RNA–Protein interactions for RNA: ENST00000506489.1

CDK18-216, Transcript of cyclin dependent kinase 18, humanhuman

TSL 4

Gene CDK18, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-216ENST00000506489 UPF1Q92900 1129 aaKnown RBP eCLIP29.6■■■□□ 2.33
CDK18-216ENST00000506489 ACEP12821 1306 aa29.6■■■□□ 2.33
CDK18-216ENST00000506489 TONSLQ96HA7 1378 aa29.6■■■□□ 2.33
CDK18-216ENST00000506489 GJD4Q96KN9 370 aaPredicted RBP29.59■■■□□ 2.33
CDK18-216ENST00000506489 CABP2Q9NPB3 220 aa29.58■■■□□ 2.33
CDK18-216ENST00000506489 PLCH1Q4KWH8 1693 aa29.56■■■□□ 2.32
CDK18-216ENST00000506489 PPIP5K1Q6PFW1 1433 aa29.55■■■□□ 2.32
CDK18-216ENST00000506489 NWD2Q9ULI1 1742 aa29.54■■■□□ 2.32
CDK18-216ENST00000506489 FAM83GA6ND36 823 aa29.54■■■□□ 2.32
CDK18-216ENST00000506489 EVC2Q86UK5 1308 aa29.53■■■□□ 2.32
CDK18-216ENST00000506489 RALGAPBQ86X10 1494 aa29.52■■■□□ 2.32
CDK18-216ENST00000506489 CRYBG1Q9Y4K1 1723 aa29.51■■■□□ 2.32
CDK18-216ENST00000506489 VPS72Q15906 364 aa29.5■■■□□ 2.31
CDK18-216ENST00000506489 GLI3P10071 1580 aa29.49■■■□□ 2.31
CDK18-216ENST00000506489 ATAD2Q6PL18 1390 aa29.49■■■□□ 2.31
CDK18-216ENST00000506489 CARD11Q9BXL7 1154 aa29.48■■■□□ 2.31
CDK18-216ENST00000506489 CABP1Q9NZU7 370 aa29.48■■■□□ 2.31
CDK18-216ENST00000506489 COL14A1Q05707 1796 aaKnown RBP29.48■■■□□ 2.31
CDK18-216ENST00000506489 NUTM2GQ5VZR2 741 aa29.46■■■□□ 2.31
CDK18-216ENST00000506489 ABTB2Q8N961 1025 aa29.46■■■□□ 2.31
CDK18-216ENST00000506489 BTG4Q9NY30 223 aa29.46■■■□□ 2.31
CDK18-216ENST00000506489 CCDC9Q9Y3X0 531 aaKnown RBP29.46■■■□□ 2.31
CDK18-216ENST00000506489 PHRF1Q9P1Y6 1649 aaKnown RBP29.45■■■□□ 2.3
CDK18-216ENST00000506489 BRD4O60885 1362 aaPredicted RBP29.44■■■□□ 2.3
CDK18-216ENST00000506489 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
CDK18-216ENST00000506489 NRAPQ86VF7 1730 aa29.42■■■□□ 2.3
CDK18-216ENST00000506489 SBNO2Q9Y2G9 1366 aa29.41■■■□□ 2.3
CDK18-216ENST00000506489 KIAA0232Q92628 1395 aa29.4■■■□□ 2.3
CDK18-216ENST00000506489 USP6P35125 1406 aa29.4■■■□□ 2.3
CDK18-216ENST00000506489 NLRP13Q86W25 1043 aa29.39■■■□□ 2.3
CDK18-216ENST00000506489 ZC3H6P61129 1189 aaKnown RBP29.38■■■□□ 2.29
CDK18-216ENST00000506489 USP19O94966 1318 aa29.37■■■□□ 2.29
CDK18-216ENST00000506489 ONECUT3O60422 494 aaPredicted RBP29.36■■■□□ 2.29
CDK18-216ENST00000506489 SEPT12Q8IYM1 358 aa29.36■■■□□ 2.29
CDK18-216ENST00000506489 CHRNA2Q15822 529 aa29.35■■■□□ 2.29
CDK18-216ENST00000506489 NRKQ7Z2Y5 1582 aa29.35■■■□□ 2.29
CDK18-216ENST00000506489 ZNF692Q9BU19 519 aaPredicted RBP29.34■■■□□ 2.29
CDK18-216ENST00000506489 SSH2Q76I76 1423 aa29.32■■■□□ 2.28
CDK18-216ENST00000506489 BRWD3Q6RI45 1802 aa29.31■■■□□ 2.28
CDK18-216ENST00000506489 CPDO75976 1380 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 SPATA31A5Q5VU36 1347 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 SPATA31A7Q8IWB4 1347 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 A0A0G2JS52 829 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 GCP02774 474 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 NLRP6P59044 892 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 MYT1Q01538 1121 aa29.3■■■□□ 2.28
CDK18-216ENST00000506489 FAM98CQ17RN3 349 aaKnown RBP29.29■■■□□ 2.28
CDK18-216ENST00000506489 AKAP12Q02952 1782 aa29.29■■■□□ 2.28
CDK18-216ENST00000506489 CCDC125Q86Z20 511 aa29.28■■■□□ 2.28
CDK18-216ENST00000506489 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
CDK18-216ENST00000506489 STRN4Q9NRL3 753 aa29.27■■■□□ 2.28
CDK18-216ENST00000506489 CPSF1Q10570 1443 aaKnown RBP29.27■■■□□ 2.28
CDK18-216ENST00000506489 TTC21BQ7Z4L5 1316 aa29.26■■■□□ 2.27
CDK18-216ENST00000506489 KRT27Q7Z3Y8 459 aa29.26■■■□□ 2.27
CDK18-216ENST00000506489 PIK3C2AO00443 1686 aa29.25■■■□□ 2.27
CDK18-216ENST00000506489 KTN1Q86UP2 1357 aaKnown RBP29.25■■■□□ 2.27
CDK18-216ENST00000506489 EVA1CP58658 441 aa29.24■■■□□ 2.27
CDK18-216ENST00000506489 SLIT3O75094 1523 aa29.24■■■□□ 2.27
CDK18-216ENST00000506489 SPATA31A1Q5TZJ5 1347 aa29.23■■■□□ 2.27
CDK18-216ENST00000506489 TTC21AQ8NDW8 1320 aa29.23■■■□□ 2.27
CDK18-216ENST00000506489 EP400Q96L91 3159 aa29.23■■■□□ 2.27
CDK18-216ENST00000506489 CLSPNQ9HAW4 1339 aa29.22■■■□□ 2.27
CDK18-216ENST00000506489 LMO7Q8WWI1 1683 aa29.22■■■□□ 2.27
CDK18-216ENST00000506489 CAMTA1Q9Y6Y1 1673 aa29.22■■■□□ 2.27
CDK18-216ENST00000506489 ST20-MTHFSA0A0A6YYL1 179 aa29.21■■■□□ 2.27
CDK18-216ENST00000506489 TMC1Q8TDI8 760 aa29.21■■■□□ 2.27
CDK18-216ENST00000506489 PUS7Q96PZ0 661 aaKnown RBP29.21■■■□□ 2.27
CDK18-216ENST00000506489 SLC24A1O60721 1099 aa29.2■■■□□ 2.26
CDK18-216ENST00000506489 TIMELESSQ9UNS1 1208 aa29.2■■■□□ 2.26
CDK18-216ENST00000506489 TESK2Q96S53 571 aa29.19■■■□□ 2.26
CDK18-216ENST00000506489 MON2Q7Z3U7 1717 aa29.19■■■□□ 2.26
CDK18-216ENST00000506489 BLMP54132 1417 aaPredicted RBP29.19■■■□□ 2.26
CDK18-216ENST00000506489 ZBTB7CA1YPR0 619 aa29.18■■■□□ 2.26
CDK18-216ENST00000506489 THSD7AQ9UPZ6 1657 aa29.18■■■□□ 2.26
CDK18-216ENST00000506489 HDGFL2Q7Z4V5 671 aaPredicted RBP29.17■■■□□ 2.26
CDK18-216ENST00000506489 SLC12A5Q9H2X9 1139 aa29.17■■■□□ 2.26
CDK18-216ENST00000506489 LARP1Q6PKG0 1096 aaKnown RBP29.16■■■□□ 2.26
CDK18-216ENST00000506489 KCNH5Q8NCM2 988 aa29.16■■■□□ 2.26
CDK18-216ENST00000506489 CD163L1Q9NR16 1453 aa29.16■■■□□ 2.26
CDK18-216ENST00000506489 AATKQ6ZMQ8 1374 aa29.15■■■□□ 2.26
CDK18-216ENST00000506489 USP35Q9P2H5 1018 aa29.15■■■□□ 2.26
CDK18-216ENST00000506489 TERF2IPQ9NYB0 399 aa29.14■■■□□ 2.26
CDK18-216ENST00000506489 COL5A2P05997 1499 aaPredicted RBP29.14■■■□□ 2.26
CDK18-216ENST00000506489 SF3B2Q13435 895 aaKnown RBP29.13■■■□□ 2.25
CDK18-216ENST00000506489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.13■■■□□ 2.25
CDK18-216ENST00000506489 USP47Q96K76 1375 aa29.13■■■□□ 2.25
CDK18-216ENST00000506489 BARGINQ6ZT62 677 aa29.12■■■□□ 2.25
CDK18-216ENST00000506489 SOX12O15370 315 aa29.1■■■□□ 2.25
CDK18-216ENST00000506489 TCP11L2Q8N4U5 519 aa29.1■■■□□ 2.25
CDK18-216ENST00000506489 EDC4Q6P2E9 1401 aaKnown RBP29.1■■■□□ 2.25
CDK18-216ENST00000506489 ARHGEF25Q86VW2 580 aa29.09■■■□□ 2.25
CDK18-216ENST00000506489 USP31Q70CQ4 1352 aa29.09■■■□□ 2.25
CDK18-216ENST00000506489 NINLQ9Y2I6 1382 aa29.09■■■□□ 2.25
CDK18-216ENST00000506489 THRAP3Q9Y2W1 955 aaKnown RBP29.08■■■□□ 2.25
CDK18-216ENST00000506489 A0A1W2PP64 1363 aa29.08■■■□□ 2.25
CDK18-216ENST00000506489 COL18A1P39060 1754 aa29.07■■■□□ 2.24
CDK18-216ENST00000506489 CRB1P82279 1406 aa29.07■■■□□ 2.24
CDK18-216ENST00000506489 ZRANB1Q9UGI0 708 aa29.07■■■□□ 2.24
CDK18-216ENST00000506489 TMF1P82094 1093 aa29.06■■■□□ 2.24
CDK18-216ENST00000506489 FAM182BQ5T319 152 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms