RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 BAG6P46379 1132 aa16.12■□□□□ 0.17
UBE2D3-219ENST00000505207 FAM98CQ17RN3 349 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-219ENST00000505207 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
UBE2D3-219ENST00000505207 EP400Q96L91 3159 aa16.11■□□□□ 0.17
UBE2D3-219ENST00000505207 DEFB132Q7Z7B7 95 aa16.1■□□□□ 0.17
UBE2D3-219ENST00000505207 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
UBE2D3-219ENST00000505207 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
UBE2D3-219ENST00000505207 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.16
UBE2D3-219ENST00000505207 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.16
UBE2D3-219ENST00000505207 TRPM3Q9HCF6 1732 aaPredicted RBP16.08■□□□□ 0.16
UBE2D3-219ENST00000505207 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-219ENST00000505207 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
UBE2D3-219ENST00000505207 ALS2Q96Q42 1657 aa16.06■□□□□ 0.16
UBE2D3-219ENST00000505207 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
UBE2D3-219ENST00000505207 EVA1CP58658 441 aa16.06■□□□□ 0.16
UBE2D3-219ENST00000505207 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
UBE2D3-219ENST00000505207 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
UBE2D3-219ENST00000505207 ATP7BP35670 1465 aa16.05■□□□□ 0.16
UBE2D3-219ENST00000505207 ACEP12821 1306 aa16.05■□□□□ 0.16
UBE2D3-219ENST00000505207 POLR3AO14802 1390 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 ABTB2Q8N961 1025 aa16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 ITSN1Q15811 1721 aa16.04■□□□□ 0.16
UBE2D3-219ENST00000505207 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-219ENST00000505207 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
UBE2D3-219ENST00000505207 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
UBE2D3-219ENST00000505207 CHRNA2Q15822 529 aa16.02■□□□□ 0.16
UBE2D3-219ENST00000505207 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.16
UBE2D3-219ENST00000505207 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.16
UBE2D3-219ENST00000505207 NLRP13Q86W25 1043 aa16.02■□□□□ 0.16
UBE2D3-219ENST00000505207 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.15
UBE2D3-219ENST00000505207 CENPJQ9HC77 1338 aaPredicted RBP16.01■□□□□ 0.15
UBE2D3-219ENST00000505207 NBPF1Q3BBV0 1214 aa16.01■□□□□ 0.15
UBE2D3-219ENST00000505207 NRAPQ86VF7 1730 aa16.01■□□□□ 0.15
UBE2D3-219ENST00000505207 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
UBE2D3-219ENST00000505207 KIAA1210Q9ULL0 1709 aa16■□□□□ 0.15
UBE2D3-219ENST00000505207 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-219ENST00000505207 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
UBE2D3-219ENST00000505207 BARGINQ6ZT62 677 aa15.99■□□□□ 0.15
UBE2D3-219ENST00000505207 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
UBE2D3-219ENST00000505207 USP35Q9P2H5 1018 aa15.98■□□□□ 0.15
UBE2D3-219ENST00000505207 C11orf95C9JLR9 678 aaPredicted RBP15.97■□□□□ 0.15
UBE2D3-219ENST00000505207 THRAP3Q9Y2W1 955 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-219ENST00000505207 CPDO75976 1380 aa15.97■□□□□ 0.15
UBE2D3-219ENST00000505207 PPIP5K1Q6PFW1 1433 aa15.96■□□□□ 0.15
UBE2D3-219ENST00000505207 GCP02774 474 aa15.96■□□□□ 0.15
UBE2D3-219ENST00000505207 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.15
UBE2D3-219ENST00000505207 CABP2Q9NPB3 220 aa15.96■□□□□ 0.15
UBE2D3-219ENST00000505207 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-219ENST00000505207 TRIM37O94972 964 aa15.95■□□□□ 0.14
UBE2D3-219ENST00000505207 USP19O94966 1318 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 CRYBG1Q9Y4K1 1723 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 APBA3O96018 575 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 NLRP6P59044 892 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 CABP1Q9NZU7 370 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
UBE2D3-219ENST00000505207 THSD7AQ9UPZ6 1657 aa15.93■□□□□ 0.14
UBE2D3-219ENST00000505207 PARD3Q8TEW0 1356 aa15.93■□□□□ 0.14
UBE2D3-219ENST00000505207 LARP1Q6PKG0 1096 aaKnown RBP15.93■□□□□ 0.14
UBE2D3-219ENST00000505207 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
UBE2D3-219ENST00000505207 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
UBE2D3-219ENST00000505207 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
UBE2D3-219ENST00000505207 PHRF1Q9P1Y6 1649 aaKnown RBP15.92■□□□□ 0.14
UBE2D3-219ENST00000505207 TOPAZ1Q8N9V7 1692 aa15.92■□□□□ 0.14
UBE2D3-219ENST00000505207 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
UBE2D3-219ENST00000505207 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
UBE2D3-219ENST00000505207 CAMKK2Q96RR4 588 aa15.91■□□□□ 0.14
UBE2D3-219ENST00000505207 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
UBE2D3-219ENST00000505207 NBPF14Q5TI25 921 aa15.9■□□□□ 0.14
UBE2D3-219ENST00000505207 CAMTA1Q9Y6Y1 1673 aa15.89■□□□□ 0.13
UBE2D3-219ENST00000505207 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
UBE2D3-219ENST00000505207 USP6P35125 1406 aa15.88■□□□□ 0.13
UBE2D3-219ENST00000505207 LRP5O75197 1615 aa15.88■□□□□ 0.13
UBE2D3-219ENST00000505207 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
UBE2D3-219ENST00000505207 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
UBE2D3-219ENST00000505207 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
UBE2D3-219ENST00000505207 ROCK2O75116 1388 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-219ENST00000505207 CRB1P82279 1406 aa15.86■□□□□ 0.13
UBE2D3-219ENST00000505207 TOM1L2Q6ZVM7 507 aa15.86■□□□□ 0.13
UBE2D3-219ENST00000505207 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-219ENST00000505207 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
UBE2D3-219ENST00000505207 TTC21AQ8NDW8 1320 aa15.85■□□□□ 0.13
UBE2D3-219ENST00000505207 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
UBE2D3-219ENST00000505207 QRICH2Q9H0J4 1663 aa15.84■□□□□ 0.13
UBE2D3-219ENST00000505207 DDB1Q16531 1140 aa15.84■□□□□ 0.13
UBE2D3-219ENST00000505207 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.13
UBE2D3-219ENST00000505207 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
UBE2D3-219ENST00000505207 CSB-PGBD3P0DP91 1061 aa15.82■□□□□ 0.12
UBE2D3-219ENST00000505207 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
UBE2D3-219ENST00000505207 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
UBE2D3-219ENST00000505207 OVOS2A0A0J9YW53 1432 aa15.81■□□□□ 0.12
UBE2D3-219ENST00000505207 OVOS2Q6IE36 1432 aa15.81■□□□□ 0.12
UBE2D3-219ENST00000505207 ARHGEF25Q86VW2 580 aa15.81■□□□□ 0.12
UBE2D3-219ENST00000505207 WDR17Q8IZU2 1322 aa15.81■□□□□ 0.12
UBE2D3-219ENST00000505207 SLIT3O75094 1523 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms