RNA–Protein interactions for RNA: ENST00000507123.1

SH3TC1-211, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-211ENST00000507123 CENPJQ9HC77 1338 aaPredicted RBP24.34■■□□□ 1.49
SH3TC1-211ENST00000507123 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
SH3TC1-211ENST00000507123 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
SH3TC1-211ENST00000507123 FAM83GA6ND36 823 aa24.31■■□□□ 1.48
SH3TC1-211ENST00000507123 VPS72Q15906 364 aa24.31■■□□□ 1.48
SH3TC1-211ENST00000507123 CCDC61Q9Y6R9 512 aa24.31■■□□□ 1.48
SH3TC1-211ENST00000507123 COL14A1Q05707 1796 aaKnown RBP24.31■■□□□ 1.48
SH3TC1-211ENST00000507123 PLEKHG3A1L390 1219 aa24.29■■□□□ 1.48
SH3TC1-211ENST00000507123 PAK3O75914 559 aaPredicted RBP24.29■■□□□ 1.48
SH3TC1-211ENST00000507123 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
SH3TC1-211ENST00000507123 ACEP12821 1306 aa24.29■■□□□ 1.48
SH3TC1-211ENST00000507123 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
SH3TC1-211ENST00000507123 NBPF8Q3BBV2 869 aa24.26■■□□□ 1.47
SH3TC1-211ENST00000507123 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
SH3TC1-211ENST00000507123 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
SH3TC1-211ENST00000507123 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
SH3TC1-211ENST00000507123 ROCK2O75116 1388 aaKnown RBP24.24■■□□□ 1.47
SH3TC1-211ENST00000507123 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
SH3TC1-211ENST00000507123 BTG4Q9NY30 223 aa24.23■■□□□ 1.47
SH3TC1-211ENST00000507123 ONECUT3O60422 494 aaPredicted RBP24.22■■□□□ 1.47
SH3TC1-211ENST00000507123 SEPT12Q8IYM1 358 aa24.21■■□□□ 1.47
SH3TC1-211ENST00000507123 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
SH3TC1-211ENST00000507123 NRKQ7Z2Y5 1582 aa24.2■■□□□ 1.46
SH3TC1-211ENST00000507123 KIAA0232Q92628 1395 aa24.19■■□□□ 1.46
SH3TC1-211ENST00000507123 PRDM11Q9NQV5 511 aa24.19■■□□□ 1.46
SH3TC1-211ENST00000507123 BRD4O60885 1362 aaPredicted RBP24.17■■□□□ 1.46
SH3TC1-211ENST00000507123 USP19O94966 1318 aa24.17■■□□□ 1.46
SH3TC1-211ENST00000507123 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
SH3TC1-211ENST00000507123 EVC2Q86UK5 1308 aa24.16■■□□□ 1.46
SH3TC1-211ENST00000507123 CCDC125Q86Z20 511 aa24.16■■□□□ 1.46
SH3TC1-211ENST00000507123 ABTB2Q8N961 1025 aa24.15■■□□□ 1.46
SH3TC1-211ENST00000507123 USP6P35125 1406 aa24.15■■□□□ 1.46
SH3TC1-211ENST00000507123 SPATA31A5Q5VU36 1347 aa24.14■■□□□ 1.46
SH3TC1-211ENST00000507123 SPATA31A7Q8IWB4 1347 aa24.14■■□□□ 1.46
SH3TC1-211ENST00000507123 CABP1Q9NZU7 370 aa24.14■■□□□ 1.45
SH3TC1-211ENST00000507123 BLMP54132 1417 aaPredicted RBP24.13■■□□□ 1.45
SH3TC1-211ENST00000507123 THSD7AQ9UPZ6 1657 aa24.13■■□□□ 1.45
SH3TC1-211ENST00000507123 ZC3H6P61129 1189 aaKnown RBP24.12■■□□□ 1.45
SH3TC1-211ENST00000507123 CHRNA2Q15822 529 aa24.12■■□□□ 1.45
SH3TC1-211ENST00000507123 FAM98CQ17RN3 349 aaKnown RBP24.12■■□□□ 1.45
SH3TC1-211ENST00000507123 CPDO75976 1380 aa24.12■■□□□ 1.45
SH3TC1-211ENST00000507123 SSH2Q76I76 1423 aa24.11■■□□□ 1.45
SH3TC1-211ENST00000507123 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
SH3TC1-211ENST00000507123 TONSLQ96HA7 1378 aa24.11■■□□□ 1.45
SH3TC1-211ENST00000507123 LMO7Q8WWI1 1683 aa24.11■■□□□ 1.45
SH3TC1-211ENST00000507123 SBNO2Q9Y2G9 1366 aa24.1■■□□□ 1.45
SH3TC1-211ENST00000507123 PIK3C2AO00443 1686 aa24.08■■□□□ 1.45
SH3TC1-211ENST00000507123 NLRP13Q86W25 1043 aa24.08■■□□□ 1.45
SH3TC1-211ENST00000507123 SLIT3O75094 1523 aa24.08■■□□□ 1.45
SH3TC1-211ENST00000507123 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
SH3TC1-211ENST00000507123 A0A0G2JS52 829 aa24.07■■□□□ 1.44
SH3TC1-211ENST00000507123 MYT1Q01538 1121 aa24.07■■□□□ 1.44
SH3TC1-211ENST00000507123 CAMTA1Q9Y6Y1 1673 aa24.07■■□□□ 1.44
SH3TC1-211ENST00000507123 SPATA31A1Q5TZJ5 1347 aa24.07■■□□□ 1.44
SH3TC1-211ENST00000507123 CARD11Q9BXL7 1154 aa24.06■■□□□ 1.44
SH3TC1-211ENST00000507123 GCP02774 474 aa24.05■■□□□ 1.44
SH3TC1-211ENST00000507123 STRN4Q9NRL3 753 aa24.04■■□□□ 1.44
SH3TC1-211ENST00000507123 CPSF1Q10570 1443 aaKnown RBP24.03■■□□□ 1.44
SH3TC1-211ENST00000507123 SRCAPQ6ZRS2 3230 aa24.02■■□□□ 1.44
SH3TC1-211ENST00000507123 NLRP6P59044 892 aa24.01■■□□□ 1.43
SH3TC1-211ENST00000507123 ZNF692Q9BU19 519 aaPredicted RBP24.01■■□□□ 1.43
SH3TC1-211ENST00000507123 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
SH3TC1-211ENST00000507123 TTC21BQ7Z4L5 1316 aa24■■□□□ 1.43
SH3TC1-211ENST00000507123 MON2Q7Z3U7 1717 aa23.99■■□□□ 1.43
SH3TC1-211ENST00000507123 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
SH3TC1-211ENST00000507123 LARP1Q6PKG0 1096 aaKnown RBP23.98■■□□□ 1.43
SH3TC1-211ENST00000507123 DEFB132Q7Z7B7 95 aa23.98■■□□□ 1.43
SH3TC1-211ENST00000507123 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
SH3TC1-211ENST00000507123 RGPD1P0DJD0 1748 aa23.97■■□□□ 1.43
SH3TC1-211ENST00000507123 EVA1CP58658 441 aa23.97■■□□□ 1.43
SH3TC1-211ENST00000507123 BARGINQ6ZT62 677 aa23.97■■□□□ 1.43
SH3TC1-211ENST00000507123 TTC21AQ8NDW8 1320 aa23.97■■□□□ 1.43
SH3TC1-211ENST00000507123 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
SH3TC1-211ENST00000507123 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
SH3TC1-211ENST00000507123 COL18A1P39060 1754 aa23.96■■□□□ 1.43
SH3TC1-211ENST00000507123 CD163L1Q9NR16 1453 aa23.95■■□□□ 1.42
SH3TC1-211ENST00000507123 FAM182BQ5T319 152 aa23.95■■□□□ 1.42
SH3TC1-211ENST00000507123 USP35Q9P2H5 1018 aa23.95■■□□□ 1.42
SH3TC1-211ENST00000507123 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
SH3TC1-211ENST00000507123 NFAT5O94916 1531 aa23.93■■□□□ 1.42
SH3TC1-211ENST00000507123 TNS1Q9HBL0 1735 aaKnown RBP23.93■■□□□ 1.42
SH3TC1-211ENST00000507123 CRB1P82279 1406 aa23.93■■□□□ 1.42
SH3TC1-211ENST00000507123 USP54Q70EL1 1684 aa23.92■■□□□ 1.42
SH3TC1-211ENST00000507123 THRAP3Q9Y2W1 955 aaKnown RBP23.91■■□□□ 1.42
SH3TC1-211ENST00000507123 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
SH3TC1-211ENST00000507123 ZBTB7CA1YPR0 619 aa23.9■■□□□ 1.42
SH3TC1-211ENST00000507123 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
SH3TC1-211ENST00000507123 DISP2A7MBM2 1401 aa23.9■■□□□ 1.42
SH3TC1-211ENST00000507123 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
SH3TC1-211ENST00000507123 BAG6P46379 1132 aa23.89■■□□□ 1.41
SH3TC1-211ENST00000507123 ARHGEF25Q86VW2 580 aa23.89■■□□□ 1.41
SH3TC1-211ENST00000507123 KCNH5Q8NCM2 988 aa23.89■■□□□ 1.41
SH3TC1-211ENST00000507123 PUS7Q96PZ0 661 aaKnown RBP23.89■■□□□ 1.41
SH3TC1-211ENST00000507123 TESK2Q96S53 571 aa23.88■■□□□ 1.41
SH3TC1-211ENST00000507123 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
SH3TC1-211ENST00000507123 FAM196AQ6ZSG2 479 aa23.87■■□□□ 1.41
SH3TC1-211ENST00000507123 ABCC6O95255 1503 aa23.87■■□□□ 1.41
SH3TC1-211ENST00000507123 AXIN2Q9Y2T1 843 aa23.86■■□□□ 1.41
SH3TC1-211ENST00000507123 EDC4Q6P2E9 1401 aaKnown RBP23.85■■□□□ 1.41
SH3TC1-211ENST00000507123 ST20-MTHFSA0A0A6YYL1 179 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms