RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 TUSC1Q2TAM9 212 aa11.85□□□□□ -0.51
LINC01088-203ENST00000507476 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
LINC01088-203ENST00000507476 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
LINC01088-203ENST00000507476 LILRB3O75022 631 aa11.83□□□□□ -0.52
LINC01088-203ENST00000507476 LCE2AQ5TA79 106 aaPredicted RBP11.83□□□□□ -0.52
LINC01088-203ENST00000507476 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
LINC01088-203ENST00000507476 SNRPBP14678 240 aaKnown RBP11.82□□□□□ -0.52
LINC01088-203ENST00000507476 TREML4Q6UXN2 200 aa11.82□□□□□ -0.52
LINC01088-203ENST00000507476 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
LINC01088-203ENST00000507476 VARSP26640 1264 aaKnown RBP11.8□□□□□ -0.52
LINC01088-203ENST00000507476 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
LINC01088-203ENST00000507476 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-203ENST00000507476 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-203ENST00000507476 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-203ENST00000507476 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-203ENST00000507476 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-203ENST00000507476 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
LINC01088-203ENST00000507476 MPNDQ8N594 471 aa11.78□□□□□ -0.52
LINC01088-203ENST00000507476 TSC1Q92574 1164 aa11.78□□□□□ -0.52
LINC01088-203ENST00000507476 FOXJ1Q92949 421 aa11.78□□□□□ -0.52
LINC01088-203ENST00000507476 SENP2Q9HC62 589 aa11.78□□□□□ -0.52
LINC01088-203ENST00000507476 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
LINC01088-203ENST00000507476 CAPN5O15484 640 aaPredicted RBP11.76□□□□□ -0.53
LINC01088-203ENST00000507476 BMP1P13497 986 aa11.75□□□□□ -0.53
LINC01088-203ENST00000507476 TRIM46Q7Z4K8 759 aa11.75□□□□□ -0.53
LINC01088-203ENST00000507476 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
LINC01088-203ENST00000507476 C4orf48Q5BLP8 95 aa11.74□□□□□ -0.53
LINC01088-203ENST00000507476 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
LINC01088-203ENST00000507476 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
LINC01088-203ENST00000507476 NNTQ13423 1086 aa11.73□□□□□ -0.53
LINC01088-203ENST00000507476 FAM174AQ8TBP5 190 aa11.73□□□□□ -0.53
LINC01088-203ENST00000507476 KIFC2Q96AC6 838 aa11.73□□□□□ -0.53
LINC01088-203ENST00000507476 WFS1O76024 890 aa11.72□□□□□ -0.53
LINC01088-203ENST00000507476 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
LINC01088-203ENST00000507476 HELBQ8NG08 1087 aaPredicted RBP11.71□□□□□ -0.53
LINC01088-203ENST00000507476 BCANQ96GW7 911 aa11.71□□□□□ -0.53
LINC01088-203ENST00000507476 CDK15Q96Q40 435 aa11.71□□□□□ -0.53
LINC01088-203ENST00000507476 FBXO31Q5XUX0 539 aaPredicted RBP11.7□□□□□ -0.54
LINC01088-203ENST00000507476 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
LINC01088-203ENST00000507476 ADH1CP00326 375 aa11.69□□□□□ -0.54
LINC01088-203ENST00000507476 TIMP2P16035 220 aa11.68□□□□□ -0.54
LINC01088-203ENST00000507476 AGERQ15109 404 aa11.68□□□□□ -0.54
LINC01088-203ENST00000507476 LCE2CQ5TA81 110 aa11.68□□□□□ -0.54
LINC01088-203ENST00000507476 BPHLQ86WA6 291 aaPredicted RBP11.68□□□□□ -0.54
LINC01088-203ENST00000507476 KLF16Q9BXK1 252 aaPredicted RBP11.68□□□□□ -0.54
LINC01088-203ENST00000507476 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
LINC01088-203ENST00000507476 ARID5BQ14865 1188 aa11.67□□□□□ -0.54
LINC01088-203ENST00000507476 TERTO14746 1132 aaKnown RBP11.66□□□□□ -0.54
LINC01088-203ENST00000507476 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
LINC01088-203ENST00000507476 CTDSPL2Q05D32 466 aa11.66□□□□□ -0.54
LINC01088-203ENST00000507476 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
LINC01088-203ENST00000507476 SH3RF1Q7Z6J0 888 aa11.66□□□□□ -0.54
LINC01088-203ENST00000507476 ARMC2Q8NEN0 867 aa11.66□□□□□ -0.54
LINC01088-203ENST00000507476 C1QTNF2Q9BXJ5 285 aa11.66□□□□□ -0.54
LINC01088-203ENST00000507476 GRM5P41594 1212 aa11.65□□□□□ -0.54
LINC01088-203ENST00000507476 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
LINC01088-203ENST00000507476 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.54
LINC01088-203ENST00000507476 NR3C2P08235 984 aa11.64□□□□□ -0.55
LINC01088-203ENST00000507476 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
LINC01088-203ENST00000507476 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
LINC01088-203ENST00000507476 NBPF14Q5TI25 921 aa11.63□□□□□ -0.55
LINC01088-203ENST00000507476 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC01088-203ENST00000507476 NR5A1Q13285 461 aa11.62□□□□□ -0.55
LINC01088-203ENST00000507476 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
LINC01088-203ENST00000507476 DDRGK1Q96HY6 314 aa11.62□□□□□ -0.55
LINC01088-203ENST00000507476 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
LINC01088-203ENST00000507476 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
LINC01088-203ENST00000507476 LRRN4Q8WUT4 740 aa11.61□□□□□ -0.55
LINC01088-203ENST00000507476 PPP2R2DQ66LE6 453 aa11.6□□□□□ -0.55
LINC01088-203ENST00000507476 ITPKCQ96DU7 683 aa11.6□□□□□ -0.55
LINC01088-203ENST00000507476 ZIC2O95409 532 aaPredicted RBP11.59□□□□□ -0.55
LINC01088-203ENST00000507476 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
LINC01088-203ENST00000507476 MAGEB6P1A0A0J9YX57 407 aa11.58□□□□□ -0.56
LINC01088-203ENST00000507476 WIPF1O43516 503 aa11.58□□□□□ -0.56
LINC01088-203ENST00000507476 PURBQ96QR8 312 aaKnown RBP11.58□□□□□ -0.56
LINC01088-203ENST00000507476 GPKOWQ92917 476 aaPredicted RBP eCLIP11.57□□□□□ -0.56
LINC01088-203ENST00000507476 NXF1Q9UBU9 619 aaKnown RBP11.57□□□□□ -0.56
LINC01088-203ENST00000507476 MAP4K5Q9Y4K4 846 aa11.57□□□□□ -0.56
LINC01088-203ENST00000507476 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
LINC01088-203ENST00000507476 FSHRP23945 695 aa11.55□□□□□ -0.56
LINC01088-203ENST00000507476 SCARF1Q14162 830 aa11.55□□□□□ -0.56
LINC01088-203ENST00000507476 ERFEQ4G0M1 354 aa11.55□□□□□ -0.56
LINC01088-203ENST00000507476 VASH1Q7L8A9 365 aaPredicted RBP11.55□□□□□ -0.56
LINC01088-203ENST00000507476 FKBPLQ9UIM3 349 aa11.55□□□□□ -0.56
LINC01088-203ENST00000507476 NR6A1Q15406 480 aa11.54□□□□□ -0.56
LINC01088-203ENST00000507476 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
LINC01088-203ENST00000507476 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
LINC01088-203ENST00000507476 SOBPA7XYQ1 873 aa11.52□□□□□ -0.57
LINC01088-203ENST00000507476 AP1G2O75843 785 aa11.52□□□□□ -0.57
LINC01088-203ENST00000507476 VEGFBP49765 207 aa11.52□□□□□ -0.57
LINC01088-203ENST00000507476 MEIOBQ8N635 442 aa11.51□□□□□ -0.57
LINC01088-203ENST00000507476 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
LINC01088-203ENST00000507476 C6orf118Q5T5N4 469 aa11.5□□□□□ -0.57
LINC01088-203ENST00000507476 NPAS3Q8IXF0 933 aa11.5□□□□□ -0.57
LINC01088-203ENST00000507476 SLC16A10Q8TF71 515 aa11.5□□□□□ -0.57
LINC01088-203ENST00000507476 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
LINC01088-203ENST00000507476 H3BM21 787 aa11.49□□□□□ -0.57
LINC01088-203ENST00000507476 EPS8L1Q8TE68 723 aa11.49□□□□□ -0.57
LINC01088-203ENST00000507476 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
LINC01088-203ENST00000507476 CCDC116Q8IYX3 515 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms