RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-214ENST00000505746 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
PDLIM7-214ENST00000505746 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-214ENST00000505746 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 A0A0G2JS52 829 aa17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 MYT1Q01538 1121 aa17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
PDLIM7-214ENST00000505746 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-214ENST00000505746 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-214ENST00000505746 ABCA3Q99758 1704 aa17.34■□□□□ 0.37
PDLIM7-214ENST00000505746 PLCH1Q4KWH8 1693 aa17.33■□□□□ 0.37
PDLIM7-214ENST00000505746 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-214ENST00000505746 SIN3AQ96ST3 1273 aa17.33■□□□□ 0.36
PDLIM7-214ENST00000505746 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
PDLIM7-214ENST00000505746 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
PDLIM7-214ENST00000505746 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
PDLIM7-214ENST00000505746 KIAA0232Q92628 1395 aa17.31■□□□□ 0.36
PDLIM7-214ENST00000505746 COL14A1Q05707 1796 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-214ENST00000505746 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
PDLIM7-214ENST00000505746 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
PDLIM7-214ENST00000505746 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
PDLIM7-214ENST00000505746 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
PDLIM7-214ENST00000505746 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-214ENST00000505746 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
PDLIM7-214ENST00000505746 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
PDLIM7-214ENST00000505746 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
PDLIM7-214ENST00000505746 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-214ENST00000505746 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
PDLIM7-214ENST00000505746 EVA1CP58658 441 aa17.27■□□□□ 0.36
PDLIM7-214ENST00000505746 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
PDLIM7-214ENST00000505746 CABP1Q9NZU7 370 aa17.27■□□□□ 0.36
PDLIM7-214ENST00000505746 DEFB132Q7Z7B7 95 aa17.26■□□□□ 0.35
PDLIM7-214ENST00000505746 EP400Q96L91 3159 aa17.26■□□□□ 0.35
PDLIM7-214ENST00000505746 NRAPQ86VF7 1730 aa17.26■□□□□ 0.35
PDLIM7-214ENST00000505746 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-214ENST00000505746 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
PDLIM7-214ENST00000505746 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
PDLIM7-214ENST00000505746 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
PDLIM7-214ENST00000505746 USP19O94966 1318 aa17.24■□□□□ 0.35
PDLIM7-214ENST00000505746 GCP02774 474 aa17.24■□□□□ 0.35
PDLIM7-214ENST00000505746 BAG6P46379 1132 aa17.24■□□□□ 0.35
PDLIM7-214ENST00000505746 CPDO75976 1380 aa17.23■□□□□ 0.35
PDLIM7-214ENST00000505746 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
PDLIM7-214ENST00000505746 NLRP6P59044 892 aa17.21■□□□□ 0.35
PDLIM7-214ENST00000505746 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-214ENST00000505746 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-214ENST00000505746 USP6P35125 1406 aa17.21■□□□□ 0.34
PDLIM7-214ENST00000505746 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
PDLIM7-214ENST00000505746 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
PDLIM7-214ENST00000505746 SSH2Q76I76 1423 aa17.2■□□□□ 0.34
PDLIM7-214ENST00000505746 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
PDLIM7-214ENST00000505746 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
PDLIM7-214ENST00000505746 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-214ENST00000505746 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
PDLIM7-214ENST00000505746 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
PDLIM7-214ENST00000505746 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
PDLIM7-214ENST00000505746 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-214ENST00000505746 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
PDLIM7-214ENST00000505746 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
PDLIM7-214ENST00000505746 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
PDLIM7-214ENST00000505746 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
PDLIM7-214ENST00000505746 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
PDLIM7-214ENST00000505746 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
PDLIM7-214ENST00000505746 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
PDLIM7-214ENST00000505746 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
PDLIM7-214ENST00000505746 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
PDLIM7-214ENST00000505746 EN1Q05925 392 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-214ENST00000505746 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
PDLIM7-214ENST00000505746 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
PDLIM7-214ENST00000505746 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
PDLIM7-214ENST00000505746 TRIM37O94972 964 aa17.12■□□□□ 0.33
PDLIM7-214ENST00000505746 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-214ENST00000505746 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
PDLIM7-214ENST00000505746 KTN1Q86UP2 1357 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-214ENST00000505746 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
PDLIM7-214ENST00000505746 CRB1P82279 1406 aa17.11■□□□□ 0.33
PDLIM7-214ENST00000505746 SLIT3O75094 1523 aa17.11■□□□□ 0.33
PDLIM7-214ENST00000505746 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-214ENST00000505746 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-214ENST00000505746 APBA3O96018 575 aa17.09■□□□□ 0.33
PDLIM7-214ENST00000505746 TOM1L2Q6ZVM7 507 aa17.09■□□□□ 0.33
PDLIM7-214ENST00000505746 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
PDLIM7-214ENST00000505746 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-214ENST00000505746 TRIM26Q12899 539 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-214ENST00000505746 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-214ENST00000505746 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 SRCAPQ6ZRS2 3230 aa17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 SOX12O15370 315 aa17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 HDGFL2Q7Z4V5 671 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
PDLIM7-214ENST00000505746 PARD3Q8TEW0 1356 aa17.06■□□□□ 0.32
PDLIM7-214ENST00000505746 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
PDLIM7-214ENST00000505746 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-214ENST00000505746 PIK3C2AO00443 1686 aa17.06■□□□□ 0.32
PDLIM7-214ENST00000505746 DDB1Q16531 1140 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms