RNA–Protein interactions for RNA: ENST00000505143.5

CAST-215, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-215ENST00000505143 ALDH1A1P00352 501 aa11.4□□□□□ -0.58
CAST-215ENST00000505143 CLK2P49760 499 aaKnown RBP11.4□□□□□ -0.58
CAST-215ENST00000505143 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
CAST-215ENST00000505143 ZNF511Q8NB15 262 aa11.4□□□□□ -0.58
CAST-215ENST00000505143 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
CAST-215ENST00000505143 HPS1Q92902 700 aa11.39□□□□□ -0.59
CAST-215ENST00000505143 KDM4CQ9H3R0 1056 aa11.38□□□□□ -0.59
CAST-215ENST00000505143 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
CAST-215ENST00000505143 TSC1Q92574 1164 aa11.37□□□□□ -0.59
CAST-215ENST00000505143 ZNF775Q96BV0 537 aaPredicted RBP11.37□□□□□ -0.59
CAST-215ENST00000505143 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
CAST-215ENST00000505143 MAP10Q9P2G4 905 aa11.37□□□□□ -0.59
CAST-215ENST00000505143 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
CAST-215ENST00000505143 VARSP26640 1264 aaKnown RBP11.36□□□□□ -0.59
CAST-215ENST00000505143 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
CAST-215ENST00000505143 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
CAST-215ENST00000505143 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
CAST-215ENST00000505143 GMPR2Q9P2T1 348 aaKnown RBP11.34□□□□□ -0.59
CAST-215ENST00000505143 WASF2Q9Y6W5 498 aa11.34□□□□□ -0.59
CAST-215ENST00000505143 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
CAST-215ENST00000505143 FAM117AQ9C073 453 aa11.33□□□□□ -0.6
CAST-215ENST00000505143 MPNDQ8N594 471 aa11.32□□□□□ -0.6
CAST-215ENST00000505143 ATP13A2Q9NQ11 1180 aa11.32□□□□□ -0.6
CAST-215ENST00000505143 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
CAST-215ENST00000505143 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
CAST-215ENST00000505143 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
CAST-215ENST00000505143 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CAST-215ENST00000505143 ARMC2Q8NEN0 867 aa11.29□□□□□ -0.6
CAST-215ENST00000505143 FAM174AQ8TBP5 190 aa11.28□□□□□ -0.6
CAST-215ENST00000505143 FOXJ1Q92949 421 aa11.28□□□□□ -0.6
CAST-215ENST00000505143 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
CAST-215ENST00000505143 BPHLQ86WA6 291 aaPredicted RBP11.26□□□□□ -0.61
CAST-215ENST00000505143 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
CAST-215ENST00000505143 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
CAST-215ENST00000505143 AGERQ15109 404 aa11.25□□□□□ -0.61
CAST-215ENST00000505143 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
CAST-215ENST00000505143 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
CAST-215ENST00000505143 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
CAST-215ENST00000505143 PPP2R2DQ66LE6 453 aa11.24□□□□□ -0.61
CAST-215ENST00000505143 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
CAST-215ENST00000505143 CDK15Q96Q40 435 aa11.24□□□□□ -0.61
CAST-215ENST00000505143 NNTQ13423 1086 aa11.23□□□□□ -0.61
CAST-215ENST00000505143 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
CAST-215ENST00000505143 ATP1B4Q9UN42 357 aaPredicted RBP11.23□□□□□ -0.61
CAST-215ENST00000505143 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
CAST-215ENST00000505143 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
CAST-215ENST00000505143 ADH1CP00326 375 aa11.21□□□□□ -0.61
CAST-215ENST00000505143 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
CAST-215ENST00000505143 SNRPBP14678 240 aaKnown RBP11.2□□□□□ -0.62
CAST-215ENST00000505143 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
CAST-215ENST00000505143 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
CAST-215ENST00000505143 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
CAST-215ENST00000505143 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
CAST-215ENST00000505143 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
CAST-215ENST00000505143 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
CAST-215ENST00000505143 C1QTNF2Q9BXJ5 285 aa11.18□□□□□ -0.62
CAST-215ENST00000505143 BMP1P13497 986 aa11.17□□□□□ -0.62
CAST-215ENST00000505143 NR5A1Q13285 461 aa11.17□□□□□ -0.62
CAST-215ENST00000505143 TIMP2P16035 220 aa11.16□□□□□ -0.62
CAST-215ENST00000505143 GRM5P41594 1212 aa11.16□□□□□ -0.62
CAST-215ENST00000505143 WDR4P57081 412 aaKnown RBP11.16□□□□□ -0.62
CAST-215ENST00000505143 KLF16Q9BXK1 252 aaPredicted RBP11.16□□□□□ -0.62
CAST-215ENST00000505143 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
CAST-215ENST00000505143 AP1G2O75843 785 aa11.15□□□□□ -0.62
CAST-215ENST00000505143 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
CAST-215ENST00000505143 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
CAST-215ENST00000505143 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
CAST-215ENST00000505143 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
CAST-215ENST00000505143 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
CAST-215ENST00000505143 FKBPLQ9UIM3 349 aa11.14□□□□□ -0.63
CAST-215ENST00000505143 MAP4K5Q9Y4K4 846 aa11.14□□□□□ -0.63
CAST-215ENST00000505143 NR6A1Q15406 480 aa11.13□□□□□ -0.63
CAST-215ENST00000505143 NR3C2P08235 984 aa11.12□□□□□ -0.63
CAST-215ENST00000505143 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
CAST-215ENST00000505143 WFS1O76024 890 aa11.11□□□□□ -0.63
CAST-215ENST00000505143 MRPL14Q6P1L8 145 aaKnown RBP11.11□□□□□ -0.63
CAST-215ENST00000505143 VASH1Q7L8A9 365 aaPredicted RBP11.11□□□□□ -0.63
CAST-215ENST00000505143 ZFP42Q96MM3 310 aa11.11□□□□□ -0.63
CAST-215ENST00000505143 CARD14Q9BXL6 1004 aa11.11□□□□□ -0.63
CAST-215ENST00000505143 ZIC2O95409 532 aaPredicted RBP11.1□□□□□ -0.63
CAST-215ENST00000505143 RFC5P40937 340 aa11.1□□□□□ -0.63
CAST-215ENST00000505143 NFX1Q12986 1120 aaKnown RBP11.1□□□□□ -0.63
CAST-215ENST00000505143 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
CAST-215ENST00000505143 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
CAST-215ENST00000505143 ARHGAP9Q9BRR9 750 aa11.1□□□□□ -0.63
CAST-215ENST00000505143 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
CAST-215ENST00000505143 ITPKCQ96DU7 683 aa11.09□□□□□ -0.63
CAST-215ENST00000505143 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
CAST-215ENST00000505143 USP17L8P0C7I0 530 aa11.08□□□□□ -0.64
CAST-215ENST00000505143 FSHRP23945 695 aa11.08□□□□□ -0.64
CAST-215ENST00000505143 SCARF1Q14162 830 aa11.08□□□□□ -0.64
CAST-215ENST00000505143 TERTO14746 1132 aaKnown RBP11.07□□□□□ -0.64
CAST-215ENST00000505143 BRPF1P55201 1214 aaPredicted RBP11.07□□□□□ -0.64
CAST-215ENST00000505143 PTK2Q05397 1052 aa11.06□□□□□ -0.64
CAST-215ENST00000505143 ZBTB33Q86T24 672 aa11.06□□□□□ -0.64
CAST-215ENST00000505143 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
CAST-215ENST00000505143 PURBQ96QR8 312 aaKnown RBP11.06□□□□□ -0.64
CAST-215ENST00000505143 HMX1Q9NP08 348 aaPredicted RBP11.06□□□□□ -0.64
CAST-215ENST00000505143 GPSM3Q9Y4H4 160 aa11.06□□□□□ -0.64
CAST-215ENST00000505143 TMEM259Q4ZIN3 620 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms