RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 RECKO95980 971 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLFNL1Q499Z3 407 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 ANKMY2Q8IV38 441 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZNF594Q96JF6 807 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 DNAJC2Q99543 621 aaKnown RBP5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLAIN2Q9P270 581 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 RBM19Q9Y4C8 960 aaKnown RBP5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 PCDHGA4Q9Y5G9 962 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 CADPSQ9ULU8 1353 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 ATP5J2-PTCD1G3V325 749 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 PRMT3O60678 531 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLC34A2O95436 690 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 BRD2P25440 801 aaKnown RBP5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 GCGRP47871 477 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 FOSBP53539 338 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 ATN1P54259 1190 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 DPYDQ12882 1025 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 NCOA4Q13772 614 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 EAPPQ56P03 285 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 GIMAP6Q6P9H5 292 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 C3orf67Q6ZVT6 689 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 NFATC2IPQ8NCF5 419 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 TMEM134Q9H6X4 195 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 PTK7Q13308 1070 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 GRIPAP1Q4V328 841 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 PLEKHM2Q8IWE5 1019 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 BACH2Q9BYV9 841 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 ADAM33Q9BZ11 813 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 FAM198AQ9UFP1 575 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 ZBBXA8MT70 800 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 SCAMP3O14828 347 aaKnown RBP5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 GALR2O43603 387 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 FBXO45P0C2W1 286 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 GTF2F1P35269 517 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 IER5LQ5T953 404 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 FBXO33Q7Z6M2 555 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 PACS2Q86VP3 889 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 FAM174AQ8TBP5 190 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 TATDN2Q93075 761 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 PRIMPOLQ96LW4 560 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 MRS2Q9HD23 443 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 DCTN4Q9UJW0 460 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 SMAPO00193 183 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 PER1O15534 1290 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 LZTS3O60299 673 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 MARCH6O60337 910 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 ATP2B1P20020 1258 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 HDLBPQ00341 1268 aaKnown RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 XPCQ01831 940 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 FAM69CQ0P6D2 419 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 RNF135Q8IUD6 432 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 OGFOD1Q8N543 542 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 TMEM87AQ8NBN3 555 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 TMC1Q8TDI8 760 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 SYMPKQ92797 1274 aaKnown RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 ASB16Q96NS5 453 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 CCSER2Q9H7U1 834 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 CAPN10Q9HC96 672 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 BRPF3Q9ULD4 1205 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 IQSEC3Q9UPP2 1182 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 ICMTO60725 284 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 KCNH2Q12809 1159 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 SWI5Q1ZZU3 235 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 EML3Q32P44 896 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 CHRDL2Q6WN34 429 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 ZNF662Q6ZS27 426 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 NOP9Q86U38 636 aaKnown RBP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 TRIM50Q86XT4 487 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 CERS3Q8IU89 383 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 PMFBP1Q8TBY8 1022 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 PIK3R5Q8WYR1 880 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 DHX38Q92620 1227 aaKnown RBP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 DNAAF2Q9NVR5 837 aaKnown RBP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 PRKAG2Q9UGJ0 569 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 EGFL7Q9UHF1 273 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 TSKSQ9UJT2 592 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 SLC4A3P48751 1232 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 ATP1A2P50993 1020 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 PSME1Q06323 249 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 GNL2Q13823 731 aaKnown RBP5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 PLPP7Q8NBV4 271 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 HINFPQ9BQA5 517 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 MKNK1Q9BUB5 465 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 LNPKQ9C0E8 428 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 PCDHB9Q9Y5E1 797 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 LGR5O75473 907 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 FMNL1O95466 1100 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 C7P10643 843 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 COL9A1P20849 921 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 HDGFP51858 240 aaKnown RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 NT5DC4Q86YG4 428 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 POTEDQ86YR6 584 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 ZNF526Q8TF50 670 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 GTF3C2Q8WUA4 911 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 NOD1Q9Y239 953 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 C3orf80F5H4A9 247 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 C21orf2O43822 256 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 ITGAEP38570 1179 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms