RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
SNF8-204ENST00000506104 ANKARQ7Z5J8 1434 aa12.08□□□□□ -0.48
SNF8-204ENST00000506104 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
SNF8-204ENST00000506104 EIF3AQ14152 1382 aaKnown RBP12.07□□□□□ -0.48
SNF8-204ENST00000506104 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
SNF8-204ENST00000506104 DLC1Q96QB1 1528 aa12.07□□□□□ -0.48
SNF8-204ENST00000506104 WASLO00401 505 aaPredicted RBP12.07□□□□□ -0.48
SNF8-204ENST00000506104 PRR36Q9H6K5 1346 aa12.07□□□□□ -0.48
SNF8-204ENST00000506104 ACIN1Q9UKV3 1341 aaKnown RBP12.07□□□□□ -0.48
SNF8-204ENST00000506104 ALS2Q96Q42 1657 aa12.06□□□□□ -0.48
SNF8-204ENST00000506104 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
SNF8-204ENST00000506104 EVA1CP58658 441 aa12.06□□□□□ -0.48
SNF8-204ENST00000506104 ZC3H6P61129 1189 aaKnown RBP12.06□□□□□ -0.48
SNF8-204ENST00000506104 R3HDM1Q15032 1099 aaKnown RBP12.06□□□□□ -0.48
SNF8-204ENST00000506104 TULP4Q9NRJ4 1543 aa12.06□□□□□ -0.48
SNF8-204ENST00000506104 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
SNF8-204ENST00000506104 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
SNF8-204ENST00000506104 TRIM37O94972 964 aa12.04□□□□□ -0.48
SNF8-204ENST00000506104 SPATA31A5Q5VU36 1347 aa12.04□□□□□ -0.48
SNF8-204ENST00000506104 SPATA31A7Q8IWB4 1347 aa12.04□□□□□ -0.48
SNF8-204ENST00000506104 EP400Q96L91 3159 aa12.03□□□□□ -0.48
SNF8-204ENST00000506104 HRCP23327 699 aa12.03□□□□□ -0.48
SNF8-204ENST00000506104 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
SNF8-204ENST00000506104 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
SNF8-204ENST00000506104 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
SNF8-204ENST00000506104 LRP5O75197 1615 aa12.03□□□□□ -0.48
SNF8-204ENST00000506104 KIAA0232Q92628 1395 aa12.03□□□□□ -0.48
SNF8-204ENST00000506104 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
SNF8-204ENST00000506104 APBA3O96018 575 aa12.02□□□□□ -0.49
SNF8-204ENST00000506104 CDK19Q9BWU1 502 aa12.02□□□□□ -0.49
SNF8-204ENST00000506104 PHRF1Q9P1Y6 1649 aaKnown RBP12.01□□□□□ -0.49
SNF8-204ENST00000506104 CRYBG1Q9Y4K1 1723 aa12.01□□□□□ -0.49
SNF8-204ENST00000506104 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
SNF8-204ENST00000506104 TNS1Q9HBL0 1735 aaKnown RBP12□□□□□ -0.49
SNF8-204ENST00000506104 KCNA4P22459 653 aa12□□□□□ -0.49
SNF8-204ENST00000506104 ABTB2Q8N961 1025 aa12□□□□□ -0.49
SNF8-204ENST00000506104 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
SNF8-204ENST00000506104 FAM196AQ6ZSG2 479 aa11.99□□□□□ -0.49
SNF8-204ENST00000506104 ACEP12821 1306 aa11.99□□□□□ -0.49
SNF8-204ENST00000506104 SPATA31A1Q5TZJ5 1347 aa11.99□□□□□ -0.49
SNF8-204ENST00000506104 THSD7AQ9UPZ6 1657 aa11.98□□□□□ -0.49
SNF8-204ENST00000506104 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
SNF8-204ENST00000506104 ATP7BP35670 1465 aa11.96□□□□□ -0.49
SNF8-204ENST00000506104 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.49
SNF8-204ENST00000506104 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
SNF8-204ENST00000506104 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
SNF8-204ENST00000506104 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
SNF8-204ENST00000506104 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
SNF8-204ENST00000506104 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
SNF8-204ENST00000506104 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
SNF8-204ENST00000506104 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
SNF8-204ENST00000506104 SOX12O15370 315 aa11.93□□□□□ -0.5
SNF8-204ENST00000506104 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
SNF8-204ENST00000506104 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
SNF8-204ENST00000506104 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
SNF8-204ENST00000506104 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
SNF8-204ENST00000506104 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
SNF8-204ENST00000506104 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
SNF8-204ENST00000506104 CAMTA1Q9Y6Y1 1673 aa11.92□□□□□ -0.5
SNF8-204ENST00000506104 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
SNF8-204ENST00000506104 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
SNF8-204ENST00000506104 QRICH2Q9H0J4 1663 aa11.91□□□□□ -0.5
SNF8-204ENST00000506104 NLRP6P59044 892 aa11.91□□□□□ -0.5
SNF8-204ENST00000506104 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
SNF8-204ENST00000506104 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
SNF8-204ENST00000506104 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.5
SNF8-204ENST00000506104 DISP2A7MBM2 1401 aa11.9□□□□□ -0.5
SNF8-204ENST00000506104 GCP02774 474 aa11.9□□□□□ -0.5
SNF8-204ENST00000506104 CSB-PGBD3P0DP91 1061 aa11.9□□□□□ -0.5
SNF8-204ENST00000506104 BARGINQ6ZT62 677 aa11.9□□□□□ -0.5
SNF8-204ENST00000506104 KIAA1210Q9ULL0 1709 aa11.9□□□□□ -0.5
SNF8-204ENST00000506104 RREB1Q92766 1687 aa11.9□□□□□ -0.5
SNF8-204ENST00000506104 POLR3AO14802 1390 aaPredicted RBP11.9□□□□□ -0.5
SNF8-204ENST00000506104 PLEKHG3A1L390 1219 aa11.89□□□□□ -0.51
SNF8-204ENST00000506104 ADRA2BP18089 450 aa11.89□□□□□ -0.51
SNF8-204ENST00000506104 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
SNF8-204ENST00000506104 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
SNF8-204ENST00000506104 SRCAPQ6ZRS2 3230 aa11.88□□□□□ -0.51
SNF8-204ENST00000506104 YY1P25490 414 aa11.88□□□□□ -0.51
SNF8-204ENST00000506104 PARD3Q8TEW0 1356 aa11.88□□□□□ -0.51
SNF8-204ENST00000506104 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
SNF8-204ENST00000506104 DDB1Q16531 1140 aa11.87□□□□□ -0.51
SNF8-204ENST00000506104 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
SNF8-204ENST00000506104 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
SNF8-204ENST00000506104 THRAP3Q9Y2W1 955 aaKnown RBP11.87□□□□□ -0.51
SNF8-204ENST00000506104 AKAP12Q02952 1782 aa11.87□□□□□ -0.51
SNF8-204ENST00000506104 USP19O94966 1318 aa11.86□□□□□ -0.51
SNF8-204ENST00000506104 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
SNF8-204ENST00000506104 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
SNF8-204ENST00000506104 CPDO75976 1380 aa11.86□□□□□ -0.51
SNF8-204ENST00000506104 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
SNF8-204ENST00000506104 CRB1P82279 1406 aa11.86□□□□□ -0.51
SNF8-204ENST00000506104 KCNQ2O43526 872 aa11.85□□□□□ -0.51
SNF8-204ENST00000506104 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
SNF8-204ENST00000506104 OVOS2A0A0G2JMS6 1433 aa11.85□□□□□ -0.51
SNF8-204ENST00000506104 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
SNF8-204ENST00000506104 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
SNF8-204ENST00000506104 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
SNF8-204ENST00000506104 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
SNF8-204ENST00000506104 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms