RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 XRN1Q8IZH2 1706 aaKnown RBP8.15□□□□□ -1.1
USP46-206ENST00000506707 MSH6P52701 1360 aa8.15□□□□□ -1.1
USP46-206ENST00000506707 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
USP46-206ENST00000506707 SLAIN2Q9P270 581 aa8.15□□□□□ -1.1
USP46-206ENST00000506707 ROCK2O75116 1388 aaKnown RBP8.14□□□□□ -1.11
USP46-206ENST00000506707 GPRASP1Q5JY77 1395 aa8.14□□□□□ -1.11
USP46-206ENST00000506707 ATF3P18847 181 aa8.14□□□□□ -1.11
USP46-206ENST00000506707 SAFB2Q14151 953 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP46-206ENST00000506707 CADPS2Q86UW7 1296 aa8.14□□□□□ -1.11
USP46-206ENST00000506707 SPNS2Q8IVW8 549 aa8.14□□□□□ -1.11
USP46-206ENST00000506707 POGKQ9P215 609 aa8.14□□□□□ -1.11
USP46-206ENST00000506707 PIP4K2BP78356 416 aa8.13□□□□□ -1.11
USP46-206ENST00000506707 TMEM106CQ9BVX2 250 aa8.13□□□□□ -1.11
USP46-206ENST00000506707 CARD11Q9BXL7 1154 aa8.13□□□□□ -1.11
USP46-206ENST00000506707 ZBTB47Q9UFB7 747 aaPredicted RBP8.13□□□□□ -1.11
USP46-206ENST00000506707 LAMC1P11047 1609 aa8.13□□□□□ -1.11
USP46-206ENST00000506707 DLC1Q96QB1 1528 aa8.13□□□□□ -1.11
USP46-206ENST00000506707 ADGRL3Q9HAR2 1447 aa8.12□□□□□ -1.11
USP46-206ENST00000506707 SNPHO15079 494 aa8.12□□□□□ -1.11
USP46-206ENST00000506707 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
USP46-206ENST00000506707 IFNL1Q8IU54 200 aa8.12□□□□□ -1.11
USP46-206ENST00000506707 XIRP1Q702N8 1843 aaKnown RBP8.12□□□□□ -1.11
USP46-206ENST00000506707 MINK1Q8N4C8 1332 aaPredicted RBP8.11□□□□□ -1.11
USP46-206ENST00000506707 IRX5P78411 483 aaPredicted RBP8.11□□□□□ -1.11
USP46-206ENST00000506707 HIRIP3Q9BW71 556 aaPredicted RBP8.11□□□□□ -1.11
USP46-206ENST00000506707 KIAA1210Q9ULL0 1709 aa8.11□□□□□ -1.11
USP46-206ENST00000506707 RALGAPBQ86X10 1494 aa8.11□□□□□ -1.11
USP46-206ENST00000506707 DCCP43146 1447 aa8.11□□□□□ -1.11
USP46-206ENST00000506707 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
USP46-206ENST00000506707 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
USP46-206ENST00000506707 WASLO00401 505 aaPredicted RBP8.1□□□□□ -1.11
USP46-206ENST00000506707 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
USP46-206ENST00000506707 ORAI2Q96SN7 254 aa8.1□□□□□ -1.11
USP46-206ENST00000506707 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.09□□□□□ -1.11
USP46-206ENST00000506707 NUTM2FA1L443 756 aa8.09□□□□□ -1.11
USP46-206ENST00000506707 BRINP3Q76B58 766 aa8.09□□□□□ -1.11
USP46-206ENST00000506707 MST1RQ04912 1400 aa8.09□□□□□ -1.11
USP46-206ENST00000506707 KNDC1Q76NI1 1749 aa8.09□□□□□ -1.11
USP46-206ENST00000506707 C1orf167Q5SNV9 1468 aa8.08□□□□□ -1.12
USP46-206ENST00000506707 ST20-MTHFSA0A0A6YYL1 179 aa8.08□□□□□ -1.12
USP46-206ENST00000506707 NUBP1P53384 320 aa8.08□□□□□ -1.12
USP46-206ENST00000506707 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
USP46-206ENST00000506707 TESK2Q96S53 571 aa8.08□□□□□ -1.12
USP46-206ENST00000506707 CDK19Q9BWU1 502 aa8.08□□□□□ -1.12
USP46-206ENST00000506707 HSPA1LP34931 641 aa8.07□□□□□ -1.12
USP46-206ENST00000506707 ESCO1Q5FWF5 840 aa8.07□□□□□ -1.12
USP46-206ENST00000506707 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.07□□□□□ -1.12
USP46-206ENST00000506707 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
USP46-206ENST00000506707 DDX17Q92841 729 aaKnown RBP8.06□□□□□ -1.12
USP46-206ENST00000506707 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
USP46-206ENST00000506707 OCEL1Q9H607 264 aa8.06□□□□□ -1.12
USP46-206ENST00000506707 CABP2Q9NPB3 220 aa8.06□□□□□ -1.12
USP46-206ENST00000506707 EIF3AQ14152 1382 aaKnown RBP8.06□□□□□ -1.12
USP46-206ENST00000506707 NALCNQ8IZF0 1738 aa8.06□□□□□ -1.12
USP46-206ENST00000506707 CDC42BPGQ6DT37 1551 aa8.05□□□□□ -1.12
USP46-206ENST00000506707 FOXO3O43524 673 aa8.05□□□□□ -1.12
USP46-206ENST00000506707 ARHGEF28Q8N1W1 1705 aaKnown RBP8.05□□□□□ -1.12
USP46-206ENST00000506707 USP47Q96K76 1375 aa8.05□□□□□ -1.12
USP46-206ENST00000506707 SBNO2Q9Y2G9 1366 aa8.05□□□□□ -1.12
USP46-206ENST00000506707 EVC2Q86UK5 1308 aa8.04□□□□□ -1.12
USP46-206ENST00000506707 HSPA5P11021 654 aaKnown RBP8.04□□□□□ -1.12
USP46-206ENST00000506707 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
USP46-206ENST00000506707 SRPK2P78362 688 aaKnown RBP8.04□□□□□ -1.12
USP46-206ENST00000506707 PMFBP1Q8TBY8 1022 aa8.04□□□□□ -1.12
USP46-206ENST00000506707 MARVELD3Q96A59 401 aa8.04□□□□□ -1.12
USP46-206ENST00000506707 PHF8Q9UPP1 1060 aa8.04□□□□□ -1.12
USP46-206ENST00000506707 ANKARQ7Z5J8 1434 aa8.03□□□□□ -1.12
USP46-206ENST00000506707 ADGRB2O60241 1585 aa8.03□□□□□ -1.12
USP46-206ENST00000506707 PLEKHG3A1L390 1219 aa8.03□□□□□ -1.12
USP46-206ENST00000506707 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
USP46-206ENST00000506707 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
USP46-206ENST00000506707 SOS2Q07890 1332 aaPredicted RBP8.03□□□□□ -1.12
USP46-206ENST00000506707 CABP1Q9NZU7 370 aa8.02□□□□□ -1.13
USP46-206ENST00000506707 TULP4Q9NRJ4 1543 aa8.02□□□□□ -1.13
USP46-206ENST00000506707 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
USP46-206ENST00000506707 ROBO1Q9Y6N7 1651 aa8.02□□□□□ -1.13
USP46-206ENST00000506707 ATP7BP35670 1465 aa8.01□□□□□ -1.13
USP46-206ENST00000506707 TMF1P82094 1093 aa8.01□□□□□ -1.13
USP46-206ENST00000506707 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
USP46-206ENST00000506707 PSME1Q06323 249 aa8.01□□□□□ -1.13
USP46-206ENST00000506707 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
USP46-206ENST00000506707 LRRC59Q96AG4 307 aaKnown RBP8.01□□□□□ -1.13
USP46-206ENST00000506707 ACEP12821 1306 aa8.01□□□□□ -1.13
USP46-206ENST00000506707 FMN2Q9NZ56 1722 aa8□□□□□ -1.13
USP46-206ENST00000506707 DISP3Q9P2K9 1392 aa8□□□□□ -1.13
USP46-206ENST00000506707 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
USP46-206ENST00000506707 NGDNQ8NEJ9 315 aaKnown RBP8□□□□□ -1.13
USP46-206ENST00000506707 SLC12A5Q9H2X9 1139 aa8□□□□□ -1.13
USP46-206ENST00000506707 USP32Q8NFA0 1604 aa8□□□□□ -1.13
USP46-206ENST00000506707 POLR3AO14802 1390 aaPredicted RBP7.99□□□□□ -1.13
USP46-206ENST00000506707 QRICH2Q9H0J4 1663 aa7.99□□□□□ -1.13
USP46-206ENST00000506707 ZEB1P37275 1124 aaPredicted RBP7.99□□□□□ -1.13
USP46-206ENST00000506707 EMP3P54852 163 aa7.99□□□□□ -1.13
USP46-206ENST00000506707 AHDC1Q5TGY3 1603 aaPredicted RBP7.99□□□□□ -1.13
USP46-206ENST00000506707 ATAD2Q6PL18 1390 aa7.98□□□□□ -1.13
USP46-206ENST00000506707 PPIP5K1Q6PFW1 1433 aa7.98□□□□□ -1.13
USP46-206ENST00000506707 CDCA8Q53HL2 280 aa7.98□□□□□ -1.13
USP46-206ENST00000506707 PXDNQ92626 1479 aa7.98□□□□□ -1.13
USP46-206ENST00000506707 SPATA31A3Q5VYP0 1347 aa7.98□□□□□ -1.13
USP46-206ENST00000506707 C3orf67Q6ZVT6 689 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms