RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CD163L1Q9NR16 1453 aa25.65■■□□□ 1.7
PDLIM7-216ENST00000506537 NRKQ7Z2Y5 1582 aa25.65■■□□□ 1.7
PDLIM7-216ENST00000506537 CPSF1Q10570 1443 aaKnown RBP25.64■■□□□ 1.7
PDLIM7-216ENST00000506537 SSH2Q76I76 1423 aa25.64■■□□□ 1.7
PDLIM7-216ENST00000506537 PUS7Q96PZ0 661 aaKnown RBP25.64■■□□□ 1.7
PDLIM7-216ENST00000506537 MON2Q7Z3U7 1717 aa25.63■■□□□ 1.69
PDLIM7-216ENST00000506537 PLEKHG5O94827 1062 aa25.63■■□□□ 1.69
PDLIM7-216ENST00000506537 C8orf37Q96NL8 207 aa25.63■■□□□ 1.69
PDLIM7-216ENST00000506537 BRD4O60885 1362 aaPredicted RBP25.61■■□□□ 1.69
PDLIM7-216ENST00000506537 SLC24A1O60721 1099 aa25.61■■□□□ 1.69
PDLIM7-216ENST00000506537 PHRF1Q9P1Y6 1649 aaKnown RBP25.61■■□□□ 1.69
PDLIM7-216ENST00000506537 AFF2P51816 1311 aa25.61■■□□□ 1.69
PDLIM7-216ENST00000506537 TMF1P82094 1093 aa25.6■■□□□ 1.69
PDLIM7-216ENST00000506537 POTEAQ6S8J7 498 aa25.6■■□□□ 1.69
PDLIM7-216ENST00000506537 SLC12A5Q9H2X9 1139 aa25.6■■□□□ 1.69
PDLIM7-216ENST00000506537 PIK3C2AO00443 1686 aa25.59■■□□□ 1.69
PDLIM7-216ENST00000506537 HSPA5P11021 654 aaKnown RBP25.59■■□□□ 1.69
PDLIM7-216ENST00000506537 EIF4G2P78344 907 aaKnown RBP eCLIP25.58■■□□□ 1.69
PDLIM7-216ENST00000506537 NUTM2GQ5VZR2 741 aa25.58■■□□□ 1.69
PDLIM7-216ENST00000506537 TMC1Q8TDI8 760 aa25.58■■□□□ 1.69
PDLIM7-216ENST00000506537 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
PDLIM7-216ENST00000506537 NGLY1Q96IV0 654 aa25.56■■□□□ 1.68
PDLIM7-216ENST00000506537 ZNF692Q9BU19 519 aaPredicted RBP25.56■■□□□ 1.68
PDLIM7-216ENST00000506537 A0A1W2PP64 1363 aa25.56■■□□□ 1.68
PDLIM7-216ENST00000506537 NINLQ9Y2I6 1382 aa25.56■■□□□ 1.68
PDLIM7-216ENST00000506537 HAP1P54257 671 aaPredicted RBP25.55■■□□□ 1.68
PDLIM7-216ENST00000506537 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
PDLIM7-216ENST00000506537 MYOM1P52179 1685 aa25.55■■□□□ 1.68
PDLIM7-216ENST00000506537 ZNF772Q68DY9 489 aaPredicted RBP25.54■■□□□ 1.68
PDLIM7-216ENST00000506537 USP19O94966 1318 aa25.54■■□□□ 1.68
PDLIM7-216ENST00000506537 TTC21BQ7Z4L5 1316 aa25.54■■□□□ 1.68
PDLIM7-216ENST00000506537 PLCH1Q4KWH8 1693 aa25.53■■□□□ 1.68
PDLIM7-216ENST00000506537 FNBP4Q8N3X1 1017 aaPredicted RBP25.53■■□□□ 1.68
PDLIM7-216ENST00000506537 SLIT2O94813 1529 aa25.53■■□□□ 1.68
PDLIM7-216ENST00000506537 BCL9LQ86UU0 1499 aa25.51■■□□□ 1.67
PDLIM7-216ENST00000506537 HDGFL2Q7Z4V5 671 aaPredicted RBP25.5■■□□□ 1.67
PDLIM7-216ENST00000506537 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
PDLIM7-216ENST00000506537 SLIT3O75094 1523 aa25.49■■□□□ 1.67
PDLIM7-216ENST00000506537 EDC4Q6P2E9 1401 aaKnown RBP25.49■■□□□ 1.67
PDLIM7-216ENST00000506537 TTC21AQ8NDW8 1320 aa25.49■■□□□ 1.67
PDLIM7-216ENST00000506537 CDCA8Q53HL2 280 aa25.49■■□□□ 1.67
PDLIM7-216ENST00000506537 TERF2IPQ9NYB0 399 aa25.49■■□□□ 1.67
PDLIM7-216ENST00000506537 USP21Q9UK80 565 aa25.48■■□□□ 1.67
PDLIM7-216ENST00000506537 COL14A1Q05707 1796 aaKnown RBP25.48■■□□□ 1.67
PDLIM7-216ENST00000506537 ANKRD36BQ8N2N9 1353 aa25.47■■□□□ 1.67
PDLIM7-216ENST00000506537 NWD2Q9ULI1 1742 aa25.47■■□□□ 1.67
PDLIM7-216ENST00000506537 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
PDLIM7-216ENST00000506537 USP54Q70EL1 1684 aa25.47■■□□□ 1.67
PDLIM7-216ENST00000506537 FAM83GA6ND36 823 aa25.46■■□□□ 1.67
PDLIM7-216ENST00000506537 NLRP6P59044 892 aa25.46■■□□□ 1.67
PDLIM7-216ENST00000506537 ATRNO75882 1429 aa25.46■■□□□ 1.67
PDLIM7-216ENST00000506537 KIAA0232Q92628 1395 aa25.45■■□□□ 1.67
PDLIM7-216ENST00000506537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.45■■□□□ 1.66
PDLIM7-216ENST00000506537 NRAPQ86VF7 1730 aa25.45■■□□□ 1.66
PDLIM7-216ENST00000506537 QTRT2Q9H974 415 aaKnown RBP25.43■■□□□ 1.66
PDLIM7-216ENST00000506537 ZRANB1Q9UGI0 708 aa25.43■■□□□ 1.66
PDLIM7-216ENST00000506537 C11orf95C9JLR9 678 aaPredicted RBP25.42■■□□□ 1.66
PDLIM7-216ENST00000506537 NME9Q86XW9 330 aa25.42■■□□□ 1.66
PDLIM7-216ENST00000506537 GCP02774 474 aa25.41■■□□□ 1.66
PDLIM7-216ENST00000506537 ZC3H6P61129 1189 aaKnown RBP25.41■■□□□ 1.66
PDLIM7-216ENST00000506537 PRDM11Q9NQV5 511 aa25.41■■□□□ 1.66
PDLIM7-216ENST00000506537 CPDO75976 1380 aa25.41■■□□□ 1.66
PDLIM7-216ENST00000506537 USP31Q70CQ4 1352 aa25.41■■□□□ 1.66
PDLIM7-216ENST00000506537 UNC5CLQ8IV45 518 aa25.4■■□□□ 1.66
PDLIM7-216ENST00000506537 TRPC5Q9UL62 973 aaPredicted RBP25.4■■□□□ 1.66
PDLIM7-216ENST00000506537 LMO7Q8WWI1 1683 aa25.39■■□□□ 1.66
PDLIM7-216ENST00000506537 NFAT5O94916 1531 aa25.39■■□□□ 1.66
PDLIM7-216ENST00000506537 CHRNA2Q15822 529 aa25.39■■□□□ 1.66
PDLIM7-216ENST00000506537 OVOS2A0A0J9YW53 1432 aa25.38■■□□□ 1.65
PDLIM7-216ENST00000506537 OVOS2Q6IE36 1432 aa25.38■■□□□ 1.65
PDLIM7-216ENST00000506537 RXRBP28702 533 aa25.37■■□□□ 1.65
PDLIM7-216ENST00000506537 POLR3GLQ9BT43 218 aa25.37■■□□□ 1.65
PDLIM7-216ENST00000506537 BTG4Q9NY30 223 aa25.37■■□□□ 1.65
PDLIM7-216ENST00000506537 GLI3P10071 1580 aa25.36■■□□□ 1.65
PDLIM7-216ENST00000506537 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
PDLIM7-216ENST00000506537 CDK12Q9NYV4 1490 aaPredicted RBP25.35■■□□□ 1.65
PDLIM7-216ENST00000506537 CAMTA1Q9Y6Y1 1673 aa25.34■■□□□ 1.65
PDLIM7-216ENST00000506537 CARD14Q9BXL6 1004 aa25.34■■□□□ 1.65
PDLIM7-216ENST00000506537 RGS12O14924 1447 aa25.34■■□□□ 1.65
PDLIM7-216ENST00000506537 NSD3Q9BZ95 1437 aa25.33■■□□□ 1.65
PDLIM7-216ENST00000506537 COL18A1P39060 1754 aa25.33■■□□□ 1.65
PDLIM7-216ENST00000506537 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.64
PDLIM7-216ENST00000506537 SOX12O15370 315 aa25.32■■□□□ 1.64
PDLIM7-216ENST00000506537 VPS72Q15906 364 aa25.32■■□□□ 1.64
PDLIM7-216ENST00000506537 KIF7Q2M1P5 1343 aa25.32■■□□□ 1.64
PDLIM7-216ENST00000506537 KCNH5Q8NCM2 988 aa25.31■■□□□ 1.64
PDLIM7-216ENST00000506537 GJD4Q96KN9 370 aaPredicted RBP25.31■■□□□ 1.64
PDLIM7-216ENST00000506537 ARHGEF25Q86VW2 580 aa25.29■■□□□ 1.64
PDLIM7-216ENST00000506537 AATKQ6ZMQ8 1374 aa25.29■■□□□ 1.64
PDLIM7-216ENST00000506537 ZBTB7CA1YPR0 619 aa25.28■■□□□ 1.64
PDLIM7-216ENST00000506537 LTN1O94822 1766 aa25.27■■□□□ 1.64
PDLIM7-216ENST00000506537 FYB1O15117 783 aa25.27■■□□□ 1.64
PDLIM7-216ENST00000506537 COL5A2P05997 1499 aaPredicted RBP25.27■■□□□ 1.64
PDLIM7-216ENST00000506537 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
PDLIM7-216ENST00000506537 RGPD5Q99666 1765 aa25.24■■□□□ 1.63
PDLIM7-216ENST00000506537 ABCC6O95255 1503 aa25.24■■□□□ 1.63
PDLIM7-216ENST00000506537 COG3Q96JB2 828 aa25.24■■□□□ 1.63
PDLIM7-216ENST00000506537 STRN4Q9NRL3 753 aa25.24■■□□□ 1.63
PDLIM7-216ENST00000506537 CCDC9Q9Y3X0 531 aaKnown RBP25.24■■□□□ 1.63
PDLIM7-216ENST00000506537 SPATA31A5Q5VU36 1347 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms