□□□□ -0.86
PDE6A-202ENST00000508173 WDR7Q9Y4E6 1490 aa9.67□□□□□ -0.86
PDE6A-202ENST00000508173 MIA2Q96PC5 1412 aa9.67□□□□□ -0.86
PDE6A-202ENST00000508173 ST18O60284 1047 aa9.67□□□□□ -0.86
PDE6A-202ENST00000508173 MCTP1Q6DN14 999 aa9.67□□□□□ -0.86
PDE6A-202ENST00000508173 SKAP1Q86WV1 359 aa9.67□□□□□ -0.86
PDE6A-202ENST00000508173 CEBPAP49715 358 aaPredicted RBP9.67□□□□□ -0.86
PDE6A-202ENST00000508173 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
PDE6A-202ENST00000508173 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
PDE6A-202ENST00000508173 SLC26A8Q96RN1 970 aa9.66□□□□□ -0.86
PDE6A-202ENST00000508173 ZKSCAN1P17029 563 aaPredicted RBP9.66□□□□□ -0.86
PDE6A-202ENST00000508173 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
PDE6A-202ENST00000508173 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
PDE6A-202ENST00000508173 ATP2B2Q01814 1243 aa9.66□□□□□ -0.86
PDE6A-202ENST00000508173 IBSPP21815 317 aaPredicted RBP9.65□□□□□ -0.86
PDE6A-202ENST00000508173 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
PDE6A-202ENST00000508173 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 RPGRIP1LQ68CZ1 1315 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 PHF14O94880 888 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 MYCNP04198 464 aaPredicted RBP9.65□□□□□ -0.86
PDE6A-202ENST00000508173 HSP90AB4PQ58FF6 505 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.86
PDE6A-202ENST00000508173 ZSCAN29Q8IWY8 852 aaPredicted RBP9.65□□□□□ -0.86
PDE6A-202ENST00000508173 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
PDE6A-202ENST00000508173 CCDC184Q52MB2 194 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 PANK3Q9H999 370 aa9.65□□□□□ -0.86
PDE6A-202ENST00000508173 WASHC4Q2M389 1173 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 ANKRD45Q5TZF3 282 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 NEUROD6Q96NK8 337 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 STK32BQ9NY57 414 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 ANKRD50Q9ULJ7 1429 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 DESP17661 470 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 CHMP5Q9NZZ3 219 aa9.65□□□□□ -0.87
PDE6A-202ENST00000508173 C9orf84Q5VXU9 1444 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 NEBLO76041 1014 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 NLRP6P59044 892 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 CDCA7LQ96GN5 454 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 ATP6V1DQ9Y5K8 247 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 ST20-MTHFSA0A0A6YYL1 179 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 TRAK2O60296 914 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 RXRBP28702 533 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 UBE2Q2Q8WVN8 375 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 PLEKHO1Q53GL0 409 aaPredicted RBP9.64□□□□□ -0.87
PDE6A-202ENST00000508173 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 RRBP1Q9P2E9 1410 aaKnown RBP9.64□□□□□ -0.87
PDE6A-202ENST00000508173 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
PDE6A-202ENST00000508173 NASPP49321 788 aaPredicted RBP9.63□□□□□ -0.87
PDE6A-202ENST00000508173 AIMP1Q12904 312 aaKnown RBP9.63□□□□□ -0.87
PDE6A-202ENST00000508173 HSP90AB2PQ58FF8 381 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 CDK5RAP3Q96JB5 506 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 SUPT6HQ7KZ85 1726 aaKnown RBP9.63□□□□□ -0.87
PDE6A-202ENST00000508173 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 TNRQ92752 1358 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 MRE11P49959 708 aa9.63□□□□□ -0.87
PDE6A-202ENST00000508173 ZNF644Q9H582 1327 aaPredicted RBP9.62□□□□□ -0.87
PDE6A-202ENST00000508173 OFD1O75665 1012 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 SYCP1Q15431 976 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 NUTM2GQ5VZR2 741 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 MPNDQ8N594 471 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
PDE6A-202ENST00000508173 RNF214Q8ND24 703 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 PANK1Q8TE04 598 aa9.62□□□□□ -0.87
PDE6A-202ENST00000508173 GOLGA6L19H0YKK7 550 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 CABP4P57796 275 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
PDE6A-202ENST00000508173 SCLT1Q96NL6 688 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 CNNM1Q9NRU3 951 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 CCDC141Q6ZP82 1450 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 DIAPH1O60610 1272 aaKnown RBP9.61□□□□□ -0.87
PDE6A-202ENST00000508173 KRT18P05783 430 aaKnown RBP9.61□□□□□ -0.87
PDE6A-202ENST00000508173 TSPYL4Q9UJ04 414 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 FBXO41Q8TF61 875 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 BACH2Q9BYV9 841 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms