RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ARHGEF10O15013 1369 aa24.14■■□□□ 1.45
PDLIM7-215ENST00000506161 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
PDLIM7-215ENST00000506161 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
PDLIM7-215ENST00000506161 EP400Q96L91 3159 aa24.12■■□□□ 1.45
PDLIM7-215ENST00000506161 NGDNQ8NEJ9 315 aaKnown RBP24.12■■□□□ 1.45
PDLIM7-215ENST00000506161 POLR3AO14802 1390 aaPredicted RBP24.11■■□□□ 1.45
PDLIM7-215ENST00000506161 CABP2Q9NPB3 220 aa24.1■■□□□ 1.45
PDLIM7-215ENST00000506161 RALGAPBQ86X10 1494 aa24.1■■□□□ 1.45
PDLIM7-215ENST00000506161 ACEP12821 1306 aa24.1■■□□□ 1.45
PDLIM7-215ENST00000506161 GJD4Q96KN9 370 aaPredicted RBP24.09■■□□□ 1.45
PDLIM7-215ENST00000506161 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.45
PDLIM7-215ENST00000506161 ROCK2O75116 1388 aaKnown RBP24.08■■□□□ 1.45
PDLIM7-215ENST00000506161 FAM83GA6ND36 823 aa24.08■■□□□ 1.45
PDLIM7-215ENST00000506161 UNC5CLQ8IV45 518 aa24.08■■□□□ 1.45
PDLIM7-215ENST00000506161 BLMP54132 1417 aaPredicted RBP24.07■■□□□ 1.44
PDLIM7-215ENST00000506161 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
PDLIM7-215ENST00000506161 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
PDLIM7-215ENST00000506161 PAK3O75914 559 aaPredicted RBP24.06■■□□□ 1.44
PDLIM7-215ENST00000506161 HAP1P54257 671 aaPredicted RBP24.06■■□□□ 1.44
PDLIM7-215ENST00000506161 CCDC61Q9Y6R9 512 aa24.06■■□□□ 1.44
PDLIM7-215ENST00000506161 NUTM2GQ5VZR2 741 aa24.05■■□□□ 1.44
PDLIM7-215ENST00000506161 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
PDLIM7-215ENST00000506161 AKAP12Q02952 1782 aa24.04■■□□□ 1.44
PDLIM7-215ENST00000506161 SRPK2P78362 688 aaKnown RBP24.04■■□□□ 1.44
PDLIM7-215ENST00000506161 DEFB132Q7Z7B7 95 aa24■■□□□ 1.43
PDLIM7-215ENST00000506161 PIK3C2AO00443 1686 aa23.99■■□□□ 1.43
PDLIM7-215ENST00000506161 SF3B2Q13435 895 aaKnown RBP23.99■■□□□ 1.43
PDLIM7-215ENST00000506161 VPS72Q15906 364 aa23.98■■□□□ 1.43
PDLIM7-215ENST00000506161 TONSLQ96HA7 1378 aa23.98■■□□□ 1.43
PDLIM7-215ENST00000506161 LRP5O75197 1615 aa23.98■■□□□ 1.43
PDLIM7-215ENST00000506161 BTG4Q9NY30 223 aa23.97■■□□□ 1.43
PDLIM7-215ENST00000506161 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
PDLIM7-215ENST00000506161 LMO7Q8WWI1 1683 aa23.96■■□□□ 1.43
PDLIM7-215ENST00000506161 USP6P35125 1406 aa23.96■■□□□ 1.43
PDLIM7-215ENST00000506161 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
PDLIM7-215ENST00000506161 SSH2Q76I76 1423 aa23.95■■□□□ 1.42
PDLIM7-215ENST00000506161 CHRNA2Q15822 529 aa23.95■■□□□ 1.42
PDLIM7-215ENST00000506161 MON2Q7Z3U7 1717 aa23.94■■□□□ 1.42
PDLIM7-215ENST00000506161 USP19O94966 1318 aa23.93■■□□□ 1.42
PDLIM7-215ENST00000506161 EVC2Q86UK5 1308 aa23.92■■□□□ 1.42
PDLIM7-215ENST00000506161 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
PDLIM7-215ENST00000506161 THSD7AQ9UPZ6 1657 aa23.92■■□□□ 1.42
PDLIM7-215ENST00000506161 CARD11Q9BXL7 1154 aa23.91■■□□□ 1.42
PDLIM7-215ENST00000506161 CAMTA1Q9Y6Y1 1673 aa23.91■■□□□ 1.42
PDLIM7-215ENST00000506161 SEPT12Q8IYM1 358 aa23.9■■□□□ 1.42
PDLIM7-215ENST00000506161 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
PDLIM7-215ENST00000506161 PRDM11Q9NQV5 511 aa23.9■■□□□ 1.42
PDLIM7-215ENST00000506161 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-215ENST00000506161 SLIT3O75094 1523 aa23.89■■□□□ 1.42
PDLIM7-215ENST00000506161 SBNO2Q9Y2G9 1366 aa23.89■■□□□ 1.41
PDLIM7-215ENST00000506161 COL18A1P39060 1754 aa23.88■■□□□ 1.41
PDLIM7-215ENST00000506161 RGPD5Q99666 1765 aa23.88■■□□□ 1.41
PDLIM7-215ENST00000506161 ONECUT3O60422 494 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-215ENST00000506161 CD163L1Q9NR16 1453 aa23.87■■□□□ 1.41
PDLIM7-215ENST00000506161 CPSF1Q10570 1443 aaKnown RBP23.87■■□□□ 1.41
PDLIM7-215ENST00000506161 SPATA31A5Q5VU36 1347 aa23.85■■□□□ 1.41
PDLIM7-215ENST00000506161 SPATA31A7Q8IWB4 1347 aa23.85■■□□□ 1.41
PDLIM7-215ENST00000506161 PSDA5PKW4 1024 aaPredicted RBP23.85■■□□□ 1.41
PDLIM7-215ENST00000506161 FAM98CQ17RN3 349 aaKnown RBP23.85■■□□□ 1.41
PDLIM7-215ENST00000506161 CPDO75976 1380 aa23.83■■□□□ 1.41
PDLIM7-215ENST00000506161 KRT27Q7Z3Y8 459 aa23.83■■□□□ 1.41
PDLIM7-215ENST00000506161 GCP02774 474 aa23.82■■□□□ 1.4
PDLIM7-215ENST00000506161 BAG6P46379 1132 aa23.82■■□□□ 1.4
PDLIM7-215ENST00000506161 STRN4Q9NRL3 753 aa23.82■■□□□ 1.4
PDLIM7-215ENST00000506161 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
PDLIM7-215ENST00000506161 USP54Q70EL1 1684 aa23.81■■□□□ 1.4
PDLIM7-215ENST00000506161 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
PDLIM7-215ENST00000506161 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
PDLIM7-215ENST00000506161 TESK2Q96S53 571 aa23.8■■□□□ 1.4
PDLIM7-215ENST00000506161 SPATA31A1Q5TZJ5 1347 aa23.8■■□□□ 1.4
PDLIM7-215ENST00000506161 NLRP6P59044 892 aa23.79■■□□□ 1.4
PDLIM7-215ENST00000506161 FAM182BQ5T319 152 aa23.79■■□□□ 1.4
PDLIM7-215ENST00000506161 COL5A2P05997 1499 aaPredicted RBP23.78■■□□□ 1.4
PDLIM7-215ENST00000506161 NFAT5O94916 1531 aa23.78■■□□□ 1.4
PDLIM7-215ENST00000506161 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
PDLIM7-215ENST00000506161 WNK3Q9BYP7 1800 aa23.77■■□□□ 1.4
PDLIM7-215ENST00000506161 KTN1Q86UP2 1357 aaKnown RBP23.77■■□□□ 1.4
PDLIM7-215ENST00000506161 TNS1Q9HBL0 1735 aaKnown RBP23.76■■□□□ 1.39
PDLIM7-215ENST00000506161 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
PDLIM7-215ENST00000506161 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
PDLIM7-215ENST00000506161 A0A0G2JS52 829 aa23.75■■□□□ 1.39
PDLIM7-215ENST00000506161 MYT1Q01538 1121 aa23.75■■□□□ 1.39
PDLIM7-215ENST00000506161 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
PDLIM7-215ENST00000506161 ZBTB7CA1YPR0 619 aa23.74■■□□□ 1.39
PDLIM7-215ENST00000506161 LTN1O94822 1766 aa23.73■■□□□ 1.39
PDLIM7-215ENST00000506161 USP35Q9P2H5 1018 aa23.73■■□□□ 1.39
PDLIM7-215ENST00000506161 ZNF692Q9BU19 519 aaPredicted RBP23.72■■□□□ 1.39
PDLIM7-215ENST00000506161 RGPD1P0DJD0 1748 aa23.71■■□□□ 1.39
PDLIM7-215ENST00000506161 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
PDLIM7-215ENST00000506161 A0A1W2PP64 1363 aa23.71■■□□□ 1.39
PDLIM7-215ENST00000506161 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
PDLIM7-215ENST00000506161 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.38
PDLIM7-215ENST00000506161 SOX12O15370 315 aa23.7■■□□□ 1.38
PDLIM7-215ENST00000506161 NME9Q86XW9 330 aa23.7■■□□□ 1.38
PDLIM7-215ENST00000506161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.7■■□□□ 1.38
PDLIM7-215ENST00000506161 AATKQ6ZMQ8 1374 aa23.69■■□□□ 1.38
PDLIM7-215ENST00000506161 USP47Q96K76 1375 aa23.69■■□□□ 1.38
PDLIM7-215ENST00000506161 EN1Q05925 392 aaPredicted RBP23.69■■□□□ 1.38
PDLIM7-215ENST00000506161 TMC1Q8TDI8 760 aa23.69■■□□□ 1.38
PDLIM7-215ENST00000506161 LRRC37A3O60309 1634 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms