RNA–Protein interactions for RNA: ENST00000506951.5

PACRGL-217, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-217ENST00000506951 UPF1Q92900 1129 aaKnown RBP eCLIP31.36■■■□□ 2.61
PACRGL-217ENST00000506951 CRYBG1Q9Y4K1 1723 aa31.35■■■□□ 2.61
PACRGL-217ENST00000506951 PLEKHG5O94827 1062 aa31.35■■■□□ 2.61
PACRGL-217ENST00000506951 GJD4Q96KN9 370 aaPredicted RBP31.35■■■□□ 2.61
PACRGL-217ENST00000506951 PLEKHG3A1L390 1219 aa31.34■■■□□ 2.61
PACRGL-217ENST00000506951 ACEP12821 1306 aa31.33■■■□□ 2.61
PACRGL-217ENST00000506951 COL14A1Q05707 1796 aaKnown RBP31.33■■■□□ 2.61
PACRGL-217ENST00000506951 PPIP5K1Q6PFW1 1433 aa31.32■■■□□ 2.6
PACRGL-217ENST00000506951 ATAD2Q6PL18 1390 aa31.31■■■□□ 2.6
PACRGL-217ENST00000506951 EVC2Q86UK5 1308 aa31.3■■■□□ 2.6
PACRGL-217ENST00000506951 RALGAPBQ86X10 1494 aa31.29■■■□□ 2.6
PACRGL-217ENST00000506951 GLI3P10071 1580 aa31.28■■■□□ 2.6
PACRGL-217ENST00000506951 NBPF8Q3BBV2 869 aa31.28■■■□□ 2.6
PACRGL-217ENST00000506951 BRD4O60885 1362 aaPredicted RBP31.28■■■□□ 2.6
PACRGL-217ENST00000506951 PHRF1Q9P1Y6 1649 aaKnown RBP31.27■■■□□ 2.6
PACRGL-217ENST00000506951 VPS72Q15906 364 aa31.26■■■□□ 2.59
PACRGL-217ENST00000506951 CABP2Q9NPB3 220 aa31.26■■■□□ 2.59
PACRGL-217ENST00000506951 NRAPQ86VF7 1730 aa31.25■■■□□ 2.59
PACRGL-217ENST00000506951 FAM83GA6ND36 823 aa31.24■■■□□ 2.59
PACRGL-217ENST00000506951 CCDC9Q9Y3X0 531 aaKnown RBP31.21■■■□□ 2.59
PACRGL-217ENST00000506951 CARD11Q9BXL7 1154 aa31.2■■■□□ 2.59
PACRGL-217ENST00000506951 PRDM11Q9NQV5 511 aa31.2■■■□□ 2.59
PACRGL-217ENST00000506951 SBNO2Q9Y2G9 1366 aa31.19■■■□□ 2.58
PACRGL-217ENST00000506951 ABTB2Q8N961 1025 aa31.19■■■□□ 2.58
PACRGL-217ENST00000506951 BTG4Q9NY30 223 aa31.19■■■□□ 2.58
PACRGL-217ENST00000506951 CABP1Q9NZU7 370 aa31.16■■■□□ 2.58
PACRGL-217ENST00000506951 USP6P35125 1406 aa31.15■■■□□ 2.58
PACRGL-217ENST00000506951 NRKQ7Z2Y5 1582 aa31.15■■■□□ 2.58
PACRGL-217ENST00000506951 NLRP13Q86W25 1043 aa31.14■■■□□ 2.58
PACRGL-217ENST00000506951 BRWD3Q6RI45 1802 aa31.14■■■□□ 2.58
PACRGL-217ENST00000506951 KIAA0232Q92628 1395 aa31.14■■■□□ 2.58
PACRGL-217ENST00000506951 NUTM2GQ5VZR2 741 aa31.13■■■□□ 2.57
PACRGL-217ENST00000506951 AKAP12Q02952 1782 aa31.12■■■□□ 2.57
PACRGL-217ENST00000506951 ONECUT3O60422 494 aaPredicted RBP31.11■■■□□ 2.57
PACRGL-217ENST00000506951 USP19O94966 1318 aa31.11■■■□□ 2.57
PACRGL-217ENST00000506951 CCDC125Q86Z20 511 aa31.1■■■□□ 2.57
PACRGL-217ENST00000506951 SEPT12Q8IYM1 358 aa31.09■■■□□ 2.57
PACRGL-217ENST00000506951 ZNF692Q9BU19 519 aaPredicted RBP31.09■■■□□ 2.57
PACRGL-217ENST00000506951 CPDO75976 1380 aa31.08■■■□□ 2.57
PACRGL-217ENST00000506951 ZC3H6P61129 1189 aaKnown RBP31.06■■■□□ 2.56
PACRGL-217ENST00000506951 A0A0G2JS52 829 aa31.05■■■□□ 2.56
PACRGL-217ENST00000506951 MYT1Q01538 1121 aa31.05■■■□□ 2.56
PACRGL-217ENST00000506951 SPATA31A5Q5VU36 1347 aa31.04■■■□□ 2.56
PACRGL-217ENST00000506951 SPATA31A7Q8IWB4 1347 aa31.04■■■□□ 2.56
PACRGL-217ENST00000506951 EP400Q96L91 3159 aa31.04■■■□□ 2.56
PACRGL-217ENST00000506951 PIK3C2AO00443 1686 aa31.03■■■□□ 2.56
PACRGL-217ENST00000506951 CHRNA2Q15822 529 aa31.03■■■□□ 2.56
PACRGL-217ENST00000506951 SSH2Q76I76 1423 aa31.03■■■□□ 2.56
PACRGL-217ENST00000506951 SLC24A1O60721 1099 aa31.02■■■□□ 2.56
PACRGL-217ENST00000506951 LMO7Q8WWI1 1683 aa31.01■■■□□ 2.55
PACRGL-217ENST00000506951 GCP02774 474 aa31.01■■■□□ 2.55
PACRGL-217ENST00000506951 NLRP6P59044 892 aa31.01■■■□□ 2.55
PACRGL-217ENST00000506951 FAM98CQ17RN3 349 aaKnown RBP31.01■■■□□ 2.55
PACRGL-217ENST00000506951 KRT27Q7Z3Y8 459 aa31.01■■■□□ 2.55
PACRGL-217ENST00000506951 SLIT3O75094 1523 aa31.01■■■□□ 2.55
PACRGL-217ENST00000506951 MON2Q7Z3U7 1717 aa31.01■■■□□ 2.55
PACRGL-217ENST00000506951 TTC21AQ8NDW8 1320 aa31■■■□□ 2.55
PACRGL-217ENST00000506951 CLSPNQ9HAW4 1339 aa30.99■■■□□ 2.55
PACRGL-217ENST00000506951 CPSF1Q10570 1443 aaKnown RBP30.99■■■□□ 2.55
PACRGL-217ENST00000506951 THSD7AQ9UPZ6 1657 aa30.99■■■□□ 2.55
PACRGL-217ENST00000506951 BLMP54132 1417 aaPredicted RBP30.98■■■□□ 2.55
PACRGL-217ENST00000506951 KTN1Q86UP2 1357 aaKnown RBP30.98■■■□□ 2.55
PACRGL-217ENST00000506951 EVA1CP58658 441 aa30.98■■■□□ 2.55
PACRGL-217ENST00000506951 STRN4Q9NRL3 753 aa30.98■■■□□ 2.55
PACRGL-217ENST00000506951 PUS7Q96PZ0 661 aaKnown RBP30.97■■■□□ 2.55
PACRGL-217ENST00000506951 SPATA31A1Q5TZJ5 1347 aa30.97■■■□□ 2.55
PACRGL-217ENST00000506951 TTC21BQ7Z4L5 1316 aa30.96■■■□□ 2.55
PACRGL-217ENST00000506951 CAMTA1Q9Y6Y1 1673 aa30.95■■■□□ 2.55
PACRGL-217ENST00000506951 TIMELESSQ9UNS1 1208 aa30.95■■■□□ 2.55
PACRGL-217ENST00000506951 SF3B2Q13435 895 aaKnown RBP30.94■■■□□ 2.54
PACRGL-217ENST00000506951 KCNH5Q8NCM2 988 aa30.92■■■□□ 2.54
PACRGL-217ENST00000506951 HDGFL2Q7Z4V5 671 aaPredicted RBP30.91■■■□□ 2.54
PACRGL-217ENST00000506951 NINLQ9Y2I6 1382 aa30.91■■■□□ 2.54
PACRGL-217ENST00000506951 TMC1Q8TDI8 760 aa30.9■■■□□ 2.54
PACRGL-217ENST00000506951 AATKQ6ZMQ8 1374 aa30.9■■■□□ 2.54
PACRGL-217ENST00000506951 COL5A2P05997 1499 aaPredicted RBP30.89■■■□□ 2.53
PACRGL-217ENST00000506951 USP54Q70EL1 1684 aa30.88■■■□□ 2.53
PACRGL-217ENST00000506951 TERF2IPQ9NYB0 399 aa30.88■■■□□ 2.53
PACRGL-217ENST00000506951 ST20-MTHFSA0A0A6YYL1 179 aa30.87■■■□□ 2.53
PACRGL-217ENST00000506951 BARGINQ6ZT62 677 aa30.87■■■□□ 2.53
PACRGL-217ENST00000506951 PCGF6Q9BYE7 350 aa30.87■■■□□ 2.53
PACRGL-217ENST00000506951 THRAP3Q9Y2W1 955 aaKnown RBP30.86■■■□□ 2.53
PACRGL-217ENST00000506951 CD163L1Q9NR16 1453 aa30.86■■■□□ 2.53
PACRGL-217ENST00000506951 RGPD1P0DJD0 1748 aa30.85■■■□□ 2.53
PACRGL-217ENST00000506951 ZBTB7CA1YPR0 619 aa30.85■■■□□ 2.53
PACRGL-217ENST00000506951 USP35Q9P2H5 1018 aa30.85■■■□□ 2.53
PACRGL-217ENST00000506951 EDC4Q6P2E9 1401 aaKnown RBP30.84■■■□□ 2.53
PACRGL-217ENST00000506951 LARP1Q6PKG0 1096 aaKnown RBP30.84■■■□□ 2.53
PACRGL-217ENST00000506951 TCP11L2Q8N4U5 519 aa30.84■■■□□ 2.53
PACRGL-217ENST00000506951 TESK2Q96S53 571 aa30.84■■■□□ 2.53
PACRGL-217ENST00000506951 ABCC6O95255 1503 aa30.83■■■□□ 2.53
PACRGL-217ENST00000506951 CRB1P82279 1406 aa30.83■■■□□ 2.53
PACRGL-217ENST00000506951 USP47Q96K76 1375 aa30.83■■■□□ 2.53
PACRGL-217ENST00000506951 COL18A1P39060 1754 aa30.83■■■□□ 2.53
PACRGL-217ENST00000506951 USP31Q70CQ4 1352 aa30.81■■■□□ 2.52
PACRGL-217ENST00000506951 SLC12A5Q9H2X9 1139 aa30.81■■■□□ 2.52
PACRGL-217ENST00000506951 NFAT5O94916 1531 aa30.8■■■□□ 2.52
PACRGL-217ENST00000506951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.8■■■□□ 2.52
PACRGL-217ENST00000506951 A0A1W2PP64 1363 aa30.79■■■□□ 2.52
PACRGL-217ENST00000506951 PARP4Q9UKK3 1724 aaKnown RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms