RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 COL14A1Q05707 1796 aaKnown RBP35.71■■■■□ 3.31
HERC4-212ENST00000505760 BTG4Q9NY30 223 aa35.71■■■■□ 3.31
HERC4-212ENST00000505760 NRAPQ86VF7 1730 aa35.69■■■■□ 3.3
HERC4-212ENST00000505760 CRYBG1Q9Y4K1 1723 aa35.68■■■■□ 3.3
HERC4-212ENST00000505760 ONECUT3O60422 494 aaPredicted RBP35.66■■■■□ 3.3
HERC4-212ENST00000505760 CCDC61Q9Y6R9 512 aa35.66■■■■□ 3.3
HERC4-212ENST00000505760 TOPAZ1Q8N9V7 1692 aa35.65■■■■□ 3.3
HERC4-212ENST00000505760 A0A0G2JS52 829 aa35.65■■■■□ 3.3
HERC4-212ENST00000505760 MYT1Q01538 1121 aa35.65■■■■□ 3.3
HERC4-212ENST00000505760 BLMP54132 1417 aaPredicted RBP35.64■■■■□ 3.3
HERC4-212ENST00000505760 PRDM11Q9NQV5 511 aa35.63■■■■□ 3.29
HERC4-212ENST00000505760 ACEP12821 1306 aa35.62■■■■□ 3.29
HERC4-212ENST00000505760 POLR3AO14802 1390 aaPredicted RBP35.62■■■■□ 3.29
HERC4-212ENST00000505760 KRT27Q7Z3Y8 459 aa35.61■■■■□ 3.29
HERC4-212ENST00000505760 ZRANB1Q9UGI0 708 aa35.61■■■■□ 3.29
HERC4-212ENST00000505760 CENPJQ9HC77 1338 aaPredicted RBP35.6■■■■□ 3.29
HERC4-212ENST00000505760 SRCAPQ6ZRS2 3230 aa35.59■■■■□ 3.29
HERC4-212ENST00000505760 FAM98CQ17RN3 349 aaKnown RBP35.59■■■■□ 3.29
HERC4-212ENST00000505760 NBPF8Q3BBV2 869 aa35.59■■■■□ 3.29
HERC4-212ENST00000505760 PLEKHG3A1L390 1219 aa35.58■■■■□ 3.29
HERC4-212ENST00000505760 SRPK2P78362 688 aaKnown RBP35.58■■■■□ 3.29
HERC4-212ENST00000505760 SF3B2Q13435 895 aaKnown RBP35.57■■■■□ 3.28
HERC4-212ENST00000505760 NUTM2GQ5VZR2 741 aa35.57■■■■□ 3.28
HERC4-212ENST00000505760 L3MBTL2Q969R5 705 aa35.57■■■■□ 3.28
HERC4-212ENST00000505760 PHRF1Q9P1Y6 1649 aaKnown RBP35.57■■■■□ 3.28
HERC4-212ENST00000505760 KIAA0232Q92628 1395 aa35.55■■■■□ 3.28
HERC4-212ENST00000505760 QRICH2Q9H0J4 1663 aa35.55■■■■□ 3.28
HERC4-212ENST00000505760 SPATA31A5Q5VU36 1347 aa35.53■■■■□ 3.28
HERC4-212ENST00000505760 SPATA31A7Q8IWB4 1347 aa35.53■■■■□ 3.28
HERC4-212ENST00000505760 PPIP5K1Q6PFW1 1433 aa35.51■■■■□ 3.28
HERC4-212ENST00000505760 CHRNA2Q15822 529 aa35.51■■■■□ 3.28
HERC4-212ENST00000505760 ABTB2Q8N961 1025 aa35.51■■■■□ 3.28
HERC4-212ENST00000505760 SIN3AQ96ST3 1273 aa35.51■■■■□ 3.28
HERC4-212ENST00000505760 ZC3H6P61129 1189 aaKnown RBP35.5■■■■□ 3.27
HERC4-212ENST00000505760 CABP2Q9NPB3 220 aa35.5■■■■□ 3.27
HERC4-212ENST00000505760 DEFB132Q7Z7B7 95 aa35.49■■■■□ 3.27
HERC4-212ENST00000505760 NEUROD1Q13562 356 aa35.48■■■■□ 3.27
HERC4-212ENST00000505760 STRN4Q9NRL3 753 aa35.46■■■■□ 3.27
HERC4-212ENST00000505760 TRPM1Q7Z4N2 1603 aa35.45■■■■□ 3.27
HERC4-212ENST00000505760 NRKQ7Z2Y5 1582 aa35.42■■■■□ 3.26
HERC4-212ENST00000505760 SPATA31A1Q5TZJ5 1347 aa35.41■■■■□ 3.26
HERC4-212ENST00000505760 THSD7AQ9UPZ6 1657 aa35.41■■■■□ 3.26
HERC4-212ENST00000505760 NLRP13Q86W25 1043 aa35.4■■■■□ 3.26
HERC4-212ENST00000505760 ROCK2O75116 1388 aaKnown RBP35.39■■■■□ 3.26
HERC4-212ENST00000505760 EVA1CP58658 441 aa35.39■■■■□ 3.26
HERC4-212ENST00000505760 CABP1Q9NZU7 370 aa35.39■■■■□ 3.26
HERC4-212ENST00000505760 USP19O94966 1318 aa35.38■■■■□ 3.25
HERC4-212ENST00000505760 BRD4O60885 1362 aaPredicted RBP35.38■■■■□ 3.25
HERC4-212ENST00000505760 EVC2Q86UK5 1308 aa35.37■■■■□ 3.25
HERC4-212ENST00000505760 FAM182BQ5T319 152 aa35.37■■■■□ 3.25
HERC4-212ENST00000505760 BAG6P46379 1132 aa35.36■■■■□ 3.25
HERC4-212ENST00000505760 CPDO75976 1380 aa35.36■■■■□ 3.25
HERC4-212ENST00000505760 USP35Q9P2H5 1018 aa35.35■■■■□ 3.25
HERC4-212ENST00000505760 USP6P35125 1406 aa35.33■■■■□ 3.25
HERC4-212ENST00000505760 SSH2Q76I76 1423 aa35.33■■■■□ 3.25
HERC4-212ENST00000505760 RGPD1P0DJD0 1748 aa35.33■■■■□ 3.25
HERC4-212ENST00000505760 GCP02774 474 aa35.33■■■■□ 3.25
HERC4-212ENST00000505760 CAMTA1Q9Y6Y1 1673 aa35.32■■■■□ 3.24
HERC4-212ENST00000505760 LMO7Q8WWI1 1683 aa35.3■■■■□ 3.24
HERC4-212ENST00000505760 NLRP6P59044 892 aa35.28■■■■□ 3.24
HERC4-212ENST00000505760 LARP1Q6PKG0 1096 aaKnown RBP35.28■■■■□ 3.24
HERC4-212ENST00000505760 BARGINQ6ZT62 677 aa35.25■■■■□ 3.23
HERC4-212ENST00000505760 ZBTB7CA1YPR0 619 aa35.24■■■■□ 3.23
HERC4-212ENST00000505760 FAM196AQ6ZSG2 479 aa35.23■■■■□ 3.23
HERC4-212ENST00000505760 TCP11L2Q8N4U5 519 aa35.23■■■■□ 3.23
HERC4-212ENST00000505760 EN1Q05925 392 aaPredicted RBP35.22■■■■□ 3.23
HERC4-212ENST00000505760 PIK3C2AO00443 1686 aa35.21■■■■□ 3.23
HERC4-212ENST00000505760 TNS1Q9HBL0 1735 aaKnown RBP35.21■■■■□ 3.23
HERC4-212ENST00000505760 PDE3BQ13370 1112 aa35.21■■■■□ 3.23
HERC4-212ENST00000505760 ZNF692Q9BU19 519 aaPredicted RBP35.2■■■■□ 3.23
HERC4-212ENST00000505760 COL5A2P05997 1499 aaPredicted RBP35.2■■■■□ 3.23
HERC4-212ENST00000505760 SLIT3O75094 1523 aa35.2■■■■□ 3.23
HERC4-212ENST00000505760 AKAP12Q02952 1782 aa35.18■■■■□ 3.22
HERC4-212ENST00000505760 THRAP3Q9Y2W1 955 aaKnown RBP35.18■■■■□ 3.22
HERC4-212ENST00000505760 TRIM37O94972 964 aa35.17■■■■□ 3.22
HERC4-212ENST00000505760 DISP2A7MBM2 1401 aa35.15■■■■□ 3.22
HERC4-212ENST00000505760 AATKQ6ZMQ8 1374 aa35.15■■■■□ 3.22
HERC4-212ENST00000505760 TTC21BQ7Z4L5 1316 aa35.14■■■■□ 3.22
HERC4-212ENST00000505760 CARD11Q9BXL7 1154 aa35.14■■■■□ 3.22
HERC4-212ENST00000505760 CRB1P82279 1406 aa35.14■■■■□ 3.22
HERC4-212ENST00000505760 PSDA5PKW4 1024 aaPredicted RBP35.13■■■■□ 3.21
HERC4-212ENST00000505760 TONSLQ96HA7 1378 aa35.12■■■■□ 3.21
HERC4-212ENST00000505760 SBNO2Q9Y2G9 1366 aa35.11■■■■□ 3.21
HERC4-212ENST00000505760 TTC21AQ8NDW8 1320 aa35.1■■■■□ 3.21
HERC4-212ENST00000505760 KTN1Q86UP2 1357 aaKnown RBP35.1■■■■□ 3.21
HERC4-212ENST00000505760 PARP4Q9UKK3 1724 aaKnown RBP35.09■■■■□ 3.21
HERC4-212ENST00000505760 EZH2Q15910 746 aaKnown RBP35.09■■■■□ 3.21
HERC4-212ENST00000505760 KCNH5Q8NCM2 988 aa35.09■■■■□ 3.21
HERC4-212ENST00000505760 CPSF1Q10570 1443 aaKnown RBP35.08■■■■□ 3.21
HERC4-212ENST00000505760 APBA3O96018 575 aa35.08■■■■□ 3.21
HERC4-212ENST00000505760 COL18A1P39060 1754 aa35.08■■■■□ 3.21
HERC4-212ENST00000505760 SOX12O15370 315 aa35.06■■■■□ 3.2
HERC4-212ENST00000505760 TOM1L2Q6ZVM7 507 aa35.06■■■■□ 3.2
HERC4-212ENST00000505760 CAMKK2Q96RR4 588 aa35.05■■■■□ 3.2
HERC4-212ENST00000505760 LRP5O75197 1615 aa35.05■■■■□ 3.2
HERC4-212ENST00000505760 MON2Q7Z3U7 1717 aa35.03■■■■□ 3.2
HERC4-212ENST00000505760 ARHGEF25Q86VW2 580 aa35.03■■■■□ 3.2
HERC4-212ENST00000505760 AXIN2Q9Y2T1 843 aa35.03■■■■□ 3.2
HERC4-212ENST00000505760 PARD3Q8TEW0 1356 aa35.01■■■■□ 3.2
HERC4-212ENST00000505760 RGPD5Q99666 1765 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms