RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 LMOD2Q6P5Q4 547 aa27.96■■■□□ 2.07
SNX25-204ENST00000506896 CDK12Q9NYV4 1490 aaPredicted RBP27.95■■■□□ 2.07
SNX25-204ENST00000506896 BCL9LQ86UU0 1499 aa27.95■■■□□ 2.06
SNX25-204ENST00000506896 ACEP12821 1306 aa27.94■■■□□ 2.06
SNX25-204ENST00000506896 ABCA3Q99758 1704 aa27.94■■■□□ 2.06
SNX25-204ENST00000506896 PPIP5K1Q6PFW1 1433 aa27.93■■■□□ 2.06
SNX25-204ENST00000506896 TESK2Q96S53 571 aa27.93■■■□□ 2.06
SNX25-204ENST00000506896 TRPC5Q9UL62 973 aaPredicted RBP27.93■■■□□ 2.06
SNX25-204ENST00000506896 ATAD2Q6PL18 1390 aa27.93■■■□□ 2.06
SNX25-204ENST00000506896 SLIT2O94813 1529 aa27.91■■■□□ 2.06
SNX25-204ENST00000506896 ATRNO75882 1429 aa27.91■■■□□ 2.06
SNX25-204ENST00000506896 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
SNX25-204ENST00000506896 PAK3O75914 559 aaPredicted RBP27.89■■■□□ 2.06
SNX25-204ENST00000506896 HAP1P54257 671 aaPredicted RBP27.88■■■□□ 2.05
SNX25-204ENST00000506896 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.87■■■□□ 2.05
SNX25-204ENST00000506896 PLEKHG5O94827 1062 aa27.87■■■□□ 2.05
SNX25-204ENST00000506896 CABP1Q9NZU7 370 aa27.87■■■□□ 2.05
SNX25-204ENST00000506896 CRYBG1Q9Y4K1 1723 aa27.87■■■□□ 2.05
SNX25-204ENST00000506896 UNC5CLQ8IV45 518 aa27.85■■■□□ 2.05
SNX25-204ENST00000506896 FAM83GA6ND36 823 aa27.84■■■□□ 2.05
SNX25-204ENST00000506896 EIF4G2P78344 907 aaKnown RBP eCLIP27.84■■■□□ 2.05
SNX25-204ENST00000506896 TMF1P82094 1093 aa27.84■■■□□ 2.05
SNX25-204ENST00000506896 RGS12O14924 1447 aa27.84■■■□□ 2.05
SNX25-204ENST00000506896 BRD4O60885 1362 aaPredicted RBP27.83■■■□□ 2.05
SNX25-204ENST00000506896 NWD2Q9ULI1 1742 aa27.81■■■□□ 2.04
SNX25-204ENST00000506896 GJD4Q96KN9 370 aaPredicted RBP27.81■■■□□ 2.04
SNX25-204ENST00000506896 CDCA8Q53HL2 280 aa27.8■■■□□ 2.04
SNX25-204ENST00000506896 PLCH1Q4KWH8 1693 aa27.8■■■□□ 2.04
SNX25-204ENST00000506896 ZNF692Q9BU19 519 aaPredicted RBP27.79■■■□□ 2.04
SNX25-204ENST00000506896 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
SNX25-204ENST00000506896 USP6P35125 1406 aa27.76■■■□□ 2.04
SNX25-204ENST00000506896 ABTB2Q8N961 1025 aa27.76■■■□□ 2.03
SNX25-204ENST00000506896 VPS72Q15906 364 aa27.75■■■□□ 2.03
SNX25-204ENST00000506896 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
SNX25-204ENST00000506896 UPF1Q92900 1129 aaKnown RBP eCLIP27.75■■■□□ 2.03
SNX25-204ENST00000506896 COL14A1Q05707 1796 aaKnown RBP27.75■■■□□ 2.03
SNX25-204ENST00000506896 CPSF1Q10570 1443 aaKnown RBP27.75■■■□□ 2.03
SNX25-204ENST00000506896 SSH2Q76I76 1423 aa27.75■■■□□ 2.03
SNX25-204ENST00000506896 PHRF1Q9P1Y6 1649 aaKnown RBP27.74■■■□□ 2.03
SNX25-204ENST00000506896 GLI3P10071 1580 aa27.74■■■□□ 2.03
SNX25-204ENST00000506896 HSPA5P11021 654 aaKnown RBP27.74■■■□□ 2.03
SNX25-204ENST00000506896 TMC1Q8TDI8 760 aa27.74■■■□□ 2.03
SNX25-204ENST00000506896 AKAP12Q02952 1782 aa27.73■■■□□ 2.03
SNX25-204ENST00000506896 HDGFL2Q7Z4V5 671 aaPredicted RBP27.71■■■□□ 2.03
SNX25-204ENST00000506896 NRAPQ86VF7 1730 aa27.71■■■□□ 2.03
SNX25-204ENST00000506896 BTG4Q9NY30 223 aa27.71■■■□□ 2.03
SNX25-204ENST00000506896 TERF2IPQ9NYB0 399 aa27.71■■■□□ 2.03
SNX25-204ENST00000506896 USP19O94966 1318 aa27.7■■■□□ 2.03
SNX25-204ENST00000506896 SLC12A5Q9H2X9 1139 aa27.7■■■□□ 2.02
SNX25-204ENST00000506896 KTN1Q86UP2 1357 aaKnown RBP27.7■■■□□ 2.02
SNX25-204ENST00000506896 NLRP13Q86W25 1043 aa27.69■■■□□ 2.02
SNX25-204ENST00000506896 PRDM11Q9NQV5 511 aa27.68■■■□□ 2.02
SNX25-204ENST00000506896 KIAA0232Q92628 1395 aa27.68■■■□□ 2.02
SNX25-204ENST00000506896 CD163L1Q9NR16 1453 aa27.68■■■□□ 2.02
SNX25-204ENST00000506896 ONECUT3O60422 494 aaPredicted RBP27.67■■■□□ 2.02
SNX25-204ENST00000506896 TTC21AQ8NDW8 1320 aa27.67■■■□□ 2.02
SNX25-204ENST00000506896 ZC3H6P61129 1189 aaKnown RBP27.66■■■□□ 2.02
SNX25-204ENST00000506896 MON2Q7Z3U7 1717 aa27.66■■■□□ 2.02
SNX25-204ENST00000506896 TTC21BQ7Z4L5 1316 aa27.65■■■□□ 2.02
SNX25-204ENST00000506896 NRKQ7Z2Y5 1582 aa27.65■■■□□ 2.02
SNX25-204ENST00000506896 GCP02774 474 aa27.64■■■□□ 2.02
SNX25-204ENST00000506896 A0A1W2PP64 1363 aa27.63■■■□□ 2.01
SNX25-204ENST00000506896 NLRP6P59044 892 aa27.63■■■□□ 2.01
SNX25-204ENST00000506896 CHRNA2Q15822 529 aa27.63■■■□□ 2.01
SNX25-204ENST00000506896 PIK3C2AO00443 1686 aa27.62■■■□□ 2.01
SNX25-204ENST00000506896 CPDO75976 1380 aa27.62■■■□□ 2.01
SNX25-204ENST00000506896 CCDC9Q9Y3X0 531 aaKnown RBP27.62■■■□□ 2.01
SNX25-204ENST00000506896 ANKRD36BQ8N2N9 1353 aa27.61■■■□□ 2.01
SNX25-204ENST00000506896 EDC4Q6P2E9 1401 aaKnown RBP27.61■■■□□ 2.01
SNX25-204ENST00000506896 BRWD3Q6RI45 1802 aa27.6■■■□□ 2.01
SNX25-204ENST00000506896 SLIT3O75094 1523 aa27.59■■■□□ 2.01
SNX25-204ENST00000506896 SEPT12Q8IYM1 358 aa27.59■■■□□ 2.01
SNX25-204ENST00000506896 EP400Q96L91 3159 aa27.59■■■□□ 2.01
SNX25-204ENST00000506896 SPATA31A5Q5VU36 1347 aa27.58■■■□□ 2.01
SNX25-204ENST00000506896 SPATA31A7Q8IWB4 1347 aa27.58■■■□□ 2.01
SNX25-204ENST00000506896 LMO7Q8WWI1 1683 aa27.56■■■□□ 2
SNX25-204ENST00000506896 CAMTA1Q9Y6Y1 1673 aa27.56■■■□□ 2
SNX25-204ENST00000506896 MYOM1P52179 1685 aa27.54■■■□□ 2
SNX25-204ENST00000506896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.54■■■□□ 2
SNX25-204ENST00000506896 FAM98CQ17RN3 349 aaKnown RBP27.52■■■□□ 2
SNX25-204ENST00000506896 POLR3GLQ9BT43 218 aa27.52■■■□□ 2
SNX25-204ENST00000506896 USP31Q70CQ4 1352 aa27.51■■□□□ 1.99
SNX25-204ENST00000506896 SPATA31A1Q5TZJ5 1347 aa27.51■■□□□ 1.99
SNX25-204ENST00000506896 STRN4Q9NRL3 753 aa27.51■■□□□ 1.99
SNX25-204ENST00000506896 NME9Q86XW9 330 aa27.49■■□□□ 1.99
SNX25-204ENST00000506896 KCNH5Q8NCM2 988 aa27.49■■□□□ 1.99
SNX25-204ENST00000506896 COL18A1P39060 1754 aa27.49■■□□□ 1.99
SNX25-204ENST00000506896 AATKQ6ZMQ8 1374 aa27.48■■□□□ 1.99
SNX25-204ENST00000506896 EVA1CP58658 441 aa27.48■■□□□ 1.99
SNX25-204ENST00000506896 USP54Q70EL1 1684 aa27.48■■□□□ 1.99
SNX25-204ENST00000506896 C11orf95C9JLR9 678 aaPredicted RBP27.47■■□□□ 1.99
SNX25-204ENST00000506896 KRT27Q7Z3Y8 459 aa27.47■■□□□ 1.99
SNX25-204ENST00000506896 ARHGEF25Q86VW2 580 aa27.47■■□□□ 1.99
SNX25-204ENST00000506896 ZRANB1Q9UGI0 708 aa27.47■■□□□ 1.99
SNX25-204ENST00000506896 ZEB1P37275 1124 aaPredicted RBP27.46■■□□□ 1.99
SNX25-204ENST00000506896 LARP1Q6PKG0 1096 aaKnown RBP27.46■■□□□ 1.99
SNX25-204ENST00000506896 THSD7AQ9UPZ6 1657 aa27.46■■□□□ 1.99
SNX25-204ENST00000506896 CCDC125Q86Z20 511 aa27.45■■□□□ 1.98
SNX25-204ENST00000506896 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
SNX25-204ENST00000506896 KIF7Q2M1P5 1343 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms