RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 SMPD1P17405 629 aa9.89□□□□□ -0.83
TRIO-208ENST00000506611 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
TRIO-208ENST00000506611 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
TRIO-208ENST00000506611 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIO-208ENST00000506611 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
TRIO-208ENST00000506611 SNIP1Q8TAD8 396 aaKnown RBP9.88□□□□□ -0.83
TRIO-208ENST00000506611 TSC1Q92574 1164 aa9.88□□□□□ -0.83
TRIO-208ENST00000506611 SIAH2O43255 324 aa9.87□□□□□ -0.83
TRIO-208ENST00000506611 AVPP01185 164 aa9.87□□□□□ -0.83
TRIO-208ENST00000506611 TTC24A2A3L6 582 aaPredicted RBP9.86□□□□□ -0.83
TRIO-208ENST00000506611 CTHP32929 405 aa9.86□□□□□ -0.83
TRIO-208ENST00000506611 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
TRIO-208ENST00000506611 ZNF511Q8NB15 262 aa9.86□□□□□ -0.83
TRIO-208ENST00000506611 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
TRIO-208ENST00000506611 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
TRIO-208ENST00000506611 POTECB2RU33 542 aa9.84□□□□□ -0.83
TRIO-208ENST00000506611 DACH1Q9UI36 760 aa9.84□□□□□ -0.83
TRIO-208ENST00000506611 CRIPAKQ8N1N5 446 aa9.83□□□□□ -0.84
TRIO-208ENST00000506611 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
TRIO-208ENST00000506611 PPP2R2DQ66LE6 453 aa9.82□□□□□ -0.84
TRIO-208ENST00000506611 HPS1Q92902 700 aa9.82□□□□□ -0.84
TRIO-208ENST00000506611 FOXJ1Q92949 421 aa9.82□□□□□ -0.84
TRIO-208ENST00000506611 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
TRIO-208ENST00000506611 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
TRIO-208ENST00000506611 HELBQ8NG08 1087 aaPredicted RBP9.81□□□□□ -0.84
TRIO-208ENST00000506611 LRRN4Q8WUT4 740 aa9.81□□□□□ -0.84
TRIO-208ENST00000506611 ALDH1A1P00352 501 aa9.8□□□□□ -0.84
TRIO-208ENST00000506611 TLL2Q9Y6L7 1015 aa9.8□□□□□ -0.84
TRIO-208ENST00000506611 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
TRIO-208ENST00000506611 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
TRIO-208ENST00000506611 ZNF787Q6DD87 383 aa9.78□□□□□ -0.84
TRIO-208ENST00000506611 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
TRIO-208ENST00000506611 CTC1Q2NKJ3 1217 aa9.76□□□□□ -0.85
TRIO-208ENST00000506611 AXIN1O15169 862 aa9.75□□□□□ -0.85
TRIO-208ENST00000506611 VARSP26640 1264 aaKnown RBP9.75□□□□□ -0.85
TRIO-208ENST00000506611 HMX1Q9NP08 348 aaPredicted RBP9.75□□□□□ -0.85
TRIO-208ENST00000506611 RFC5P40937 340 aa9.74□□□□□ -0.85
TRIO-208ENST00000506611 SH3BP5LQ7L8J4 393 aa9.74□□□□□ -0.85
TRIO-208ENST00000506611 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
TRIO-208ENST00000506611 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
TRIO-208ENST00000506611 AP1G2O75843 785 aa9.73□□□□□ -0.85
TRIO-208ENST00000506611 NR6A1Q15406 480 aa9.73□□□□□ -0.85
TRIO-208ENST00000506611 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
TRIO-208ENST00000506611 MPNDQ8N594 471 aa9.72□□□□□ -0.85
TRIO-208ENST00000506611 GMPR2Q9P2T1 348 aaKnown RBP9.72□□□□□ -0.85
TRIO-208ENST00000506611 USP17L8P0C7I0 530 aa9.71□□□□□ -0.86
TRIO-208ENST00000506611 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
TRIO-208ENST00000506611 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
TRIO-208ENST00000506611 PCMTD1Q96MG8 357 aaPredicted RBP9.7□□□□□ -0.86
TRIO-208ENST00000506611 CDK15Q96Q40 435 aa9.7□□□□□ -0.86
TRIO-208ENST00000506611 OCSTAMPQ9BR26 566 aa9.7□□□□□ -0.86
TRIO-208ENST00000506611 WASF2Q9Y6W5 498 aa9.7□□□□□ -0.86
TRIO-208ENST00000506611 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
TRIO-208ENST00000506611 ARMC2Q8NEN0 867 aa9.69□□□□□ -0.86
TRIO-208ENST00000506611 ATP13A2Q9NQ11 1180 aa9.69□□□□□ -0.86
TRIO-208ENST00000506611 GRM5P41594 1212 aa9.68□□□□□ -0.86
TRIO-208ENST00000506611 AGERQ15109 404 aa9.68□□□□□ -0.86
TRIO-208ENST00000506611 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
TRIO-208ENST00000506611 FKBPLQ9UIM3 349 aa9.68□□□□□ -0.86
TRIO-208ENST00000506611 ADH1CP00326 375 aa9.67□□□□□ -0.86
TRIO-208ENST00000506611 NR3C2P08235 984 aa9.67□□□□□ -0.86
TRIO-208ENST00000506611 NNTQ13423 1086 aa9.67□□□□□ -0.86
TRIO-208ENST00000506611 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
TRIO-208ENST00000506611 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
TRIO-208ENST00000506611 TRIM34Q9BYJ4 488 aa9.67□□□□□ -0.86
TRIO-208ENST00000506611 ARID5BQ14865 1188 aa9.66□□□□□ -0.86
TRIO-208ENST00000506611 MAGEB6P1A0A0J9YX57 407 aa9.65□□□□□ -0.86
TRIO-208ENST00000506611 BMP1P13497 986 aa9.65□□□□□ -0.86
TRIO-208ENST00000506611 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
TRIO-208ENST00000506611 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.86
TRIO-208ENST00000506611 CARD14Q9BXL6 1004 aa9.65□□□□□ -0.86
TRIO-208ENST00000506611 TIMP2P16035 220 aa9.64□□□□□ -0.87
TRIO-208ENST00000506611 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
TRIO-208ENST00000506611 PDXDC2PQ6P474 469 aa9.64□□□□□ -0.87
TRIO-208ENST00000506611 TRMT44Q8IYL2 757 aaKnown RBP9.64□□□□□ -0.87
TRIO-208ENST00000506611 CAPN5O15484 640 aaPredicted RBP9.63□□□□□ -0.87
TRIO-208ENST00000506611 SNRPBP14678 240 aaKnown RBP9.63□□□□□ -0.87
TRIO-208ENST00000506611 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
TRIO-208ENST00000506611 C11orf95C9JLR9 678 aaPredicted RBP9.61□□□□□ -0.87
TRIO-208ENST00000506611 TMEM259Q4ZIN3 620 aa9.61□□□□□ -0.87
TRIO-208ENST00000506611 ARHGAP9Q9BRR9 750 aa9.61□□□□□ -0.87
TRIO-208ENST00000506611 MAP4K5Q9Y4K4 846 aa9.61□□□□□ -0.87
TRIO-208ENST00000506611 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
TRIO-208ENST00000506611 FSHRP23945 695 aa9.6□□□□□ -0.87
TRIO-208ENST00000506611 WDR4P57081 412 aaKnown RBP9.6□□□□□ -0.87
TRIO-208ENST00000506611 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
TRIO-208ENST00000506611 TRIM47Q96LD4 638 aa9.6□□□□□ -0.87
TRIO-208ENST00000506611 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
TRIO-208ENST00000506611 GPR37L1O60883 481 aa9.59□□□□□ -0.87
TRIO-208ENST00000506611 NR5A1Q13285 461 aa9.59□□□□□ -0.87
TRIO-208ENST00000506611 VASH1Q7L8A9 365 aaPredicted RBP9.58□□□□□ -0.88
TRIO-208ENST00000506611 ZIC2O95409 532 aaPredicted RBP9.57□□□□□ -0.88
TRIO-208ENST00000506611 MTMR14Q8NCE2 650 aa9.57□□□□□ -0.88
TRIO-208ENST00000506611 ADAM32Q8TC27 787 aa9.57□□□□□ -0.88
TRIO-208ENST00000506611 PTK2Q05397 1052 aa9.55□□□□□ -0.88
TRIO-208ENST00000506611 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
TRIO-208ENST00000506611 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
TRIO-208ENST00000506611 SNRKQ9NRH2 765 aa9.55□□□□□ -0.88
TRIO-208ENST00000506611 GPSM3Q9Y4H4 160 aa9.55□□□□□ -0.88
TRIO-208ENST00000506611 MRPL14Q6P1L8 145 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms