RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 RGPD8O14715 1765 aaPredicted RBP10.37□□□□□ -0.75
SMAD1-206ENST00000507367 FYB1O15117 783 aa10.37□□□□□ -0.75
SMAD1-206ENST00000507367 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
SMAD1-206ENST00000507367 XIRP1Q702N8 1843 aaKnown RBP10.36□□□□□ -0.75
SMAD1-206ENST00000507367 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
SMAD1-206ENST00000507367 PHF23Q9BUL5 403 aaPredicted RBP10.36□□□□□ -0.75
SMAD1-206ENST00000507367 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
SMAD1-206ENST00000507367 SLAIN2Q9P270 581 aa10.36□□□□□ -0.75
SMAD1-206ENST00000507367 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
SMAD1-206ENST00000507367 PPP2R1AP30153 589 aa10.35□□□□□ -0.75
SMAD1-206ENST00000507367 CFAP53Q96M91 514 aa10.35□□□□□ -0.75
SMAD1-206ENST00000507367 ORAI2Q96SN7 254 aa10.35□□□□□ -0.75
SMAD1-206ENST00000507367 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
SMAD1-206ENST00000507367 NRKQ7Z2Y5 1582 aa10.35□□□□□ -0.75
SMAD1-206ENST00000507367 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
SMAD1-206ENST00000507367 FOXO3O43524 673 aa10.34□□□□□ -0.75
SMAD1-206ENST00000507367 TNNT2P45379 298 aaPredicted RBP10.34□□□□□ -0.75
SMAD1-206ENST00000507367 NME9Q86XW9 330 aa10.34□□□□□ -0.75
SMAD1-206ENST00000507367 ABTB2Q8N961 1025 aa10.34□□□□□ -0.75
SMAD1-206ENST00000507367 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
SMAD1-206ENST00000507367 KRT28Q7Z3Y7 464 aa10.33□□□□□ -0.76
SMAD1-206ENST00000507367 USP31Q70CQ4 1352 aa10.32□□□□□ -0.76
SMAD1-206ENST00000507367 TOM1O60784 492 aa10.32□□□□□ -0.76
SMAD1-206ENST00000507367 NLRP6P59044 892 aa10.32□□□□□ -0.76
SMAD1-206ENST00000507367 WDR43Q15061 677 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMAD1-206ENST00000507367 IQSEC2Q5JU85 1478 aa10.31□□□□□ -0.76
SMAD1-206ENST00000507367 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
SMAD1-206ENST00000507367 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
SMAD1-206ENST00000507367 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
SMAD1-206ENST00000507367 ARHGEF10O15013 1369 aa10.3□□□□□ -0.76
SMAD1-206ENST00000507367 AATKQ6ZMQ8 1374 aa10.3□□□□□ -0.76
SMAD1-206ENST00000507367 FAM9BQ8IZU0 186 aa10.3□□□□□ -0.76
SMAD1-206ENST00000507367 KCNH5Q8NCM2 988 aa10.3□□□□□ -0.76
SMAD1-206ENST00000507367 OVOS2A0A0J9YW53 1432 aa10.3□□□□□ -0.76
SMAD1-206ENST00000507367 OVOS2Q6IE36 1432 aa10.3□□□□□ -0.76
SMAD1-206ENST00000507367 MTHFSP49914 203 aa10.29□□□□□ -0.76
SMAD1-206ENST00000507367 NUDCQ9Y266 331 aa10.29□□□□□ -0.76
SMAD1-206ENST00000507367 PIK3C2AO00443 1686 aa10.28□□□□□ -0.76
SMAD1-206ENST00000507367 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
SMAD1-206ENST00000507367 PPM1GO15355 546 aaPredicted RBP10.28□□□□□ -0.76
SMAD1-206ENST00000507367 XPCQ01831 940 aaPredicted RBP10.28□□□□□ -0.76
SMAD1-206ENST00000507367 YTHDC1Q96MU7 727 aaKnown RBP10.28□□□□□ -0.76
SMAD1-206ENST00000507367 PNISRQ8TF01 805 aaKnown RBP10.27□□□□□ -0.77
SMAD1-206ENST00000507367 ZRANB1Q9UGI0 708 aa10.27□□□□□ -0.77
SMAD1-206ENST00000507367 PXDNQ92626 1479 aa10.27□□□□□ -0.77
SMAD1-206ENST00000507367 USP54Q70EL1 1684 aa10.27□□□□□ -0.77
SMAD1-206ENST00000507367 TRPM3Q9HCF6 1732 aaPredicted RBP10.27□□□□□ -0.77
SMAD1-206ENST00000507367 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 UBAP1LF5GYI3 381 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 SOX12O15370 315 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 CCDC184Q52MB2 194 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 NUTM2GQ5VZR2 741 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
SMAD1-206ENST00000507367 SPATA31A3Q5VYP0 1347 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 INSRP06213 1382 aa10.26□□□□□ -0.77
SMAD1-206ENST00000507367 SMG6Q86US8 1419 aaKnown RBP10.25□□□□□ -0.77
SMAD1-206ENST00000507367 CDK12Q9NYV4 1490 aaPredicted RBP10.25□□□□□ -0.77
SMAD1-206ENST00000507367 DIAPH1O60610 1272 aaKnown RBP10.25□□□□□ -0.77
SMAD1-206ENST00000507367 AMPHP49418 695 aa10.25□□□□□ -0.77
SMAD1-206ENST00000507367 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
SMAD1-206ENST00000507367 PNNQ9H307 717 aaKnown RBP10.25□□□□□ -0.77
SMAD1-206ENST00000507367 POLKQ9UBT6 870 aa10.25□□□□□ -0.77
SMAD1-206ENST00000507367 NHSL1Q5SYE7 1610 aa10.25□□□□□ -0.77
SMAD1-206ENST00000507367 FLT4P35916 1363 aa10.25□□□□□ -0.77
SMAD1-206ENST00000507367 ROBO1Q9Y6N7 1651 aa10.25□□□□□ -0.77
SMAD1-206ENST00000507367 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
SMAD1-206ENST00000507367 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
SMAD1-206ENST00000507367 RRS1Q15050 365 aaKnown RBP10.24□□□□□ -0.77
SMAD1-206ENST00000507367 DDX17Q92841 729 aaKnown RBP10.24□□□□□ -0.77
SMAD1-206ENST00000507367 LRRC59Q96AG4 307 aaKnown RBP10.24□□□□□ -0.77
SMAD1-206ENST00000507367 USP19O94966 1318 aa10.24□□□□□ -0.77
SMAD1-206ENST00000507367 ALS2Q96Q42 1657 aa10.24□□□□□ -0.77
SMAD1-206ENST00000507367 RTL1A6NKG5 1358 aa10.24□□□□□ -0.77
SMAD1-206ENST00000507367 AHDC1Q5TGY3 1603 aaPredicted RBP10.23□□□□□ -0.77
SMAD1-206ENST00000507367 NEFMP07197 916 aa10.23□□□□□ -0.77
SMAD1-206ENST00000507367 PIP4K2BP78356 416 aa10.23□□□□□ -0.77
SMAD1-206ENST00000507367 EMILIN1Q9Y6C2 1016 aa10.23□□□□□ -0.77
SMAD1-206ENST00000507367 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
SMAD1-206ENST00000507367 PNPLA6Q8IY17 1366 aa10.23□□□□□ -0.77
SMAD1-206ENST00000507367 SLIT3O75094 1523 aa10.23□□□□□ -0.77
SMAD1-206ENST00000507367 U2SURPO15042 1029 aaKnown RBP10.22□□□□□ -0.77
SMAD1-206ENST00000507367 GCP02774 474 aa10.22□□□□□ -0.77
SMAD1-206ENST00000507367 U2AF1L5P0DN76 240 aaPredicted RBP10.22□□□□□ -0.77
SMAD1-206ENST00000507367 HNRNPUQ00839 825 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMAD1-206ENST00000507367 U2AF1Q01081 240 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMAD1-206ENST00000507367 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
SMAD1-206ENST00000507367 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
SMAD1-206ENST00000507367 ADAMTS8Q9UP79 889 aa10.21□□□□□ -0.77
SMAD1-206ENST00000507367 MED1Q15648 1581 aaPredicted RBP10.21□□□□□ -0.78
SMAD1-206ENST00000507367 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
SMAD1-206ENST00000507367 NFAT5O94916 1531 aa10.2□□□□□ -0.78
SMAD1-206ENST00000507367 PHLPP1O60346 1717 aa10.19□□□□□ -0.78
SMAD1-206ENST00000507367 MARF1Q9Y4F3 1742 aaKnown RBP10.19□□□□□ -0.78
SMAD1-206ENST00000507367 COL3A1P02461 1466 aaPredicted RBP10.19□□□□□ -0.78
SMAD1-206ENST00000507367 MAPK8IP3Q9UPT6 1336 aa10.19□□□□□ -0.78
SMAD1-206ENST00000507367 FBLN1P23142 703 aa10.19□□□□□ -0.78
SMAD1-206ENST00000507367 HOXC9P31274 260 aa10.19□□□□□ -0.78
SMAD1-206ENST00000507367 ARHGEF25Q86VW2 580 aa10.19□□□□□ -0.78
SMAD1-206ENST00000507367 NGEFQ8N5V2 710 aa10.19□□□□□ -0.78
SMAD1-206ENST00000507367 IP6K1Q92551 441 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms