RNA–Protein interactions for RNA: ENST00000507208.1

MBD4-206, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD4, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-206ENST00000507208 CHMP5Q9NZZ3 219 aa20.52■□□□□ 0.88
MBD4-206ENST00000507208 NEXMIFQ5QGS0 1516 aa20.52■□□□□ 0.87
MBD4-206ENST00000507208 SMC5Q8IY18 1101 aa20.51■□□□□ 0.87
MBD4-206ENST00000507208 ISY1Q9ULR0 285 aaKnown RBP20.51■□□□□ 0.87
MBD4-206ENST00000507208 REREQ9P2R6 1566 aa20.51■□□□□ 0.87
MBD4-206ENST00000507208 ABCC3O15438 1527 aa20.5■□□□□ 0.87
MBD4-206ENST00000507208 DDX19BQ9UMR2 479 aa20.5■□□□□ 0.87
MBD4-206ENST00000507208 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
MBD4-206ENST00000507208 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
MBD4-206ENST00000507208 EVC2Q86UK5 1308 aa20.48■□□□□ 0.87
MBD4-206ENST00000507208 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
MBD4-206ENST00000507208 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
MBD4-206ENST00000507208 GOLGA6L3A6NEY3 463 aa20.46■□□□□ 0.87
MBD4-206ENST00000507208 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
MBD4-206ENST00000507208 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
MBD4-206ENST00000507208 DDIT3P35638 169 aa20.46■□□□□ 0.87
MBD4-206ENST00000507208 PLEKHF1Q96S99 279 aa20.46■□□□□ 0.87
MBD4-206ENST00000507208 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
MBD4-206ENST00000507208 BCL2L13Q9BXK5 485 aa20.46■□□□□ 0.87
MBD4-206ENST00000507208 CFAP65Q6ZU64 1925 aaKnown RBP20.45■□□□□ 0.86
MBD4-206ENST00000507208 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
MBD4-206ENST00000507208 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.86
MBD4-206ENST00000507208 MLECQ14165 292 aa20.45■□□□□ 0.86
MBD4-206ENST00000507208 SNX21Q969T3 373 aa20.45■□□□□ 0.86
MBD4-206ENST00000507208 RRAGDQ9NQL2 400 aaPredicted RBP20.45■□□□□ 0.86
MBD4-206ENST00000507208 DDX11L8A8MPP1 907 aa20.44■□□□□ 0.86
MBD4-206ENST00000507208 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
MBD4-206ENST00000507208 TRIM27P14373 513 aa20.44■□□□□ 0.86
MBD4-206ENST00000507208 ATF7IPQ6VMQ6 1270 aa20.44■□□□□ 0.86
MBD4-206ENST00000507208 PPIP5K1Q6PFW1 1433 aa20.43■□□□□ 0.86
MBD4-206ENST00000507208 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
MBD4-206ENST00000507208 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
MBD4-206ENST00000507208 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
MBD4-206ENST00000507208 CIZ1Q9ULV3 898 aaPredicted RBP20.42■□□□□ 0.86
MBD4-206ENST00000507208 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
MBD4-206ENST00000507208 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
MBD4-206ENST00000507208 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
MBD4-206ENST00000507208 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
MBD4-206ENST00000507208 MRE11P49959 708 aa20.41■□□□□ 0.86
MBD4-206ENST00000507208 ZBTB40Q9NUA8 1239 aa20.41■□□□□ 0.86
MBD4-206ENST00000507208 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
MBD4-206ENST00000507208 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
MBD4-206ENST00000507208 PNPLA6Q8IY17 1366 aa20.39■□□□□ 0.86
MBD4-206ENST00000507208 TRAK2O60296 914 aa20.39■□□□□ 0.86
MBD4-206ENST00000507208 CLCN1P35523 988 aa20.39■□□□□ 0.86
MBD4-206ENST00000507208 ALDH1L2Q3SY69 923 aa20.39■□□□□ 0.86
MBD4-206ENST00000507208 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.86
MBD4-206ENST00000507208 ZNF428Q96B54 188 aa20.39■□□□□ 0.86
MBD4-206ENST00000507208 A0A1W2PP64 1363 aa20.39■□□□□ 0.85
MBD4-206ENST00000507208 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
MBD4-206ENST00000507208 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
MBD4-206ENST00000507208 NUCB1Q02818 461 aa20.38■□□□□ 0.85
MBD4-206ENST00000507208 KDM4FA0A1W2PPD8 638 aa20.38■□□□□ 0.85
MBD4-206ENST00000507208 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
MBD4-206ENST00000507208 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
MBD4-206ENST00000507208 PTMSP20962 102 aa20.37■□□□□ 0.85
MBD4-206ENST00000507208 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
MBD4-206ENST00000507208 IPO8O15397 1037 aaKnown RBP20.36■□□□□ 0.85
MBD4-206ENST00000507208 CD163L1Q9NR16 1453 aa20.36■□□□□ 0.85
MBD4-206ENST00000507208 TSR2Q969E8 191 aaKnown RBP20.36■□□□□ 0.85
MBD4-206ENST00000507208 PTPRMP28827 1452 aa20.36■□□□□ 0.85
MBD4-206ENST00000507208 LRRC7Q96NW7 1537 aa20.35■□□□□ 0.85
MBD4-206ENST00000507208 GGT6Q6P531 493 aa20.35■□□□□ 0.85
MBD4-206ENST00000507208 ITPRIPQ8IWB1 547 aa20.35■□□□□ 0.85
MBD4-206ENST00000507208 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
MBD4-206ENST00000507208 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
MBD4-206ENST00000507208 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
MBD4-206ENST00000507208 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
MBD4-206ENST00000507208 BMP2KLQ5H9B9 411 aa20.34■□□□□ 0.85
MBD4-206ENST00000507208 AGLP35573 1532 aa20.33■□□□□ 0.85
MBD4-206ENST00000507208 TMEM57Q8N5G2 664 aa20.33■□□□□ 0.85
MBD4-206ENST00000507208 MYO5BQ9ULV0 1848 aa20.33■□□□□ 0.85
MBD4-206ENST00000507208 NOB1Q9ULX3 412 aaKnown RBP20.32■□□□□ 0.84
MBD4-206ENST00000507208 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
MBD4-206ENST00000507208 EIF5BO60841 1220 aaKnown RBP20.31■□□□□ 0.84
MBD4-206ENST00000507208 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
MBD4-206ENST00000507208 CHGAP10645 457 aaKnown RBP20.31■□□□□ 0.84
MBD4-206ENST00000507208 ADAMTSL3P82987 1691 aa20.3■□□□□ 0.84
MBD4-206ENST00000507208 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
MBD4-206ENST00000507208 SKOR2Q2VWA4 1001 aaPredicted RBP20.29■□□□□ 0.84
MBD4-206ENST00000507208 GRPEL1Q9HAV7 217 aa20.29■□□□□ 0.84
MBD4-206ENST00000507208 RAB3GAP1Q15042 981 aa20.29■□□□□ 0.84
MBD4-206ENST00000507208 CHD1LQ86WJ1 897 aa20.29■□□□□ 0.84
MBD4-206ENST00000507208 PANK2Q9BZ23 570 aa20.29■□□□□ 0.84
MBD4-206ENST00000507208 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
MBD4-206ENST00000507208 GBP4Q96PP9 640 aa20.28■□□□□ 0.84
MBD4-206ENST00000507208 CLEC17AQ6ZS10 378 aa20.28■□□□□ 0.84
MBD4-206ENST00000507208 GCC1Q96CN9 775 aa20.28■□□□□ 0.84
MBD4-206ENST00000507208 PREX1Q8TCU6 1659 aa20.27■□□□□ 0.84
MBD4-206ENST00000507208 IBTKQ9P2D0 1353 aaPredicted RBP20.27■□□□□ 0.84
MBD4-206ENST00000507208 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.83
MBD4-206ENST00000507208 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
MBD4-206ENST00000507208 KIF2CQ99661 725 aa20.26■□□□□ 0.83
MBD4-206ENST00000507208 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
MBD4-206ENST00000507208 FER1L4A9Z1Z3 1794 aa20.25■□□□□ 0.83
MBD4-206ENST00000507208 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
MBD4-206ENST00000507208 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
MBD4-206ENST00000507208 FYB1O15117 783 aa20.25■□□□□ 0.83
MBD4-206ENST00000507208 FCHSD2O94868 740 aa20.25■□□□□ 0.83
MBD4-206ENST00000507208 RIPK4P57078 832 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms