RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
RNF4-206ENST00000504782 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
RNF4-206ENST00000504782 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
RNF4-206ENST00000504782 VPS72Q15906 364 aa18.49■□□□□ 0.55
RNF4-206ENST00000504782 ACEP12821 1306 aa18.49■□□□□ 0.55
RNF4-206ENST00000504782 COL14A1Q05707 1796 aaKnown RBP18.48■□□□□ 0.55
RNF4-206ENST00000504782 NUTM2GQ5VZR2 741 aa18.48■□□□□ 0.55
RNF4-206ENST00000504782 PHRF1Q9P1Y6 1649 aaKnown RBP18.48■□□□□ 0.55
RNF4-206ENST00000504782 CENPJQ9HC77 1338 aaPredicted RBP18.47■□□□□ 0.55
RNF4-206ENST00000504782 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
RNF4-206ENST00000504782 NBPF8Q3BBV2 869 aa18.46■□□□□ 0.55
RNF4-206ENST00000504782 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
RNF4-206ENST00000504782 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
RNF4-206ENST00000504782 CCDC9Q9Y3X0 531 aaKnown RBP18.46■□□□□ 0.55
RNF4-206ENST00000504782 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
RNF4-206ENST00000504782 EP400Q96L91 3159 aa18.46■□□□□ 0.55
RNF4-206ENST00000504782 SEPT12Q8IYM1 358 aa18.45■□□□□ 0.54
RNF4-206ENST00000504782 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
RNF4-206ENST00000504782 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
RNF4-206ENST00000504782 PPIP5K1Q6PFW1 1433 aa18.42■□□□□ 0.54
RNF4-206ENST00000504782 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
RNF4-206ENST00000504782 CHRNA2Q15822 529 aa18.42■□□□□ 0.54
RNF4-206ENST00000504782 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
RNF4-206ENST00000504782 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
RNF4-206ENST00000504782 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
RNF4-206ENST00000504782 PRDM11Q9NQV5 511 aa18.4■□□□□ 0.54
RNF4-206ENST00000504782 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
RNF4-206ENST00000504782 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
RNF4-206ENST00000504782 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
RNF4-206ENST00000504782 KRT27Q7Z3Y8 459 aa18.37■□□□□ 0.53
RNF4-206ENST00000504782 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
RNF4-206ENST00000504782 SPATA31A5Q5VU36 1347 aa18.37■□□□□ 0.53
RNF4-206ENST00000504782 SPATA31A7Q8IWB4 1347 aa18.37■□□□□ 0.53
RNF4-206ENST00000504782 A0A0G2JS52 829 aa18.35■□□□□ 0.53
RNF4-206ENST00000504782 MYT1Q01538 1121 aa18.35■□□□□ 0.53
RNF4-206ENST00000504782 FAM182BQ5T319 152 aa18.35■□□□□ 0.53
RNF4-206ENST00000504782 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
RNF4-206ENST00000504782 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
RNF4-206ENST00000504782 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
RNF4-206ENST00000504782 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
RNF4-206ENST00000504782 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
RNF4-206ENST00000504782 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
RNF4-206ENST00000504782 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
RNF4-206ENST00000504782 USP19O94966 1318 aa18.33■□□□□ 0.53
RNF4-206ENST00000504782 USP6P35125 1406 aa18.32■□□□□ 0.52
RNF4-206ENST00000504782 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
RNF4-206ENST00000504782 PIK3C2AO00443 1686 aa18.32■□□□□ 0.52
RNF4-206ENST00000504782 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
RNF4-206ENST00000504782 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
RNF4-206ENST00000504782 SSH2Q76I76 1423 aa18.31■□□□□ 0.52
RNF4-206ENST00000504782 GCP02774 474 aa18.3■□□□□ 0.52
RNF4-206ENST00000504782 NLRP13Q86W25 1043 aa18.29■□□□□ 0.52
RNF4-206ENST00000504782 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
RNF4-206ENST00000504782 CPDO75976 1380 aa18.29■□□□□ 0.52
RNF4-206ENST00000504782 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
RNF4-206ENST00000504782 EVA1CP58658 441 aa18.27■□□□□ 0.52
RNF4-206ENST00000504782 NLRP6P59044 892 aa18.27■□□□□ 0.52
RNF4-206ENST00000504782 ZRANB1Q9UGI0 708 aa18.27■□□□□ 0.52
RNF4-206ENST00000504782 SLIT3O75094 1523 aa18.27■□□□□ 0.51
RNF4-206ENST00000504782 ZBTB7CA1YPR0 619 aa18.26■□□□□ 0.51
RNF4-206ENST00000504782 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
RNF4-206ENST00000504782 COL18A1P39060 1754 aa18.26■□□□□ 0.51
RNF4-206ENST00000504782 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
RNF4-206ENST00000504782 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
RNF4-206ENST00000504782 RGPD1P0DJD0 1748 aa18.25■□□□□ 0.51
RNF4-206ENST00000504782 TNS1Q9HBL0 1735 aaKnown RBP18.25■□□□□ 0.51
RNF4-206ENST00000504782 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
RNF4-206ENST00000504782 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
RNF4-206ENST00000504782 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
RNF4-206ENST00000504782 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
RNF4-206ENST00000504782 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
RNF4-206ENST00000504782 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
RNF4-206ENST00000504782 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
RNF4-206ENST00000504782 CD163L1Q9NR16 1453 aa18.21■□□□□ 0.51
RNF4-206ENST00000504782 AXIN2Q9Y2T1 843 aa18.21■□□□□ 0.51
RNF4-206ENST00000504782 SBNO2Q9Y2G9 1366 aa18.2■□□□□ 0.5
RNF4-206ENST00000504782 SOX12O15370 315 aa18.2■□□□□ 0.5
RNF4-206ENST00000504782 EN1Q05925 392 aaPredicted RBP18.2■□□□□ 0.5
RNF4-206ENST00000504782 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
RNF4-206ENST00000504782 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
RNF4-206ENST00000504782 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
RNF4-206ENST00000504782 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
RNF4-206ENST00000504782 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
RNF4-206ENST00000504782 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
RNF4-206ENST00000504782 TRIM37O94972 964 aa18.17■□□□□ 0.5
RNF4-206ENST00000504782 BAG6P46379 1132 aa18.17■□□□□ 0.5
RNF4-206ENST00000504782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
RNF4-206ENST00000504782 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
RNF4-206ENST00000504782 NFAT5O94916 1531 aa18.17■□□□□ 0.5
RNF4-206ENST00000504782 WNK3Q9BYP7 1800 aa18.16■□□□□ 0.5
RNF4-206ENST00000504782 CRB1P82279 1406 aa18.16■□□□□ 0.5
RNF4-206ENST00000504782 ARHGEF25Q86VW2 580 aa18.16■□□□□ 0.5
RNF4-206ENST00000504782 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
RNF4-206ENST00000504782 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
RNF4-206ENST00000504782 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
RNF4-206ENST00000504782 TMC1Q8TDI8 760 aa18.15■□□□□ 0.5
RNF4-206ENST00000504782 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
RNF4-206ENST00000504782 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
RNF4-206ENST00000504782 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.49
RNF4-206ENST00000504782 NME9Q86XW9 330 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms