RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
PDLIM5-209ENST00000506632 NWD2Q9ULI1 1742 aa13.04□□□□□ -0.32
PDLIM5-209ENST00000506632 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
PDLIM5-209ENST00000506632 ROCK2O75116 1388 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-209ENST00000506632 GLI3P10071 1580 aa13.03□□□□□ -0.32
PDLIM5-209ENST00000506632 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-209ENST00000506632 ACEP12821 1306 aa13.02□□□□□ -0.33
PDLIM5-209ENST00000506632 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-209ENST00000506632 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
PDLIM5-209ENST00000506632 COL14A1Q05707 1796 aaKnown RBP13□□□□□ -0.33
PDLIM5-209ENST00000506632 NRAPQ86VF7 1730 aa13□□□□□ -0.33
PDLIM5-209ENST00000506632 PPIP5K1Q6PFW1 1433 aa13□□□□□ -0.33
PDLIM5-209ENST00000506632 FAM83GA6ND36 823 aa13□□□□□ -0.33
PDLIM5-209ENST00000506632 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
PDLIM5-209ENST00000506632 CABP2Q9NPB3 220 aa13□□□□□ -0.33
PDLIM5-209ENST00000506632 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-209ENST00000506632 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-209ENST00000506632 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
PDLIM5-209ENST00000506632 VPS72Q15906 364 aa12.99□□□□□ -0.33
PDLIM5-209ENST00000506632 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-209ENST00000506632 TONSLQ96HA7 1378 aa12.98□□□□□ -0.33
PDLIM5-209ENST00000506632 SBNO2Q9Y2G9 1366 aa12.98□□□□□ -0.33
PDLIM5-209ENST00000506632 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
PDLIM5-209ENST00000506632 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
PDLIM5-209ENST00000506632 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-209ENST00000506632 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
PDLIM5-209ENST00000506632 USP19O94966 1318 aa12.96□□□□□ -0.33
PDLIM5-209ENST00000506632 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-209ENST00000506632 USP6P35125 1406 aa12.96□□□□□ -0.34
PDLIM5-209ENST00000506632 NRKQ7Z2Y5 1582 aa12.95□□□□□ -0.34
PDLIM5-209ENST00000506632 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-209ENST00000506632 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
PDLIM5-209ENST00000506632 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
PDLIM5-209ENST00000506632 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
PDLIM5-209ENST00000506632 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
PDLIM5-209ENST00000506632 BRWD3Q6RI45 1802 aa12.93□□□□□ -0.34
PDLIM5-209ENST00000506632 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
PDLIM5-209ENST00000506632 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
PDLIM5-209ENST00000506632 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
PDLIM5-209ENST00000506632 CPDO75976 1380 aa12.93□□□□□ -0.34
PDLIM5-209ENST00000506632 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
PDLIM5-209ENST00000506632 CPSF1Q10570 1443 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-209ENST00000506632 SEPT12Q8IYM1 358 aa12.92□□□□□ -0.34
PDLIM5-209ENST00000506632 LMO7Q8WWI1 1683 aa12.92□□□□□ -0.34
PDLIM5-209ENST00000506632 SPATA31A5Q5VU36 1347 aa12.91□□□□□ -0.34
PDLIM5-209ENST00000506632 SPATA31A7Q8IWB4 1347 aa12.91□□□□□ -0.34
PDLIM5-209ENST00000506632 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
PDLIM5-209ENST00000506632 PIK3C2AO00443 1686 aa12.91□□□□□ -0.34
PDLIM5-209ENST00000506632 SLIT3O75094 1523 aa12.91□□□□□ -0.34
PDLIM5-209ENST00000506632 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-209ENST00000506632 CHRNA2Q15822 529 aa12.9□□□□□ -0.34
PDLIM5-209ENST00000506632 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-209ENST00000506632 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
PDLIM5-209ENST00000506632 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
PDLIM5-209ENST00000506632 GCP02774 474 aa12.89□□□□□ -0.35
PDLIM5-209ENST00000506632 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-209ENST00000506632 MON2Q7Z3U7 1717 aa12.88□□□□□ -0.35
PDLIM5-209ENST00000506632 CD163L1Q9NR16 1453 aa12.88□□□□□ -0.35
PDLIM5-209ENST00000506632 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
PDLIM5-209ENST00000506632 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
PDLIM5-209ENST00000506632 NLRP6P59044 892 aa12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 TESK2Q96S53 571 aa12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 CLSPNQ9HAW4 1339 aa12.87□□□□□ -0.35
PDLIM5-209ENST00000506632 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
PDLIM5-209ENST00000506632 EP400Q96L91 3159 aa12.86□□□□□ -0.35
PDLIM5-209ENST00000506632 BLMP54132 1417 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-209ENST00000506632 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-209ENST00000506632 COL18A1P39060 1754 aa12.85□□□□□ -0.35
PDLIM5-209ENST00000506632 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
PDLIM5-209ENST00000506632 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-209ENST00000506632 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
PDLIM5-209ENST00000506632 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
PDLIM5-209ENST00000506632 ZBTB22O15209 634 aa12.84□□□□□ -0.35
PDLIM5-209ENST00000506632 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
PDLIM5-209ENST00000506632 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
PDLIM5-209ENST00000506632 NFAT5O94916 1531 aa12.83□□□□□ -0.35
PDLIM5-209ENST00000506632 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
PDLIM5-209ENST00000506632 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-209ENST00000506632 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
PDLIM5-209ENST00000506632 SLC12A5Q9H2X9 1139 aa12.82□□□□□ -0.36
PDLIM5-209ENST00000506632 USP47Q96K76 1375 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 A0A0G2JS52 829 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 EVA1CP58658 441 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 MYT1Q01538 1121 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
PDLIM5-209ENST00000506632 CRB1P82279 1406 aa12.8□□□□□ -0.36
PDLIM5-209ENST00000506632 ABCC6O95255 1503 aa12.8□□□□□ -0.36
PDLIM5-209ENST00000506632 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
PDLIM5-209ENST00000506632 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
PDLIM5-209ENST00000506632 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-209ENST00000506632 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms