RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
CAST-220ENST00000508117 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
CAST-220ENST00000508117 PIK3C2GO75747 1445 aa13.8□□□□□ -0.2
CAST-220ENST00000508117 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
CAST-220ENST00000508117 SPATA31E1Q6ZUB1 1445 aa13.79□□□□□ -0.2
CAST-220ENST00000508117 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
CAST-220ENST00000508117 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
CAST-220ENST00000508117 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
CAST-220ENST00000508117 COL14A1Q05707 1796 aaKnown RBP13.77□□□□□ -0.21
CAST-220ENST00000508117 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
CAST-220ENST00000508117 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.21
CAST-220ENST00000508117 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
CAST-220ENST00000508117 R3HDM1Q15032 1099 aaKnown RBP13.76□□□□□ -0.21
CAST-220ENST00000508117 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 PARD3Q8TEW0 1356 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 A0A0G2JS52 829 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 MYT1Q01538 1121 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 TRPM3Q9HCF6 1732 aaPredicted RBP13.75□□□□□ -0.21
CAST-220ENST00000508117 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
CAST-220ENST00000508117 ALS2Q96Q42 1657 aa13.74□□□□□ -0.21
CAST-220ENST00000508117 RGL3Q3MIN7 710 aa13.73□□□□□ -0.21
CAST-220ENST00000508117 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
CAST-220ENST00000508117 C14orf93Q9H972 538 aaKnown RBP13.73□□□□□ -0.21
CAST-220ENST00000508117 CAMKK2Q96RR4 588 aa13.72□□□□□ -0.21
CAST-220ENST00000508117 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
CAST-220ENST00000508117 DLC1Q96QB1 1528 aa13.71□□□□□ -0.21
CAST-220ENST00000508117 EZH2Q15910 746 aaKnown RBP13.71□□□□□ -0.21
CAST-220ENST00000508117 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.21
CAST-220ENST00000508117 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
CAST-220ENST00000508117 YY1P25490 414 aa13.7□□□□□ -0.22
CAST-220ENST00000508117 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
CAST-220ENST00000508117 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
CAST-220ENST00000508117 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
CAST-220ENST00000508117 RREB1Q92766 1687 aa13.69□□□□□ -0.22
CAST-220ENST00000508117 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
CAST-220ENST00000508117 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
CAST-220ENST00000508117 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
CAST-220ENST00000508117 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
CAST-220ENST00000508117 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
CAST-220ENST00000508117 TRIM37O94972 964 aa13.66□□□□□ -0.22
CAST-220ENST00000508117 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
CAST-220ENST00000508117 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
CAST-220ENST00000508117 CFAP70Q5T0N1 1121 aa13.65□□□□□ -0.22
CAST-220ENST00000508117 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
CAST-220ENST00000508117 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 APBA3O96018 575 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 NBPF8Q3BBV2 869 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 NBPF14Q5TI25 921 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
CAST-220ENST00000508117 MPHOSPH9Q99550 1183 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 POGKQ9P215 609 aa13.64□□□□□ -0.23
CAST-220ENST00000508117 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
CAST-220ENST00000508117 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
CAST-220ENST00000508117 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
CAST-220ENST00000508117 SPON1Q9HCB6 807 aa13.62□□□□□ -0.23
CAST-220ENST00000508117 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
CAST-220ENST00000508117 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
CAST-220ENST00000508117 C11orf95C9JLR9 678 aaPredicted RBP13.6□□□□□ -0.23
CAST-220ENST00000508117 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
CAST-220ENST00000508117 KCNQ2O43526 872 aa13.6□□□□□ -0.23
CAST-220ENST00000508117 PHRF1Q9P1Y6 1649 aaKnown RBP13.6□□□□□ -0.23
CAST-220ENST00000508117 ATP7BP35670 1465 aa13.6□□□□□ -0.23
CAST-220ENST00000508117 ITSN1Q15811 1721 aa13.59□□□□□ -0.23
CAST-220ENST00000508117 RGPD3A6NKT7 1758 aaPredicted RBP13.59□□□□□ -0.23
CAST-220ENST00000508117 RGPD4Q7Z3J3 1758 aa13.59□□□□□ -0.23
CAST-220ENST00000508117 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
CAST-220ENST00000508117 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
CAST-220ENST00000508117 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
CAST-220ENST00000508117 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
CAST-220ENST00000508117 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
CAST-220ENST00000508117 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
CAST-220ENST00000508117 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
CAST-220ENST00000508117 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
CAST-220ENST00000508117 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
CAST-220ENST00000508117 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
CAST-220ENST00000508117 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
CAST-220ENST00000508117 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
CAST-220ENST00000508117 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
CAST-220ENST00000508117 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
CAST-220ENST00000508117 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
CAST-220ENST00000508117 CPDO75976 1380 aa13.56□□□□□ -0.24
CAST-220ENST00000508117 EVA1CP58658 441 aa13.55□□□□□ -0.24
CAST-220ENST00000508117 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
CAST-220ENST00000508117 LMO7Q8WWI1 1683 aa13.55□□□□□ -0.24
CAST-220ENST00000508117 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
CAST-220ENST00000508117 PLSCR1O15162 318 aa13.54□□□□□ -0.24
CAST-220ENST00000508117 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
CAST-220ENST00000508117 USP35Q9P2H5 1018 aa13.54□□□□□ -0.24
CAST-220ENST00000508117 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
CAST-220ENST00000508117 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
CAST-220ENST00000508117 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
CAST-220ENST00000508117 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
CAST-220ENST00000508117 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
CAST-220ENST00000508117 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
CAST-220ENST00000508117 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms