RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 CRYBG1Q9Y4K1 1723 aa24.01■■□□□ 1.43
SYNE4-207ENST00000505054 TULP4Q9NRJ4 1543 aa24.01■■□□□ 1.43
SYNE4-207ENST00000505054 SEPT12Q8IYM1 358 aa24.01■■□□□ 1.43
SYNE4-207ENST00000505054 LMOD2Q6P5Q4 547 aa24■■□□□ 1.43
SYNE4-207ENST00000505054 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
SYNE4-207ENST00000505054 ONECUT3O60422 494 aaPredicted RBP23.98■■□□□ 1.43
SYNE4-207ENST00000505054 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
SYNE4-207ENST00000505054 CCDC9Q9Y3X0 531 aaKnown RBP23.98■■□□□ 1.43
SYNE4-207ENST00000505054 MINK1Q8N4C8 1332 aaPredicted RBP23.98■■□□□ 1.43
SYNE4-207ENST00000505054 PLEKHG5O94827 1062 aa23.97■■□□□ 1.43
SYNE4-207ENST00000505054 PMFBP1Q8TBY8 1022 aa23.97■■□□□ 1.43
SYNE4-207ENST00000505054 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
SYNE4-207ENST00000505054 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
SYNE4-207ENST00000505054 LRP5O75197 1615 aa23.96■■□□□ 1.43
SYNE4-207ENST00000505054 CENPJQ9HC77 1338 aaPredicted RBP23.96■■□□□ 1.43
SYNE4-207ENST00000505054 RGPD1P0DJD0 1748 aa23.94■■□□□ 1.42
SYNE4-207ENST00000505054 KRT27Q7Z3Y8 459 aa23.94■■□□□ 1.42
SYNE4-207ENST00000505054 DEFB132Q7Z7B7 95 aa23.94■■□□□ 1.42
SYNE4-207ENST00000505054 FAM83GA6ND36 823 aa23.93■■□□□ 1.42
SYNE4-207ENST00000505054 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
SYNE4-207ENST00000505054 THSD7AQ9UPZ6 1657 aa23.92■■□□□ 1.42
SYNE4-207ENST00000505054 PRR36Q9H6K5 1346 aa23.91■■□□□ 1.42
SYNE4-207ENST00000505054 WASLO00401 505 aaPredicted RBP23.9■■□□□ 1.42
SYNE4-207ENST00000505054 PHRF1Q9P1Y6 1649 aaKnown RBP23.89■■□□□ 1.42
SYNE4-207ENST00000505054 A0A0G2JS52 829 aa23.89■■□□□ 1.41
SYNE4-207ENST00000505054 MYT1Q01538 1121 aa23.89■■□□□ 1.41
SYNE4-207ENST00000505054 BTG4Q9NY30 223 aa23.88■■□□□ 1.41
SYNE4-207ENST00000505054 ATP7BP35670 1465 aa23.87■■□□□ 1.41
SYNE4-207ENST00000505054 TNS1Q9HBL0 1735 aaKnown RBP23.87■■□□□ 1.41
SYNE4-207ENST00000505054 TOPAZ1Q8N9V7 1692 aa23.86■■□□□ 1.41
SYNE4-207ENST00000505054 FAM98CQ17RN3 349 aaKnown RBP23.86■■□□□ 1.41
SYNE4-207ENST00000505054 BAG6P46379 1132 aa23.85■■□□□ 1.41
SYNE4-207ENST00000505054 CDK19Q9BWU1 502 aa23.83■■□□□ 1.41
SYNE4-207ENST00000505054 SPATA31A5Q5VU36 1347 aa23.83■■□□□ 1.4
SYNE4-207ENST00000505054 SPATA31A7Q8IWB4 1347 aa23.83■■□□□ 1.4
SYNE4-207ENST00000505054 USP47Q96K76 1375 aa23.82■■□□□ 1.4
SYNE4-207ENST00000505054 SBNO2Q9Y2G9 1366 aa23.82■■□□□ 1.4
SYNE4-207ENST00000505054 NGDNQ8NEJ9 315 aaKnown RBP23.82■■□□□ 1.4
SYNE4-207ENST00000505054 DISP2A7MBM2 1401 aa23.8■■□□□ 1.4
SYNE4-207ENST00000505054 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
SYNE4-207ENST00000505054 PRDM11Q9NQV5 511 aa23.79■■□□□ 1.4
SYNE4-207ENST00000505054 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
SYNE4-207ENST00000505054 NUDT16Q96DE0 195 aaKnown RBP23.78■■□□□ 1.4
SYNE4-207ENST00000505054 NRKQ7Z2Y5 1582 aa23.77■■□□□ 1.4
SYNE4-207ENST00000505054 TESK2Q96S53 571 aa23.76■■□□□ 1.39
SYNE4-207ENST00000505054 CABP2Q9NPB3 220 aa23.76■■□□□ 1.39
SYNE4-207ENST00000505054 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
SYNE4-207ENST00000505054 KIAA0232Q92628 1395 aa23.76■■□□□ 1.39
SYNE4-207ENST00000505054 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
SYNE4-207ENST00000505054 PSDA5PKW4 1024 aaPredicted RBP23.74■■□□□ 1.39
SYNE4-207ENST00000505054 SPATA31A1Q5TZJ5 1347 aa23.74■■□□□ 1.39
SYNE4-207ENST00000505054 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
SYNE4-207ENST00000505054 EN1Q05925 392 aaPredicted RBP23.72■■□□□ 1.39
SYNE4-207ENST00000505054 FAM182BQ5T319 152 aa23.72■■□□□ 1.39
SYNE4-207ENST00000505054 LMO7Q8WWI1 1683 aa23.71■■□□□ 1.39
SYNE4-207ENST00000505054 CCDC61Q9Y6R9 512 aa23.71■■□□□ 1.39
SYNE4-207ENST00000505054 RREB1Q92766 1687 aa23.7■■□□□ 1.38
SYNE4-207ENST00000505054 PPIP5K1Q6PFW1 1433 aa23.69■■□□□ 1.38
SYNE4-207ENST00000505054 SSH2Q76I76 1423 aa23.68■■□□□ 1.38
SYNE4-207ENST00000505054 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
SYNE4-207ENST00000505054 PLEKHG3A1L390 1219 aa23.67■■□□□ 1.38
SYNE4-207ENST00000505054 STRN4Q9NRL3 753 aa23.67■■□□□ 1.38
SYNE4-207ENST00000505054 ACEP12821 1306 aa23.66■■□□□ 1.38
SYNE4-207ENST00000505054 CAMTA1Q9Y6Y1 1673 aa23.65■■□□□ 1.38
SYNE4-207ENST00000505054 ZC3H6P61129 1189 aaKnown RBP23.65■■□□□ 1.38
SYNE4-207ENST00000505054 CPDO75976 1380 aa23.65■■□□□ 1.38
SYNE4-207ENST00000505054 PARD3Q8TEW0 1356 aa23.65■■□□□ 1.38
SYNE4-207ENST00000505054 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.38
SYNE4-207ENST00000505054 PARP4Q9UKK3 1724 aaKnown RBP23.64■■□□□ 1.38
SYNE4-207ENST00000505054 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.37
SYNE4-207ENST00000505054 FAM196AQ6ZSG2 479 aa23.64■■□□□ 1.37
SYNE4-207ENST00000505054 USP19O94966 1318 aa23.63■■□□□ 1.37
SYNE4-207ENST00000505054 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
SYNE4-207ENST00000505054 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
SYNE4-207ENST00000505054 R3HDM1Q15032 1099 aaKnown RBP23.63■■□□□ 1.37
SYNE4-207ENST00000505054 CABP1Q9NZU7 370 aa23.63■■□□□ 1.37
SYNE4-207ENST00000505054 EZH2Q15910 746 aaKnown RBP23.62■■□□□ 1.37
SYNE4-207ENST00000505054 BARGINQ6ZT62 677 aa23.62■■□□□ 1.37
SYNE4-207ENST00000505054 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
SYNE4-207ENST00000505054 TRIM37O94972 964 aa23.61■■□□□ 1.37
SYNE4-207ENST00000505054 TMF1P82094 1093 aa23.6■■□□□ 1.37
SYNE4-207ENST00000505054 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
SYNE4-207ENST00000505054 CAMKK2Q96RR4 588 aa23.6■■□□□ 1.37
SYNE4-207ENST00000505054 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
SYNE4-207ENST00000505054 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
SYNE4-207ENST00000505054 EVA1CP58658 441 aa23.58■■□□□ 1.37
SYNE4-207ENST00000505054 COL5A2P05997 1499 aaPredicted RBP23.57■■□□□ 1.36
SYNE4-207ENST00000505054 BRD4O60885 1362 aaPredicted RBP23.57■■□□□ 1.36
SYNE4-207ENST00000505054 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
SYNE4-207ENST00000505054 APBA3O96018 575 aa23.56■■□□□ 1.36
SYNE4-207ENST00000505054 PDE3BQ13370 1112 aa23.56■■□□□ 1.36
SYNE4-207ENST00000505054 LARP1Q6PKG0 1096 aaKnown RBP23.56■■□□□ 1.36
SYNE4-207ENST00000505054 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
SYNE4-207ENST00000505054 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
SYNE4-207ENST00000505054 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
SYNE4-207ENST00000505054 NLRP13Q86W25 1043 aa23.55■■□□□ 1.36
SYNE4-207ENST00000505054 USP6P35125 1406 aa23.55■■□□□ 1.36
SYNE4-207ENST00000505054 CPSF1Q10570 1443 aaKnown RBP23.55■■□□□ 1.36
SYNE4-207ENST00000505054 CD163L1Q9NR16 1453 aa23.55■■□□□ 1.36
SYNE4-207ENST00000505054 LRRC37A3O60309 1634 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms