RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 CABLES1Q8TDN4 633 aa39.37■■■■□ 3.89
MSX2-202ENST00000507785 SLC24A1O60721 1099 aa39.36■■■■□ 3.89
MSX2-202ENST00000507785 AFF2P51816 1311 aa39.36■■■■□ 3.89
MSX2-202ENST00000507785 USP6P35125 1406 aa39.35■■■■□ 3.89
MSX2-202ENST00000507785 BRD4O60885 1362 aaPredicted RBP39.33■■■■□ 3.89
MSX2-202ENST00000507785 ZNF772Q68DY9 489 aaPredicted RBP39.32■■■■□ 3.89
MSX2-202ENST00000507785 CPSF1Q10570 1443 aaKnown RBP39.31■■■■□ 3.88
MSX2-202ENST00000507785 SSH2Q76I76 1423 aa39.31■■■■□ 3.88
MSX2-202ENST00000507785 NGLY1Q96IV0 654 aa39.31■■■■□ 3.88
MSX2-202ENST00000507785 PLEKHG5O94827 1062 aa39.28■■■■□ 3.88
MSX2-202ENST00000507785 MON2Q7Z3U7 1717 aa39.27■■■■□ 3.88
MSX2-202ENST00000507785 FNBP4Q8N3X1 1017 aaPredicted RBP39.27■■■■□ 3.88
MSX2-202ENST00000507785 ZNF692Q9BU19 519 aaPredicted RBP39.27■■■■□ 3.88
MSX2-202ENST00000507785 CD163L1Q9NR16 1453 aa39.27■■■■□ 3.88
MSX2-202ENST00000507785 NRKQ7Z2Y5 1582 aa39.25■■■■□ 3.87
MSX2-202ENST00000507785 TMF1P82094 1093 aa39.25■■■■□ 3.87
MSX2-202ENST00000507785 PHRF1Q9P1Y6 1649 aaKnown RBP39.25■■■■□ 3.87
MSX2-202ENST00000507785 HAP1P54257 671 aaPredicted RBP39.24■■■■□ 3.87
MSX2-202ENST00000507785 ABTB2Q8N961 1025 aa39.22■■■■□ 3.87
MSX2-202ENST00000507785 SLC12A5Q9H2X9 1139 aa39.22■■■■□ 3.87
MSX2-202ENST00000507785 TMC1Q8TDI8 760 aa39.21■■■■□ 3.87
MSX2-202ENST00000507785 PIK3C2AO00443 1686 aa39.2■■■■□ 3.87
MSX2-202ENST00000507785 NUTM2GQ5VZR2 741 aa39.2■■■■□ 3.87
MSX2-202ENST00000507785 KTN1Q86UP2 1357 aaKnown RBP39.19■■■■□ 3.86
MSX2-202ENST00000507785 NINLQ9Y2I6 1382 aa39.19■■■■□ 3.86
MSX2-202ENST00000507785 SLIT2O94813 1529 aa39.19■■■■□ 3.86
MSX2-202ENST00000507785 EIF4G2P78344 907 aaKnown RBP eCLIP39.18■■■■□ 3.86
MSX2-202ENST00000507785 BCL9LQ86UU0 1499 aa39.17■■■■□ 3.86
MSX2-202ENST00000507785 USP19O94966 1318 aa39.17■■■■□ 3.86
MSX2-202ENST00000507785 TTC21BQ7Z4L5 1316 aa39.17■■■■□ 3.86
MSX2-202ENST00000507785 USP21Q9UK80 565 aa39.17■■■■□ 3.86
MSX2-202ENST00000507785 PLCH1Q4KWH8 1693 aa39.16■■■■□ 3.86
MSX2-202ENST00000507785 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.16■■■■□ 3.86
MSX2-202ENST00000507785 HSPA5P11021 654 aaKnown RBP39.15■■■■□ 3.86
MSX2-202ENST00000507785 NWD2Q9ULI1 1742 aa39.14■■■■□ 3.86
MSX2-202ENST00000507785 A0A1W2PP64 1363 aa39.13■■■■□ 3.85
MSX2-202ENST00000507785 TTC21AQ8NDW8 1320 aa39.13■■■■□ 3.85
MSX2-202ENST00000507785 FAM83GA6ND36 823 aa39.12■■■■□ 3.85
MSX2-202ENST00000507785 NLRP13Q86W25 1043 aa39.12■■■■□ 3.85
MSX2-202ENST00000507785 QTRT2Q9H974 415 aaKnown RBP39.12■■■■□ 3.85
MSX2-202ENST00000507785 CDCA8Q53HL2 280 aa39.11■■■■□ 3.85
MSX2-202ENST00000507785 HDGFL2Q7Z4V5 671 aaPredicted RBP39.11■■■■□ 3.85
MSX2-202ENST00000507785 COL14A1Q05707 1796 aaKnown RBP39.1■■■■□ 3.85
MSX2-202ENST00000507785 ATRNO75882 1429 aa39.1■■■■□ 3.85
MSX2-202ENST00000507785 TERF2IPQ9NYB0 399 aa39.1■■■■□ 3.85
MSX2-202ENST00000507785 SLIT3O75094 1523 aa39.09■■■■□ 3.85
MSX2-202ENST00000507785 NLRP6P59044 892 aa39.07■■■■□ 3.85
MSX2-202ENST00000507785 TRPC5Q9UL62 973 aaPredicted RBP39.07■■■■□ 3.85
MSX2-202ENST00000507785 MYOM1P52179 1685 aa39.06■■■■□ 3.84
MSX2-202ENST00000507785 EDC4Q6P2E9 1401 aaKnown RBP39.06■■■■□ 3.84
MSX2-202ENST00000507785 RXRBP28702 533 aa39.06■■■■□ 3.84
MSX2-202ENST00000507785 UNC5CLQ8IV45 518 aa39.05■■■■□ 3.84
MSX2-202ENST00000507785 NRAPQ86VF7 1730 aa39.05■■■■□ 3.84
MSX2-202ENST00000507785 KIAA0232Q92628 1395 aa39.05■■■■□ 3.84
MSX2-202ENST00000507785 USP54Q70EL1 1684 aa39.03■■■■□ 3.84
MSX2-202ENST00000507785 ANKRD36BQ8N2N9 1353 aa39.03■■■■□ 3.84
MSX2-202ENST00000507785 GCP02774 474 aa39.02■■■■□ 3.84
MSX2-202ENST00000507785 RBM6P78332 1123 aaKnown RBP39.02■■■■□ 3.84
MSX2-202ENST00000507785 CDK12Q9NYV4 1490 aaPredicted RBP39.01■■■■□ 3.84
MSX2-202ENST00000507785 ZC3H6P61129 1189 aaKnown RBP39.01■■■■□ 3.84
MSX2-202ENST00000507785 PRDM11Q9NQV5 511 aa39.01■■■■□ 3.84
MSX2-202ENST00000507785 CPDO75976 1380 aa39■■■■□ 3.83
MSX2-202ENST00000507785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39■■■■□ 3.83
MSX2-202ENST00000507785 USP31Q70CQ4 1352 aa38.99■■■■□ 3.83
MSX2-202ENST00000507785 SOCS7O14512 581 aa38.98■■■■□ 3.83
MSX2-202ENST00000507785 NME9Q86XW9 330 aa38.96■■■■□ 3.83
MSX2-202ENST00000507785 BTG4Q9NY30 223 aa38.96■■■■□ 3.83
MSX2-202ENST00000507785 CHRNA2Q15822 529 aa38.95■■■■□ 3.83
MSX2-202ENST00000507785 ZRANB1Q9UGI0 708 aa38.95■■■■□ 3.83
MSX2-202ENST00000507785 LMO7Q8WWI1 1683 aa38.94■■■■□ 3.82
MSX2-202ENST00000507785 GLI3P10071 1580 aa38.92■■■■□ 3.82
MSX2-202ENST00000507785 VPS72Q15906 364 aa38.92■■■■□ 3.82
MSX2-202ENST00000507785 GJD4Q96KN9 370 aaPredicted RBP38.92■■■■□ 3.82
MSX2-202ENST00000507785 RGS12O14924 1447 aa38.91■■■■□ 3.82
MSX2-202ENST00000507785 NFAT5O94916 1531 aa38.9■■■■□ 3.82
MSX2-202ENST00000507785 OVOS2A0A0J9YW53 1432 aa38.89■■■■□ 3.82
MSX2-202ENST00000507785 OVOS2Q6IE36 1432 aa38.89■■■■□ 3.82
MSX2-202ENST00000507785 KCNH5Q8NCM2 988 aa38.88■■■■□ 3.81
MSX2-202ENST00000507785 CAMTA1Q9Y6Y1 1673 aa38.87■■■■□ 3.81
MSX2-202ENST00000507785 COL18A1P39060 1754 aa38.87■■■■□ 3.81
MSX2-202ENST00000507785 C11orf95C9JLR9 678 aaPredicted RBP38.86■■■■□ 3.81
MSX2-202ENST00000507785 AATKQ6ZMQ8 1374 aa38.82■■■■□ 3.81
MSX2-202ENST00000507785 ARHGEF25Q86VW2 580 aa38.82■■■■□ 3.8
MSX2-202ENST00000507785 CARD14Q9BXL6 1004 aa38.82■■■■□ 3.8
MSX2-202ENST00000507785 POLR3GLQ9BT43 218 aa38.81■■■■□ 3.8
MSX2-202ENST00000507785 SOX12O15370 315 aa38.79■■■■□ 3.8
MSX2-202ENST00000507785 KIF20BQ96Q89 1820 aa38.79■■■■□ 3.8
MSX2-202ENST00000507785 CCDC9Q9Y3X0 531 aaKnown RBP38.77■■■■□ 3.8
MSX2-202ENST00000507785 SPATA31A5Q5VU36 1347 aa38.76■■■■□ 3.8
MSX2-202ENST00000507785 SPATA31A7Q8IWB4 1347 aa38.76■■■■□ 3.8
MSX2-202ENST00000507785 NSD3Q9BZ95 1437 aa38.76■■■■□ 3.8
MSX2-202ENST00000507785 COL5A2P05997 1499 aaPredicted RBP38.75■■■■□ 3.79
MSX2-202ENST00000507785 ZBTB7CA1YPR0 619 aa38.75■■■■□ 3.79
MSX2-202ENST00000507785 FYB1O15117 783 aa38.75■■■■□ 3.79
MSX2-202ENST00000507785 LTN1O94822 1766 aa38.75■■■■□ 3.79
MSX2-202ENST00000507785 RGPD5Q99666 1765 aa38.75■■■■□ 3.79
MSX2-202ENST00000507785 STRN4Q9NRL3 753 aa38.74■■■■□ 3.79
MSX2-202ENST00000507785 ABCC6O95255 1503 aa38.73■■■■□ 3.79
MSX2-202ENST00000507785 ONECUT3O60422 494 aaPredicted RBP38.72■■■■□ 3.79
MSX2-202ENST00000507785 COG3Q96JB2 828 aa38.72■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms