RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
DSP-203ENST00000506617 PLEKHG5O94827 1062 aa20.69■□□□□ 0.9
DSP-203ENST00000506617 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
DSP-203ENST00000506617 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
DSP-203ENST00000506617 POTEAQ6S8J7 498 aa20.68■□□□□ 0.9
DSP-203ENST00000506617 AFF2P51816 1311 aa20.68■□□□□ 0.9
DSP-203ENST00000506617 PHRF1Q9P1Y6 1649 aaKnown RBP20.67■□□□□ 0.9
DSP-203ENST00000506617 CABLES1Q8TDN4 633 aa20.67■□□□□ 0.9
DSP-203ENST00000506617 USP6P35125 1406 aa20.67■□□□□ 0.9
DSP-203ENST00000506617 MON2Q7Z3U7 1717 aa20.67■□□□□ 0.9
DSP-203ENST00000506617 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
DSP-203ENST00000506617 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
DSP-203ENST00000506617 HAP1P54257 671 aaPredicted RBP20.65■□□□□ 0.9
DSP-203ENST00000506617 TMF1P82094 1093 aa20.65■□□□□ 0.9
DSP-203ENST00000506617 ZNF772Q68DY9 489 aaPredicted RBP20.65■□□□□ 0.9
DSP-203ENST00000506617 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
DSP-203ENST00000506617 PLCH1Q4KWH8 1693 aa20.64■□□□□ 0.89
DSP-203ENST00000506617 PIK3C2AO00443 1686 aa20.63■□□□□ 0.89
DSP-203ENST00000506617 BRD4O60885 1362 aaPredicted RBP20.62■□□□□ 0.89
DSP-203ENST00000506617 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.62■□□□□ 0.89
DSP-203ENST00000506617 CPSF1Q10570 1443 aaKnown RBP20.61■□□□□ 0.89
DSP-203ENST00000506617 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
DSP-203ENST00000506617 CD163L1Q9NR16 1453 aa20.61■□□□□ 0.89
DSP-203ENST00000506617 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
DSP-203ENST00000506617 NWD2Q9ULI1 1742 aa20.59■□□□□ 0.89
DSP-203ENST00000506617 FNBP4Q8N3X1 1017 aaPredicted RBP20.59■□□□□ 0.89
DSP-203ENST00000506617 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
DSP-203ENST00000506617 SLIT2O94813 1529 aa20.58■□□□□ 0.89
DSP-203ENST00000506617 ABTB2Q8N961 1025 aa20.58■□□□□ 0.89
DSP-203ENST00000506617 USP21Q9UK80 565 aa20.58■□□□□ 0.89
DSP-203ENST00000506617 KTN1Q86UP2 1357 aaKnown RBP20.58■□□□□ 0.88
DSP-203ENST00000506617 COL14A1Q05707 1796 aaKnown RBP20.57■□□□□ 0.88
DSP-203ENST00000506617 ZNF692Q9BU19 519 aaPredicted RBP20.57■□□□□ 0.88
DSP-203ENST00000506617 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
DSP-203ENST00000506617 MYOM1P52179 1685 aa20.57■□□□□ 0.88
DSP-203ENST00000506617 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
DSP-203ENST00000506617 NINLQ9Y2I6 1382 aa20.56■□□□□ 0.88
DSP-203ENST00000506617 NRAPQ86VF7 1730 aa20.56■□□□□ 0.88
DSP-203ENST00000506617 USP19O94966 1318 aa20.55■□□□□ 0.88
DSP-203ENST00000506617 TTC21BQ7Z4L5 1316 aa20.55■□□□□ 0.88
DSP-203ENST00000506617 A0A1W2PP64 1363 aa20.55■□□□□ 0.88
DSP-203ENST00000506617 ATRNO75882 1429 aa20.54■□□□□ 0.88
DSP-203ENST00000506617 SLIT3O75094 1523 aa20.53■□□□□ 0.88
DSP-203ENST00000506617 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
DSP-203ENST00000506617 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
DSP-203ENST00000506617 QTRT2Q9H974 415 aaKnown RBP20.53■□□□□ 0.88
DSP-203ENST00000506617 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
DSP-203ENST00000506617 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
DSP-203ENST00000506617 TRPC5Q9UL62 973 aaPredicted RBP20.52■□□□□ 0.88
DSP-203ENST00000506617 KIAA0232Q92628 1395 aa20.51■□□□□ 0.87
DSP-203ENST00000506617 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
DSP-203ENST00000506617 RXRBP28702 533 aa20.51■□□□□ 0.87
DSP-203ENST00000506617 EDC4Q6P2E9 1401 aaKnown RBP20.51■□□□□ 0.87
DSP-203ENST00000506617 NLRP6P59044 892 aa20.5■□□□□ 0.87
DSP-203ENST00000506617 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
DSP-203ENST00000506617 CDK12Q9NYV4 1490 aaPredicted RBP20.5■□□□□ 0.87
DSP-203ENST00000506617 RBM6P78332 1123 aaKnown RBP20.49■□□□□ 0.87
DSP-203ENST00000506617 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
DSP-203ENST00000506617 PRDM11Q9NQV5 511 aa20.49■□□□□ 0.87
DSP-203ENST00000506617 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
DSP-203ENST00000506617 GLI3P10071 1580 aa20.48■□□□□ 0.87
DSP-203ENST00000506617 RGS12O14924 1447 aa20.48■□□□□ 0.87
DSP-203ENST00000506617 C11orf95C9JLR9 678 aaPredicted RBP20.48■□□□□ 0.87
DSP-203ENST00000506617 SOCS7O14512 581 aa20.48■□□□□ 0.87
DSP-203ENST00000506617 ZC3H6P61129 1189 aaKnown RBP20.48■□□□□ 0.87
DSP-203ENST00000506617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.87
DSP-203ENST00000506617 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
DSP-203ENST00000506617 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
DSP-203ENST00000506617 GCP02774 474 aa20.46■□□□□ 0.87
DSP-203ENST00000506617 CHRNA2Q15822 529 aa20.46■□□□□ 0.87
DSP-203ENST00000506617 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
DSP-203ENST00000506617 CPDO75976 1380 aa20.46■□□□□ 0.87
DSP-203ENST00000506617 CCDC7Q96M83 1385 aa20.46■□□□□ 0.87
DSP-203ENST00000506617 NME9Q86XW9 330 aa20.45■□□□□ 0.86
DSP-203ENST00000506617 NFAT5O94916 1531 aa20.44■□□□□ 0.86
DSP-203ENST00000506617 ZRANB1Q9UGI0 708 aa20.44■□□□□ 0.86
DSP-203ENST00000506617 WASHC2AQ641Q2 1341 aa20.44■□□□□ 0.86
DSP-203ENST00000506617 USP31Q70CQ4 1352 aa20.44■□□□□ 0.86
DSP-203ENST00000506617 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
DSP-203ENST00000506617 GJD4Q96KN9 370 aaPredicted RBP20.43■□□□□ 0.86
DSP-203ENST00000506617 COL18A1P39060 1754 aa20.42■□□□□ 0.86
DSP-203ENST00000506617 VPS72Q15906 364 aa20.42■□□□□ 0.86
DSP-203ENST00000506617 OVOS2A0A0J9YW53 1432 aa20.42■□□□□ 0.86
DSP-203ENST00000506617 OVOS2Q6IE36 1432 aa20.42■□□□□ 0.86
DSP-203ENST00000506617 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
DSP-203ENST00000506617 LTN1O94822 1766 aa20.41■□□□□ 0.86
DSP-203ENST00000506617 ZNF316A6NFI3 1004 aaPredicted RBP20.41■□□□□ 0.86
DSP-203ENST00000506617 POLR3GLQ9BT43 218 aa20.41■□□□□ 0.86
DSP-203ENST00000506617 RGPD5Q99666 1765 aa20.41■□□□□ 0.86
DSP-203ENST00000506617 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
DSP-203ENST00000506617 SOX12O15370 315 aa20.4■□□□□ 0.86
DSP-203ENST00000506617 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
DSP-203ENST00000506617 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
DSP-203ENST00000506617 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
DSP-203ENST00000506617 STRN4Q9NRL3 753 aa20.37■□□□□ 0.85
DSP-203ENST00000506617 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
DSP-203ENST00000506617 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
DSP-203ENST00000506617 AATKQ6ZMQ8 1374 aa20.35■□□□□ 0.85
DSP-203ENST00000506617 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
DSP-203ENST00000506617 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms