RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 XPCQ01831 940 aaPredicted RBP19.47■□□□□ 0.71
RNF4-208ENST00000507247 KNSTRNQ9Y448 316 aa19.47■□□□□ 0.71
RNF4-208ENST00000507247 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
RNF4-208ENST00000507247 ANKRD26Q9UPS8 1709 aa19.47■□□□□ 0.71
RNF4-208ENST00000507247 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
RNF4-208ENST00000507247 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
RNF4-208ENST00000507247 AHDC1Q5TGY3 1603 aaPredicted RBP19.46■□□□□ 0.71
RNF4-208ENST00000507247 NPHP3Q7Z494 1330 aa19.46■□□□□ 0.71
RNF4-208ENST00000507247 TTC21BQ7Z4L5 1316 aa19.46■□□□□ 0.71
RNF4-208ENST00000507247 PSME1Q06323 249 aa19.45■□□□□ 0.7
RNF4-208ENST00000507247 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
RNF4-208ENST00000507247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.45■□□□□ 0.7
RNF4-208ENST00000507247 ALS2Q96Q42 1657 aa19.45■□□□□ 0.7
RNF4-208ENST00000507247 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
RNF4-208ENST00000507247 MARF1Q9Y4F3 1742 aaKnown RBP19.44■□□□□ 0.7
RNF4-208ENST00000507247 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
RNF4-208ENST00000507247 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
RNF4-208ENST00000507247 NME9Q86XW9 330 aa19.42■□□□□ 0.7
RNF4-208ENST00000507247 CGNL1Q0VF96 1302 aa19.42■□□□□ 0.7
RNF4-208ENST00000507247 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
RNF4-208ENST00000507247 USP54Q70EL1 1684 aa19.42■□□□□ 0.7
RNF4-208ENST00000507247 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
RNF4-208ENST00000507247 FYB1O15117 783 aa19.41■□□□□ 0.7
RNF4-208ENST00000507247 SOS2Q07890 1332 aaPredicted RBP19.41■□□□□ 0.7
RNF4-208ENST00000507247 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
RNF4-208ENST00000507247 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
RNF4-208ENST00000507247 ZRANB1Q9UGI0 708 aa19.4■□□□□ 0.7
RNF4-208ENST00000507247 SBNO1A3KN83 1393 aa19.4■□□□□ 0.7
RNF4-208ENST00000507247 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
RNF4-208ENST00000507247 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
RNF4-208ENST00000507247 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
RNF4-208ENST00000507247 NSD2O96028 1365 aa19.39■□□□□ 0.69
RNF4-208ENST00000507247 TNS3Q68CZ2 1445 aa19.38■□□□□ 0.69
RNF4-208ENST00000507247 OVOS2A0A0J9YW53 1432 aa19.37■□□□□ 0.69
RNF4-208ENST00000507247 OVOS2Q6IE36 1432 aa19.37■□□□□ 0.69
RNF4-208ENST00000507247 SOCS7O14512 581 aa19.37■□□□□ 0.69
RNF4-208ENST00000507247 USP31Q70CQ4 1352 aa19.36■□□□□ 0.69
RNF4-208ENST00000507247 SPATA31A3Q5VYP0 1347 aa19.36■□□□□ 0.69
RNF4-208ENST00000507247 CRYBG1Q9Y4K1 1723 aa19.36■□□□□ 0.69
RNF4-208ENST00000507247 PARD3Q8TEW0 1356 aa19.35■□□□□ 0.69
RNF4-208ENST00000507247 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
RNF4-208ENST00000507247 ABTB2Q8N961 1025 aa19.35■□□□□ 0.69
RNF4-208ENST00000507247 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
RNF4-208ENST00000507247 ANP32CO43423 234 aa19.33■□□□□ 0.68
RNF4-208ENST00000507247 PHRF1Q9P1Y6 1649 aaKnown RBP19.33■□□□□ 0.68
RNF4-208ENST00000507247 ABCA3Q99758 1704 aa19.32■□□□□ 0.68
RNF4-208ENST00000507247 NLRP6P59044 892 aa19.32■□□□□ 0.68
RNF4-208ENST00000507247 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
RNF4-208ENST00000507247 SLIT3O75094 1523 aa19.31■□□□□ 0.68
RNF4-208ENST00000507247 MORC1Q86VD1 984 aa19.31■□□□□ 0.68
RNF4-208ENST00000507247 COG3Q96JB2 828 aa19.31■□□□□ 0.68
RNF4-208ENST00000507247 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
RNF4-208ENST00000507247 MAP2P11137 1827 aaKnown RBP19.3■□□□□ 0.68
RNF4-208ENST00000507247 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
RNF4-208ENST00000507247 USP19O94966 1318 aa19.29■□□□□ 0.68
RNF4-208ENST00000507247 RALBP1Q15311 655 aa19.29■□□□□ 0.68
RNF4-208ENST00000507247 NLRP13Q86W25 1043 aa19.29■□□□□ 0.68
RNF4-208ENST00000507247 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
RNF4-208ENST00000507247 NFAT5O94916 1531 aa19.27■□□□□ 0.68
RNF4-208ENST00000507247 FBLN1P23142 703 aa19.27■□□□□ 0.68
RNF4-208ENST00000507247 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.68
RNF4-208ENST00000507247 MIER1Q8N108 512 aa19.27■□□□□ 0.68
RNF4-208ENST00000507247 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
RNF4-208ENST00000507247 SHPRHQ149N8 1683 aa19.27■□□□□ 0.67
RNF4-208ENST00000507247 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
RNF4-208ENST00000507247 LTN1O94822 1766 aa19.26■□□□□ 0.67
RNF4-208ENST00000507247 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
RNF4-208ENST00000507247 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
RNF4-208ENST00000507247 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
RNF4-208ENST00000507247 CABLES1Q8TDN4 633 aa19.24■□□□□ 0.67
RNF4-208ENST00000507247 RGS17Q9UGC6 210 aaPredicted RBP19.24■□□□□ 0.67
RNF4-208ENST00000507247 PEAK1Q9H792 1746 aa19.23■□□□□ 0.67
RNF4-208ENST00000507247 AATKQ6ZMQ8 1374 aa19.23■□□□□ 0.67
RNF4-208ENST00000507247 SOX12O15370 315 aa19.23■□□□□ 0.67
RNF4-208ENST00000507247 GCP02774 474 aa19.21■□□□□ 0.67
RNF4-208ENST00000507247 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
RNF4-208ENST00000507247 SMG6Q86US8 1419 aaKnown RBP19.21■□□□□ 0.67
RNF4-208ENST00000507247 KCNH5Q8NCM2 988 aa19.2■□□□□ 0.66
RNF4-208ENST00000507247 POLKQ9UBT6 870 aa19.19■□□□□ 0.66
RNF4-208ENST00000507247 EMILIN1Q9Y6C2 1016 aa19.19■□□□□ 0.66
RNF4-208ENST00000507247 JCADQ9P266 1359 aa19.19■□□□□ 0.66
RNF4-208ENST00000507247 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
RNF4-208ENST00000507247 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
RNF4-208ENST00000507247 COL18A1P39060 1754 aa19.17■□□□□ 0.66
RNF4-208ENST00000507247 MTHFSP49914 203 aa19.17■□□□□ 0.66
RNF4-208ENST00000507247 RGPD5Q99666 1765 aa19.16■□□□□ 0.66
RNF4-208ENST00000507247 CDK12Q9NYV4 1490 aaPredicted RBP19.16■□□□□ 0.66
RNF4-208ENST00000507247 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
RNF4-208ENST00000507247 ARHGEF25Q86VW2 580 aa19.15■□□□□ 0.66
RNF4-208ENST00000507247 COL3A1P02461 1466 aaPredicted RBP19.15■□□□□ 0.66
RNF4-208ENST00000507247 CPDO75976 1380 aa19.14■□□□□ 0.65
RNF4-208ENST00000507247 CCER2I3L3R5 266 aa19.13■□□□□ 0.65
RNF4-208ENST00000507247 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
RNF4-208ENST00000507247 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
RNF4-208ENST00000507247 KIAA0232Q92628 1395 aa19.13■□□□□ 0.65
RNF4-208ENST00000507247 LMO7Q8WWI1 1683 aa19.13■□□□□ 0.65
RNF4-208ENST00000507247 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
RNF4-208ENST00000507247 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
RNF4-208ENST00000507247 POTEAQ6S8J7 498 aa19.12■□□□□ 0.65
RNF4-208ENST00000507247 FLT4P35916 1363 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms