RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
TRIO-206ENST00000504606 ANKRD26Q9UPS8 1709 aa15.43■□□□□ 0.06
TRIO-206ENST00000504606 FYB1O15117 783 aa15.43■□□□□ 0.06
TRIO-206ENST00000504606 BRINP3Q76B58 766 aa15.43■□□□□ 0.06
TRIO-206ENST00000504606 TTC21AQ8NDW8 1320 aa15.43■□□□□ 0.06
TRIO-206ENST00000504606 BRD4O60885 1362 aaPredicted RBP15.42■□□□□ 0.06
TRIO-206ENST00000504606 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
TRIO-206ENST00000504606 NME9Q86XW9 330 aa15.42■□□□□ 0.06
TRIO-206ENST00000504606 PAK3O75914 559 aaPredicted RBP15.41■□□□□ 0.06
TRIO-206ENST00000504606 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
TRIO-206ENST00000504606 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
TRIO-206ENST00000504606 NPHP3Q7Z494 1330 aa15.41■□□□□ 0.06
TRIO-206ENST00000504606 IQSEC2Q5JU85 1478 aa15.4■□□□□ 0.06
TRIO-206ENST00000504606 DDX17Q92841 729 aaKnown RBP15.4■□□□□ 0.06
TRIO-206ENST00000504606 MYBBP1AQ9BQG0 1328 aaKnown RBP15.4■□□□□ 0.06
TRIO-206ENST00000504606 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
TRIO-206ENST00000504606 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
TRIO-206ENST00000504606 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
TRIO-206ENST00000504606 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
TRIO-206ENST00000504606 TOM1O60784 492 aa15.38■□□□□ 0.05
TRIO-206ENST00000504606 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
TRIO-206ENST00000504606 COG3Q96JB2 828 aa15.38■□□□□ 0.05
TRIO-206ENST00000504606 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
TRIO-206ENST00000504606 TNNT2P45379 298 aaPredicted RBP15.37■□□□□ 0.05
TRIO-206ENST00000504606 ABTB2Q8N961 1025 aa15.37■□□□□ 0.05
TRIO-206ENST00000504606 ROBO1Q9Y6N7 1651 aa15.37■□□□□ 0.05
TRIO-206ENST00000504606 NHSL1Q5SYE7 1610 aa15.36■□□□□ 0.05
TRIO-206ENST00000504606 OVOS2A0A0J9YW53 1432 aa15.36■□□□□ 0.05
TRIO-206ENST00000504606 OVOS2Q6IE36 1432 aa15.36■□□□□ 0.05
TRIO-206ENST00000504606 PXDNQ92626 1479 aa15.36■□□□□ 0.05
TRIO-206ENST00000504606 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
TRIO-206ENST00000504606 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
TRIO-206ENST00000504606 NLRP6P59044 892 aa15.35■□□□□ 0.05
TRIO-206ENST00000504606 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
TRIO-206ENST00000504606 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
TRIO-206ENST00000504606 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
TRIO-206ENST00000504606 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
TRIO-206ENST00000504606 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
TRIO-206ENST00000504606 SOS2Q07890 1332 aaPredicted RBP15.34■□□□□ 0.05
TRIO-206ENST00000504606 USP54Q70EL1 1684 aa15.34■□□□□ 0.05
TRIO-206ENST00000504606 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
TRIO-206ENST00000504606 PIP4K2BP78356 416 aa15.33■□□□□ 0.04
TRIO-206ENST00000504606 MRS2Q9HD23 443 aa15.33■□□□□ 0.04
TRIO-206ENST00000504606 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
TRIO-206ENST00000504606 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
TRIO-206ENST00000504606 MARF1Q9Y4F3 1742 aaKnown RBP15.32■□□□□ 0.04
TRIO-206ENST00000504606 AHDC1Q5TGY3 1603 aaPredicted RBP15.32■□□□□ 0.04
TRIO-206ENST00000504606 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
TRIO-206ENST00000504606 SOX12O15370 315 aa15.3■□□□□ 0.04
TRIO-206ENST00000504606 FBLN1P23142 703 aa15.3■□□□□ 0.04
TRIO-206ENST00000504606 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
TRIO-206ENST00000504606 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
TRIO-206ENST00000504606 MTHFSP49914 203 aa15.29■□□□□ 0.04
TRIO-206ENST00000504606 MAP2P11137 1827 aaKnown RBP15.29■□□□□ 0.04
TRIO-206ENST00000504606 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
TRIO-206ENST00000504606 PHLPP1O60346 1717 aa15.27■□□□□ 0.04
TRIO-206ENST00000504606 POLKQ9UBT6 870 aa15.27■□□□□ 0.04
TRIO-206ENST00000504606 SLIT3O75094 1523 aa15.27■□□□□ 0.03
TRIO-206ENST00000504606 USP19O94966 1318 aa15.26■□□□□ 0.03
TRIO-206ENST00000504606 RRS1Q15050 365 aaKnown RBP15.26■□□□□ 0.03
TRIO-206ENST00000504606 KCNH5Q8NCM2 988 aa15.26■□□□□ 0.03
TRIO-206ENST00000504606 CFAP53Q96M91 514 aa15.26■□□□□ 0.03
TRIO-206ENST00000504606 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
TRIO-206ENST00000504606 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
TRIO-206ENST00000504606 PPM1GO15355 546 aaPredicted RBP15.25■□□□□ 0.03
TRIO-206ENST00000504606 SMG6Q86US8 1419 aaKnown RBP15.25■□□□□ 0.03
TRIO-206ENST00000504606 COL16A1Q07092 1604 aaPredicted RBP15.25■□□□□ 0.03
TRIO-206ENST00000504606 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
TRIO-206ENST00000504606 NFAT5O94916 1531 aa15.24■□□□□ 0.03
TRIO-206ENST00000504606 LRRC59Q96AG4 307 aaKnown RBP15.24■□□□□ 0.03
TRIO-206ENST00000504606 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
TRIO-206ENST00000504606 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
TRIO-206ENST00000504606 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
TRIO-206ENST00000504606 GCP02774 474 aa15.23■□□□□ 0.03
TRIO-206ENST00000504606 FAM9BQ8IZU0 186 aa15.23■□□□□ 0.03
TRIO-206ENST00000504606 CABLES1Q8TDN4 633 aa15.23■□□□□ 0.03
TRIO-206ENST00000504606 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
TRIO-206ENST00000504606 PEAK1Q9H792 1746 aa15.22■□□□□ 0.03
TRIO-206ENST00000504606 LTN1O94822 1766 aa15.21■□□□□ 0.03
TRIO-206ENST00000504606 ZBTB7CA1YPR0 619 aa15.21■□□□□ 0.03
TRIO-206ENST00000504606 AMPHP49418 695 aa15.21■□□□□ 0.03
TRIO-206ENST00000504606 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
TRIO-206ENST00000504606 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
TRIO-206ENST00000504606 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
TRIO-206ENST00000504606 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
TRIO-206ENST00000504606 SHPRHQ149N8 1683 aa15.19■□□□□ 0.02
TRIO-206ENST00000504606 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRIO-206ENST00000504606 INSRP06213 1382 aa15.19■□□□□ 0.02
TRIO-206ENST00000504606 FLT4P35916 1363 aa15.19■□□□□ 0.02
TRIO-206ENST00000504606 KIF24Q5T7B8 1368 aa15.19■□□□□ 0.02
TRIO-206ENST00000504606 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
TRIO-206ENST00000504606 DIAPH1O60610 1272 aaKnown RBP15.18■□□□□ 0.02
TRIO-206ENST00000504606 ZC3H6P61129 1189 aaKnown RBP15.18■□□□□ 0.02
TRIO-206ENST00000504606 ARHGEF25Q86VW2 580 aa15.18■□□□□ 0.02
TRIO-206ENST00000504606 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
TRIO-206ENST00000504606 HOXC9P31274 260 aa15.17■□□□□ 0.02
TRIO-206ENST00000504606 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
TRIO-206ENST00000504606 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
TRIO-206ENST00000504606 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
TRIO-206ENST00000504606 U2SURPO15042 1029 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms