RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 SH3BP2P78314 561 aa9.12□□□□□ -0.95
SSBP2-206ENST00000506960 PHOX2BQ99453 314 aa9.12□□□□□ -0.95
SSBP2-206ENST00000506960 NUDT12Q9BQG2 462 aa9.12□□□□□ -0.95
SSBP2-206ENST00000506960 VARSP26640 1264 aaKnown RBP9.11□□□□□ -0.95
SSBP2-206ENST00000506960 USP46P62068 366 aa9.11□□□□□ -0.95
SSBP2-206ENST00000506960 ARHGEF15O94989 841 aa9.1□□□□□ -0.95
SSBP2-206ENST00000506960 COL25A1Q9BXS0 654 aaPredicted RBP9.1□□□□□ -0.95
SSBP2-206ENST00000506960 SLURP2P0DP57 97 aa9.09□□□□□ -0.95
SSBP2-206ENST00000506960 KRTAP9-6A0A140TA67 174 aa9.08□□□□□ -0.96
SSBP2-206ENST00000506960 KDM4AO75164 1064 aa9.08□□□□□ -0.96
SSBP2-206ENST00000506960 MAP2K5Q13163 448 aa9.08□□□□□ -0.96
SSBP2-206ENST00000506960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
SSBP2-206ENST00000506960 GPR161Q8N6U8 529 aaKnown RBP9.08□□□□□ -0.96
SSBP2-206ENST00000506960 NANOS1Q8WY41 292 aaKnown RBP9.08□□□□□ -0.96
SSBP2-206ENST00000506960 PTCRAQ6ISU1 281 aaPredicted RBP9.07□□□□□ -0.96
SSBP2-206ENST00000506960 TLL2Q9Y6L7 1015 aa9.07□□□□□ -0.96
SSBP2-206ENST00000506960 C6orf118Q5T5N4 469 aa9.06□□□□□ -0.96
SSBP2-206ENST00000506960 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
SSBP2-206ENST00000506960 KLF16Q9BXK1 252 aaPredicted RBP9.06□□□□□ -0.96
SSBP2-206ENST00000506960 BMP2P12643 396 aa9.05□□□□□ -0.96
SSBP2-206ENST00000506960 PLA2G4EQ3MJ16 856 aa9.05□□□□□ -0.96
SSBP2-206ENST00000506960 Q8N3U1 123 aa9.05□□□□□ -0.96
SSBP2-206ENST00000506960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.96
SSBP2-206ENST00000506960 GALNT6Q8NCL4 622 aa9.04□□□□□ -0.96
SSBP2-206ENST00000506960 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
SSBP2-206ENST00000506960 K7ELQ4 463 aaPredicted RBP9.03□□□□□ -0.96
SSBP2-206ENST00000506960 IRF6O14896 467 aa9.03□□□□□ -0.96
SSBP2-206ENST00000506960 MAP3K10Q02779 954 aa9.03□□□□□ -0.96
SSBP2-206ENST00000506960 KRTAP1-3Q8IUG1 177 aa9.03□□□□□ -0.96
SSBP2-206ENST00000506960 ENAMQ9NRM1 1142 aa9.03□□□□□ -0.96
SSBP2-206ENST00000506960 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
SSBP2-206ENST00000506960 CD46P15529 392 aa9.02□□□□□ -0.97
SSBP2-206ENST00000506960 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
SSBP2-206ENST00000506960 SOS2Q07890 1332 aaPredicted RBP9.02□□□□□ -0.97
SSBP2-206ENST00000506960 CCNYL3P0C7X3 344 aa9.01□□□□□ -0.97
SSBP2-206ENST00000506960 RETREG3Q86VR2 466 aa9.01□□□□□ -0.97
SSBP2-206ENST00000506960 FAM174AQ8TBP5 190 aa9.01□□□□□ -0.97
SSBP2-206ENST00000506960 MINK1Q8N4C8 1332 aaPredicted RBP9.01□□□□□ -0.97
SSBP2-206ENST00000506960 SPTLC1O15269 473 aa9□□□□□ -0.97
SSBP2-206ENST00000506960 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
SSBP2-206ENST00000506960 WHAMMQ8TF30 809 aa9□□□□□ -0.97
SSBP2-206ENST00000506960 BAP1Q92560 729 aa8.99□□□□□ -0.97
SSBP2-206ENST00000506960 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
SSBP2-206ENST00000506960 DNMT3LQ9UJW3 386 aa8.99□□□□□ -0.97
SSBP2-206ENST00000506960 MS4A1P11836 297 aa8.98□□□□□ -0.97
SSBP2-206ENST00000506960 NR5A1Q13285 461 aa8.98□□□□□ -0.97
SSBP2-206ENST00000506960 RNFT1Q5M7Z0 435 aa8.98□□□□□ -0.97
SSBP2-206ENST00000506960 ZNF511Q8NB15 262 aa8.98□□□□□ -0.97
SSBP2-206ENST00000506960 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
SSBP2-206ENST00000506960 HOXA2O43364 376 aa8.97□□□□□ -0.97
SSBP2-206ENST00000506960 MDM2Q00987 491 aaPredicted RBP8.97□□□□□ -0.97
SSBP2-206ENST00000506960 EVA1BQ9NVM1 165 aa8.97□□□□□ -0.97
SSBP2-206ENST00000506960 PTSQ03393 145 aa8.96□□□□□ -0.98
SSBP2-206ENST00000506960 CDK15Q96Q40 435 aa8.96□□□□□ -0.98
SSBP2-206ENST00000506960 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
SSBP2-206ENST00000506960 PTPRNQ16849 979 aa8.95□□□□□ -0.98
SSBP2-206ENST00000506960 LINC01559Q495D7 138 aa8.95□□□□□ -0.98
SSBP2-206ENST00000506960 SV2AQ7L0J3 742 aa8.95□□□□□ -0.98
SSBP2-206ENST00000506960 BEND7Q8N7W2 519 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-206ENST00000506960 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
SSBP2-206ENST00000506960 ITPKCQ96DU7 683 aa8.95□□□□□ -0.98
SSBP2-206ENST00000506960 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
SSBP2-206ENST00000506960 ZMYND10O75800 440 aa8.94□□□□□ -0.98
SSBP2-206ENST00000506960 PROCP04070 461 aa8.94□□□□□ -0.98
SSBP2-206ENST00000506960 PODNQ7Z5L7 613 aa8.94□□□□□ -0.98
SSBP2-206ENST00000506960 MEIOBQ8N635 442 aa8.94□□□□□ -0.98
SSBP2-206ENST00000506960 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
SSBP2-206ENST00000506960 BARGINQ6ZT62 677 aa8.93□□□□□ -0.98
SSBP2-206ENST00000506960 CCDC155Q8N6L0 562 aa8.93□□□□□ -0.98
SSBP2-206ENST00000506960 TTLL8A6PVC2 850 aa8.92□□□□□ -0.98
SSBP2-206ENST00000506960 ADAMTS2O95450 1211 aa8.91□□□□□ -0.98
SSBP2-206ENST00000506960 SRSF11Q05519 484 aaKnown RBP8.91□□□□□ -0.98
SSBP2-206ENST00000506960 HLA-CQ95604 372 aa8.91□□□□□ -0.98
SSBP2-206ENST00000506960 CLCN1P35523 988 aa8.9□□□□□ -0.98
SSBP2-206ENST00000506960 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
SSBP2-206ENST00000506960 LYPD4Q6UWN0 246 aa8.9□□□□□ -0.98
SSBP2-206ENST00000506960 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
SSBP2-206ENST00000506960 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
SSBP2-206ENST00000506960 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
SSBP2-206ENST00000506960 VWA5B2Q8N398 1253 aa8.89□□□□□ -0.99
SSBP2-206ENST00000506960 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
SSBP2-206ENST00000506960 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-206ENST00000506960 ITGB2P05107 769 aa8.88□□□□□ -0.99
SSBP2-206ENST00000506960 ITGA6P23229 1130 aa8.88□□□□□ -0.99
SSBP2-206ENST00000506960 CDC14CA4D256 554 aa8.87□□□□□ -0.99
SSBP2-206ENST00000506960 BTBD11A6QL63 1104 aa8.87□□□□□ -0.99
SSBP2-206ENST00000506960 CELA2BP08218 269 aaPredicted RBP8.87□□□□□ -0.99
SSBP2-206ENST00000506960 SLC35F4A4IF30 521 aa8.86□□□□□ -0.99
SSBP2-206ENST00000506960 BAG6P46379 1132 aa8.86□□□□□ -0.99
SSBP2-206ENST00000506960 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
SSBP2-206ENST00000506960 NR3C2P08235 984 aa8.85□□□□□ -0.99
SSBP2-206ENST00000506960 CNTNAP5Q8WYK1 1306 aa8.84□□□□□ -0.99
SSBP2-206ENST00000506960 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
SSBP2-206ENST00000506960 AMHR2Q16671 573 aa8.84□□□□□ -0.99
SSBP2-206ENST00000506960 TTLL12Q14166 644 aaPredicted RBP8.83□□□□□ -1
SSBP2-206ENST00000506960 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
SSBP2-206ENST00000506960 GRM5P41594 1212 aa8.82□□□□□ -1
SSBP2-206ENST00000506960 DESI1Q6ICB0 168 aa8.82□□□□□ -1
SSBP2-206ENST00000506960 ALYREFQ86V81 257 aaKnown RBP8.82□□□□□ -1
SSBP2-206ENST00000506960 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms