RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
SIL1-209ENST00000507002 MTHFSP49914 203 aa16.87■□□□□ 0.29
SIL1-209ENST00000507002 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
SIL1-209ENST00000507002 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
SIL1-209ENST00000507002 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
SIL1-209ENST00000507002 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
SIL1-209ENST00000507002 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
SIL1-209ENST00000507002 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
SIL1-209ENST00000507002 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
SIL1-209ENST00000507002 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
SIL1-209ENST00000507002 TTC21AQ8NDW8 1320 aa16.84■□□□□ 0.29
SIL1-209ENST00000507002 TMEM94Q12767 1356 aa16.84■□□□□ 0.29
SIL1-209ENST00000507002 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
SIL1-209ENST00000507002 COG3Q96JB2 828 aa16.83■□□□□ 0.28
SIL1-209ENST00000507002 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
SIL1-209ENST00000507002 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
SIL1-209ENST00000507002 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
SIL1-209ENST00000507002 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
SIL1-209ENST00000507002 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
SIL1-209ENST00000507002 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
SIL1-209ENST00000507002 DCCP43146 1447 aa16.8■□□□□ 0.28
SIL1-209ENST00000507002 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
SIL1-209ENST00000507002 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
SIL1-209ENST00000507002 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
SIL1-209ENST00000507002 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
SIL1-209ENST00000507002 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
SIL1-209ENST00000507002 MARF1Q9Y4F3 1742 aaKnown RBP16.79■□□□□ 0.28
SIL1-209ENST00000507002 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
SIL1-209ENST00000507002 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
SIL1-209ENST00000507002 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
SIL1-209ENST00000507002 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.28
SIL1-209ENST00000507002 CDK12Q9NYV4 1490 aaPredicted RBP16.77■□□□□ 0.28
SIL1-209ENST00000507002 LRRC7Q96NW7 1537 aa16.76■□□□□ 0.27
SIL1-209ENST00000507002 ZNF335Q9H4Z2 1342 aaPredicted RBP16.76■□□□□ 0.27
SIL1-209ENST00000507002 ATF3P18847 181 aa16.76■□□□□ 0.27
SIL1-209ENST00000507002 FBLN1P23142 703 aa16.76■□□□□ 0.27
SIL1-209ENST00000507002 MST1RQ04912 1400 aa16.76■□□□□ 0.27
SIL1-209ENST00000507002 MSH6P52701 1360 aa16.76■□□□□ 0.27
SIL1-209ENST00000507002 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
SIL1-209ENST00000507002 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
SIL1-209ENST00000507002 NUDCQ9Y266 331 aa16.74■□□□□ 0.27
SIL1-209ENST00000507002 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
SIL1-209ENST00000507002 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
SIL1-209ENST00000507002 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
SIL1-209ENST00000507002 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
SIL1-209ENST00000507002 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
SIL1-209ENST00000507002 PSME1Q06323 249 aa16.73■□□□□ 0.27
SIL1-209ENST00000507002 CADPS2Q86UW7 1296 aa16.73■□□□□ 0.27
SIL1-209ENST00000507002 SALL2Q9Y467 1007 aaPredicted RBP16.73■□□□□ 0.27
SIL1-209ENST00000507002 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
SIL1-209ENST00000507002 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
SIL1-209ENST00000507002 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
SIL1-209ENST00000507002 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
SIL1-209ENST00000507002 RRS1Q15050 365 aaKnown RBP16.72■□□□□ 0.27
SIL1-209ENST00000507002 PEAK1Q9H792 1746 aa16.72■□□□□ 0.27
SIL1-209ENST00000507002 NLRP6P59044 892 aa16.71■□□□□ 0.27
SIL1-209ENST00000507002 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
SIL1-209ENST00000507002 APAF1O14727 1248 aa16.7■□□□□ 0.26
SIL1-209ENST00000507002 U2SURPO15042 1029 aaKnown RBP16.7■□□□□ 0.26
SIL1-209ENST00000507002 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
SIL1-209ENST00000507002 ABTB2Q8N961 1025 aa16.7■□□□□ 0.26
SIL1-209ENST00000507002 FOXO3O43524 673 aa16.69■□□□□ 0.26
SIL1-209ENST00000507002 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
SIL1-209ENST00000507002 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
SIL1-209ENST00000507002 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
SIL1-209ENST00000507002 SOX12O15370 315 aa16.67■□□□□ 0.26
SIL1-209ENST00000507002 ALS2Q96Q42 1657 aa16.66■□□□□ 0.26
SIL1-209ENST00000507002 IL13P35225 146 aa16.66■□□□□ 0.26
SIL1-209ENST00000507002 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
SIL1-209ENST00000507002 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
SIL1-209ENST00000507002 LTN1O94822 1766 aa16.66■□□□□ 0.26
SIL1-209ENST00000507002 MAP3K19Q56UN5 1328 aa16.66■□□□□ 0.26
SIL1-209ENST00000507002 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
SIL1-209ENST00000507002 NFAT5O94916 1531 aa16.65■□□□□ 0.26
SIL1-209ENST00000507002 SBNO1A3KN83 1393 aa16.64■□□□□ 0.26
SIL1-209ENST00000507002 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
SIL1-209ENST00000507002 FLT4P35916 1363 aa16.64■□□□□ 0.25
SIL1-209ENST00000507002 RGPD1P0DJD0 1748 aa16.63■□□□□ 0.25
SIL1-209ENST00000507002 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
SIL1-209ENST00000507002 SLIT3O75094 1523 aa16.63■□□□□ 0.25
SIL1-209ENST00000507002 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
SIL1-209ENST00000507002 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
SIL1-209ENST00000507002 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
SIL1-209ENST00000507002 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
SIL1-209ENST00000507002 FCHSD2O94868 740 aa16.61■□□□□ 0.25
SIL1-209ENST00000507002 AMPHP49418 695 aa16.61■□□□□ 0.25
SIL1-209ENST00000507002 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
SIL1-209ENST00000507002 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
SIL1-209ENST00000507002 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
SIL1-209ENST00000507002 PXDNQ92626 1479 aa16.61■□□□□ 0.25
SIL1-209ENST00000507002 PHRF1Q9P1Y6 1649 aaKnown RBP16.6■□□□□ 0.25
SIL1-209ENST00000507002 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
SIL1-209ENST00000507002 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
SIL1-209ENST00000507002 HSP90AB2PQ58FF8 381 aa16.6■□□□□ 0.25
SIL1-209ENST00000507002 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
SIL1-209ENST00000507002 RRP7AQ9Y3A4 280 aaKnown RBP16.6■□□□□ 0.25
SIL1-209ENST00000507002 NEFLP07196 543 aa16.59■□□□□ 0.25
SIL1-209ENST00000507002 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
SIL1-209ENST00000507002 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
SIL1-209ENST00000507002 KCNH5Q8NCM2 988 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms